Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1246 Ceratophyllum demersum HOM05D001074 ORTHO05D001188 9.5e-136 486.9 253 100.0
CDE02G1943 Ceratophyllum demersum HOM05D001074 ORTHO05D001188 1.9e-22 110.5 256 37.9
HPP92_021523 Vanilla planifolia HOM05D001074 ORTHO05D001188 2.8e-18 96.7 319 33.2
Nn1g00291 Nelumbo nucifera HOM05D001074 ORTHO05D001188 6.8e-17 92.0 299 31.8
QL09p008639 Quercus lobata HOM05D001074 ORTHO05D001188 2.9e-15 86.7 331 30.2
HPP92_021497 Vanilla planifolia HOM05D001074 ORTHO05D001188 4.9e-15 85.9 279 33.7
Aa31LG11G3550 Aethionema arabicum HOM05D001074 ORTHO05D001188 2.4e-14 83.6 314 30.6
Manes.01G184800 Manihot esculenta HOM05D001074 ORTHO05D001188 3.2e-14 83.2 316 31.3
Sc13g0009950 Simmondsia chinensis HOM05D001074 ORTHO05D001188 5.4e-14 82.4 326 29.1
AUR62006080 Chenopodium quinoa HOM05D001074 ORTHO05D001188 2.1e-13 80.5 325 31.7
Sed0019891 Sechium edule HOM05D001074 ORTHO05D001188 2.1e-13 80.5 323 30.0
Manes.02G006800 Manihot esculenta HOM05D001074 ORTHO05D001188 3.5e-13 79.7 304 29.6
MBI06_g36470_MAGBIO Magnolia biondii HOM05D001074 ORTHO05D001188 4.6e-13 79.3 344 29.7
Hund11651 Selenicereus undatus HOM05D001074 ORTHO05D001188 6.0e-13 79.0 312 31.7
Dinv29266 Davidia involucrata HOM05D001074 ORTHO05D001188 1.3e-12 77.8 306 30.7
FAN03G0931 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.3e-12 77.8 281 32.4
PGR142G0617 Punica granatum HOM05D001074 ORTHO05D001188 1.7e-12 77.4 334 28.7
Sed0019067 Sechium edule HOM05D001074 ORTHO05D001188 1.7e-12 77.4 319 31.3
Haze_00199 Corylus avellana HOM05D001074 ORTHO05D001188 2.3e-12 77.0 333 29.4
FvH4_7g31960 Fragaria vesca HOM05D001074 ORTHO05D001188 2.3e-12 77.0 311 30.2
Prupe.2G312800 Prunus persica HOM05D001074 ORTHO05D001188 2.3e-12 77.0 314 30.3
TAR374G1588 Trochodendron aralioides HOM05D001074 ORTHO05D001188 2.3e-12 77.0 328 30.8
Ciclev10021975m.g Citrus clementina HOM05D001074 ORTHO05D001188 3.0e-12 76.6 267 32.2
MD07G1293000 Malus domestica HOM05D001074 ORTHO05D001188 3.0e-12 76.6 333 30.3
Nn3g18953 Nelumbo nucifera HOM05D001074 ORTHO05D001188 3.0e-12 76.6 306 30.7
Phvul.009G051500 Phaseolus vulgaris HOM05D001074 ORTHO05D001188 3.0e-12 76.6 329 29.2
EL10Ac3g05268 Beta vulgaris HOM05D001074 ORTHO05D001188 5.1e-12 75.9 330 29.7
Hma1.2p1_0440F.1_g153580 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 5.1e-12 75.9 332 30.7
FAN10G1322 Fragaria x ananassa HOM05D001074 ORTHO05D001188 6.6e-12 75.5 311 29.9
FAN10G3632 Fragaria x ananassa HOM05D001074 ORTHO05D001188 6.6e-12 75.5 311 29.9
PGR042G1177 Punica granatum HOM05D001074 ORTHO05D001188 8.7e-12 75.1 268 32.1
VMungo1309G0031 Vigna mungo HOM05D001074 ORTHO05D001188 8.7e-12 75.1 329 29.2
MSTRG.8646 Avicennia marina HOM05D001074 ORTHO05D001188 1.1e-11 74.7 312 31.1
THA.LOC104798904 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 1.1e-11 74.7 315 30.2
AT3G49290 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 1.5e-11 74.3 310 32.3
