Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.3e-85 319.7 160 100.0
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 4.9e-21 105.1 138 47.1
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.9e-21 105.1 59 84.7
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.3e-18 97.1 59 76.3
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.3e-18 96.3 57 78.9
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.3e-18 96.3 57 78.9
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 2.3e-18 96.3 195 37.9
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 3.0e-18 95.9 65 69.2
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 3.0e-18 95.9 54 81.5
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 3.0e-18 95.9 65 67.7
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 3.0e-18 95.9 54 81.5
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 3.0e-18 95.9 57 78.9
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 3.9e-18 95.5 59 74.6
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 3.9e-18 95.5 59 72.9
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 5.1e-18 95.1 59 74.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 5.1e-18 95.1 59 74.6
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 5.1e-18 95.1 57 77.2
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 5.1e-18 95.1 63 71.4
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 5.1e-18 95.1 57 77.2
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 6.7e-18 94.7 59 74.6
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 6.7e-18 94.7 66 71.2
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 6.7e-18 94.7 57 77.2
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 6.7e-18 94.7 57 77.2
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 8.7e-18 94.4 195 37.9
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 8.7e-18 94.4 63 71.4
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 8.7e-18 94.4 59 72.9
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 8.7e-18 94.4 181 37.0
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 8.7e-18 94.4 195 35.9
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 1.1e-17 94.0 65 67.7
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.1e-17 94.0 57 75.4
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.1e-17 94.0 54 83.3
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 1.1e-17 94.0 63 69.8
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 1.1e-17 94.0 200 38.0
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.1e-17 94.0 63 69.8
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.1e-17 94.0 197 35.5
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.5e-17 93.6 57 75.4
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.5e-17 93.6 57 75.4
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.5e-17 93.6 57 75.4
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.5e-17 93.6 57 75.4
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.5e-17 93.6 62 74.2
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.9e-17 93.2 63 69.8
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-17 93.2 63 69.8
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-17 93.2 63 69.8
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.9e-17 93.2 63 69.8
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 1.9e-17 93.2 63 69.8
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.9e-17 93.2 59 72.9
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.9e-17 93.2 60 71.7
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 1.9e-17 93.2 199 37.7
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.9e-17 93.2 57 75.4
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 1.9e-17 93.2 61 70.5
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.9e-17 93.2 136 43.4
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 1.9e-17 93.2 63 69.8
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 2.5e-17 92.8 114 47.4
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.5e-17 92.8 57 75.4
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 2.5e-17 92.8 54 79.6
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 2.5e-17 92.8 54 79.6
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.5e-17 92.8 57 75.4
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 2.5e-17 92.8 57 73.7
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 2.5e-17 92.8 59 72.9
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 2.5e-17 92.8 60 75.0
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 3.3e-17 92.4 63 68.3
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 3.3e-17 92.4 57 75.4
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 3.3e-17 92.4 122 45.1
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 3.3e-17 92.4 59 72.9
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 4.3e-17 92.0 181 35.9
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 4.3e-17 92.0 181 35.9
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.3e-17 92.0 57 75.4
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 4.3e-17 92.0 57 75.4
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.3e-17 92.0 57 75.4
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 4.3e-17 92.0 56 76.8
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 4.3e-17 92.0 137 43.1
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 4.3e-17 92.0 60 70.0
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 5.6e-17 91.7 57 75.4
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 5.6e-17 91.7 178 37.1
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 5.6e-17 91.7 178 37.1
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 5.6e-17 91.7 60 71.7
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.6e-17 91.7 54 79.6
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 5.6e-17 91.7 63 69.8
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 5.6e-17 91.7 59 71.2
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 5.6e-17 91.7 54 77.8
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 1.3e-16 90.5 57 73.7
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.3e-16 90.5 195 37.4
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.3e-16 90.5 57 73.7
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 1.3e-16 90.5 112 47.3
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.3e-16 90.5 54 77.8
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.6e-16 90.1 57 73.7
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 1.6e-16 90.1 120 45.0
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 1.6e-16 90.1 120 45.0
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 2.1e-16 89.7 192 36.5
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.1e-16 89.7 63 65.1
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 2.1e-16 89.7 53 77.4
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 2.8e-16 89.4 199 37.7
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 2.8e-16 89.4 51 80.4
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.8e-16 89.4 197 38.6
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 2.8e-16 89.4 200 35.5
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 4.8e-16 88.6 51 80.4
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 4.8e-16 88.6 56 75.0
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 4.8e-16 88.6 51 82.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 4.8e-16 88.6 54 75.9
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 6.2e-16 88.2 121 45.5
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 6.2e-16 88.2 121 45.5
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 6.2e-16 88.2 56 76.8
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 8.2e-16 87.8 57 70.2
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.1e-15 87.4 59 72.9
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.1e-15 87.4 59 72.9
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.1e-15 87.4 59 72.9
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.4e-15 87.0 51 78.4
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 2.4e-15 86.3 59 72.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 3.1e-15 85.9 57 71.9
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 3.1e-15 85.9 53 75.5
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 3.1e-15 85.9 122 44.3
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 4.0e-15 85.5 53 75.5
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 4.0e-15 85.5 53 75.5
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 6.9e-15 84.7 177 34.5
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 2.0e-14 83.2 59 64.4
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 3.8e-13 79.0 51 70.6
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 8.4e-13 77.8 54 64.8
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-12 77.4 49 75.5
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 1.9e-12 76.6 56 58.9
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.5e-12 76.3 49 75.5
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.2e-12 75.5 49 73.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 9.7e-09 64.3 62 54.8


User provided reference genes

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