Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 8.8e-78 293.5 144 100.0
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 5.9e-74 280.8 144 94.4
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 1.6e-55 219.5 142 71.8
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 8.0e-55 217.2 148 70.3
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 2.3e-54 215.7 148 70.3
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 8.9e-54 213.8 145 70.3
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.2e-53 213.4 142 72.5
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.4e-53 211.8 140 72.9
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 7.5e-53 210.7 146 69.2
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 9.8e-53 210.3 146 71.9
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.3e-52 209.9 146 69.9
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.3e-52 209.9 145 72.4
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.3e-52 209.9 146 69.2
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.3e-52 209.9 146 69.2
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.2e-52 209.1 148 68.2
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 2.2e-52 209.1 146 71.2
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 3.7e-52 208.4 143 71.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 3.7e-52 208.4 145 69.7
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 3.7e-52 208.4 141 70.9
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 3.7e-52 208.4 146 68.5
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 4.9e-52 208.0 146 69.2
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 8.3e-52 207.2 141 70.2
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 8.3e-52 207.2 148 69.6
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 8.3e-52 207.2 145 71.0
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.1e-51 206.8 146 68.5
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.1e-51 206.8 146 68.5
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.1e-51 206.8 147 66.7
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.4e-51 206.5 146 69.2
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 1.4e-51 206.5 146 68.5
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 1.4e-51 206.5 115 77.4
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.8e-51 206.1 134 72.4
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.4e-51 205.7 143 69.9
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 4.1e-51 204.9 146 68.5
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 4.1e-51 204.9 146 68.5
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 4.1e-51 204.9 149 67.8
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 4.1e-51 204.9 152 65.8
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 5.4e-51 204.5 151 66.9
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 7.0e-51 204.1 145 69.7
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 7.0e-51 204.1 145 67.6
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 7.0e-51 204.1 145 68.3
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 9.2e-51 203.8 146 67.8
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 9.2e-51 203.8 146 67.8
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 9.2e-51 203.8 146 67.8
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 9.2e-51 203.8 143 72.0
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 9.2e-51 203.8 152 65.1
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 9.2e-51 203.8 147 66.7
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 1.2e-50 203.4 146 68.5
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 1.6e-50 203.0 145 69.7
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.6e-50 203.0 143 67.8
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 1.6e-50 203.0 141 69.5
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 2.0e-50 202.6 149 66.4
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.0e-50 202.6 152 65.1
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 2.7e-50 202.2 149 67.1
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 3.5e-50 201.8 146 67.8
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 3.5e-50 201.8 140 68.6
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 4.6e-50 201.4 146 67.8
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 4.6e-50 201.4 146 67.8
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.6e-50 201.4 150 66.7
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 6.0e-50 201.1 143 68.5
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 6.0e-50 201.1 149 65.1
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.0e-49 200.3 150 67.3
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.0e-49 200.3 144 65.3
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.0e-49 200.3 141 68.8
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 1.3e-49 199.9 144 66.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.7e-49 199.5 149 65.8
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 3.9e-49 198.4 145 66.2
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 8.6e-49 197.2 140 68.6
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.1e-48 196.8 141 66.7
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.5e-48 196.4 141 68.1
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 1.5e-48 196.4 144 67.4
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 2.5e-48 195.7 134 70.9
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 3.3e-48 195.3 149 63.1
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 3.3e-48 195.3 142 69.7
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 9.5e-48 193.7 143 65.0
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 9.5e-48 193.7 147 64.6
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.2e-47 193.4 114 75.4
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.1e-47 192.6 178 57.3
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.6e-47 191.8 147 63.9
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 3.6e-47 191.8 147 63.9
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 3.6e-47 191.8 144 67.4
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 4.7e-47 191.4 113 74.3
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 8.0e-47 190.7 136 68.4
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 8.0e-47 190.7 143 67.8
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.8e-46 189.5 143 67.8
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.1e-46 188.7 143 67.1
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 3.1e-46 188.7 139 66.9
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 5.2e-46 188.0 144 66.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 6.8e-46 187.6 136 66.9
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 6.8e-46 187.6 143 67.1
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 8.9e-46 187.2 139 66.2
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.2e-45 186.8 115 73.0
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.2e-45 186.8 141 63.1
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 1.5e-45 186.4 143 67.1
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 2.0e-45 186.0 145 66.9
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.0e-45 186.0 145 64.1
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 2.0e-45 186.0 134 69.4
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.6e-45 185.7 143 65.0
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.6e-45 185.7 143 65.7
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 5.8e-45 184.5 143 62.9
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 7.5e-45 184.1 150 63.3
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 9.8e-45 183.7 141 63.1
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 2.2e-44 182.6 140 65.0
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 8.3e-44 180.6 148 62.8
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 1.1e-43 180.3 130 68.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.9e-43 179.5 144 66.0
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 2.4e-43 179.1 116 70.7
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 4.6e-42 174.9 146 61.6
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 7.8e-42 174.1 107 72.9
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 5.0e-41 171.4 145 62.1
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 9.5e-40 167.2 146 57.5
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 8.1e-39 164.1 119 65.5
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.1e-38 162.2 118 70.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 7.5e-37 157.5 89 78.7
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 4.9e-36 154.8 89 77.5
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.4e-35 153.3 87 77.0
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 2.1e-34 149.4 110 70.0
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 3.0e-33 145.6 117 67.5
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.3e-32 142.1 119 66.4
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.6e-31 139.8 120 57.5
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.4e-30 136.7 108 64.8
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.7e-28 129.8 121 61.2
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 1.9e-27 126.3 119 62.2
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.5e-26 122.1 113 58.4
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 6.0e-26 121.3 102 59.8
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 7.8e-26 120.9 144 47.9
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 5.1e-25 118.2 89 68.5
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 7.6e-21 104.4 91 54.9
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 3.9e-17 92.0 104 43.3
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 2.5e-16 89.4 89 51.7
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.9e-11 73.2 73 54.8
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 5.4e-11 71.6 72 59.7
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.6e-10 70.1 157 31.8
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 2.3e-09 66.2 72 58.3
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.4e-08 61.2 67 49.3


User provided reference genes

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