Sabra12G0015500 Salix brachista HOM05D001074 ORTHO05D001188 1.5e-11 74.3 323 29.1
CANSAT21G0656 Cannabis sativa HOM05D001074 ORTHO05D001188 1.9e-11 73.9 329 31.0
CiPaw.05G197800 Carya illinoinensis HOM05D001074 ORTHO05D001188 1.9e-11 73.9 328 30.2
Glyma.04G234500 Glycine max HOM05D001074 ORTHO05D001188 1.9e-11 73.9 327 30.3
Potri.012G016900 Populus trichocarpa HOM05D001074 ORTHO05D001188 1.9e-11 73.9 331 27.8
Ca_12785_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 2.5e-11 73.6 329 28.9
Eucgr.K00391 Eucalyptus grandis HOM05D001074 ORTHO05D001188 2.5e-11 73.6 327 27.8
arahy.Tifrunner.gnm1.ann1.ADUU08 Arachis hypogaea HOM05D001074 ORTHO05D001188 4.3e-11 72.8 329 31.0
vmacro06391 Vaccinium macrocarpon HOM05D001074 ORTHO05D001188 4.3e-11 72.8 323 31.3
Sp2g23040 Schrenkiella parvula HOM05D001074 ORTHO05D001188 5.6e-11 72.4 316 30.7
Glyma.06G130100 Glycine max HOM05D001074 ORTHO05D001188 7.3e-11 72.0 330 29.7
THA.LOC104814934 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 7.3e-11 72.0 314 29.0
AL5G29020 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 9.6e-11 71.6 309 31.1
Duzib205G0639 Durio zibethinus HOM05D001074 ORTHO05D001188 9.6e-11 71.6 328 31.7
Lalb_Chr11g0066971 Lupinus albus HOM05D001074 ORTHO05D001188 9.6e-11 71.6 329 30.1
Lj1g0025836 Lotus japonicus HOM05D001074 ORTHO05D001188 1.2e-10 71.2 332 29.8
Prupe.5G124400 Prunus persica HOM05D001074 ORTHO05D001188 1.2e-10 71.2 307 27.0
arahy.Tifrunner.gnm1.ann1.T964H7 Arachis hypogaea HOM05D001074 ORTHO05D001188 1.6e-10 70.9 331 29.3
CsaV3_3G019770 Cucumis sativus L. HOM05D001074 ORTHO05D001188 1.6e-10 70.9 327 30.3
Sp5g12810 Schrenkiella parvula HOM05D001074 ORTHO05D001188 1.6e-10 70.9 313 29.4
Carub.0005s1549 Capsella rubella HOM05D001074 ORTHO05D001188 2.1e-10 70.5 306 29.7
Cpa.g.sc3.99 Carica papaya HOM05D001074 ORTHO05D001188 2.1e-10 70.5 320 29.4
CDE09G0404 Ceratophyllum demersum HOM05D001074 ORTHO05D001188 2.1e-10 70.5 304 29.3
MD01G1222400 Malus domestica HOM05D001074 ORTHO05D001188 2.1e-10 70.5 319 29.5
Ah.07g205520 Amaranthus hybridus HOM05D001074 ORTHO05D001188 2.8e-10 70.1 337 29.1
Dinv37499 Davidia involucrata HOM05D001074 ORTHO05D001188 2.8e-10 70.1 290 27.9
Gohir.D09G179700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.8e-10 70.1 316 29.7
Duzib084G1329 Durio zibethinus HOM05D001074 ORTHO05D001188 3.6e-10 69.7 337 29.4
FAN04G3039 Fragaria x ananassa HOM05D001074 ORTHO05D001188 3.6e-10 69.7 274 28.5
Actinidia27308 Actinidia chinensis HOM05D001074 ORTHO05D001188 4.7e-10 69.3 286 29.7
CSS0024412 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 4.7e-10 69.3 325 28.6
Cfa016241 Carpinus fangiana HOM05D001074 ORTHO05D001188 6.2e-10 68.9 323 28.2
Lalb_Chr08g0240151 Lupinus albus HOM05D001074 ORTHO05D001188 6.2e-10 68.9 326 27.6
Oeu023661.1 Olea europaea HOM05D001074 ORTHO05D001188 6.2e-10 68.9 330 28.8
Psat5g076160 Pisum sativum HOM05D001074 ORTHO05D001188 6.2e-10 68.9 331 28.4
Ah.13g070370 Amaranthus hybridus HOM05D001074 ORTHO05D001188 8.1e-10 68.6 282 30.5
TWI39G0168 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 8.1e-10 68.6 324 28.7
ATR0602G020 Amborella trichopoda HOM05D001074 ORTHO05D001188 1.1e-09 68.2 284 29.2
CSS0010942 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 1.1e-09 68.2 328 30.2
AUR62019414 Chenopodium quinoa HOM05D001074 ORTHO05D001188 1.1e-09 68.2 362 27.1
BcaC07g39398 Brassica carinata HOM05D001074 ORTHO05D001188 1.4e-09 67.8 316 30.4
CARHR189190 Cardamine hirsuta HOM05D001074 ORTHO05D001188 1.4e-09 67.8 321 30.5
Cc02_g01400 Coffea canephora HOM05D001074 ORTHO05D001188 1.4e-09 67.8 325 30.2
Glyma.14G138980 Glycine max HOM05D001074 ORTHO05D001188 1.4e-09 67.8 325 28.6
arahy.Tifrunner.gnm1.ann1.B3F4SL Arachis hypogaea HOM05D001074 ORTHO05D001188 1.8e-09 67.4 253 33.2
Carub.0006s2208 Capsella rubella HOM05D001074 ORTHO05D001188 1.8e-09 67.4 318 30.5
MELO3C008503.2 Cucumis melo HOM05D001074 ORTHO05D001188 1.8e-09 67.4 327 29.7
Hma1.2p1_1507F.1_g287650 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 1.8e-09 67.4 329 28.0
C08p24290 Brassica napus HOM05D001074 ORTHO05D001188 2.4e-09 67.0 316 30.4
BolC8t50045H Brassica oleracea HOM05D001074 ORTHO05D001188 2.4e-09 67.0 316 30.4
COL.COLO4_16786 Corchorus olitorius HOM05D001074 ORTHO05D001188 2.4e-09 67.0 306 29.1
AT5G24310 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 3.1e-09 66.6 318 30.5
FAN13G1194 Fragaria x ananassa HOM05D001074 ORTHO05D001188 3.1e-09 66.6 269 26.8
Atru.chr12.2240 Acer truncatum HOM05D001074 ORTHO05D001188 4.0e-09 66.2 313 28.4
ClCG05G009010 Citrullus lanatus HOM05D001074 ORTHO05D001188 4.0e-09 66.2 354 28.8
SalBow4G3282 Salvia bowleyana HOM05D001074 ORTHO05D001188 4.0e-09 66.2 329 29.8
GSVIVG01038564001 Vitis vinifera HOM05D001074 ORTHO05D001188 4.0e-09 66.2 304 29.9
ECA232G2603 Erigeron canadensis HOM05D001074 ORTHO05D001188 5.2e-09 65.9 332 28.0
Gorai.006G201700 Gossypium raimondii HOM05D001074 ORTHO05D001188 5.2e-09 65.9 322 28.9
Lsat_1_v5_gn_8_5340 Lactuca sativa HOM05D001074 ORTHO05D001188 5.2e-09 65.9 310 30.0
Manes.05G190200 Manihot esculenta HOM05D001074 ORTHO05D001188 6.9e-09 65.5 314 29.9
Aqoxy2G00703 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 1.2e-08 64.7 327 29.1
BcaB01g00730 Brassica carinata HOM05D001074 ORTHO05D001188 1.2e-08 64.7 316 29.7
Gohir.A09G184800 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.2e-08 64.7 310 30.0
Gorai.008G268000 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.2e-08 64.7 325 28.9
Medtr3g091760 Medicago truncatula HOM05D001074 ORTHO05D001188 1.2e-08 64.7 336 28.3
SGA_v2.0_scaffold192G40530 Striga asiatica HOM05D001074 ORTHO05D001188 1.2e-08 64.7 259 31.7
A06p35110 Brassica napus HOM05D001074 ORTHO05D001188 1.5e-08 64.3 307 29.3
Duzib068G0581 Durio zibethinus HOM05D001074 ORTHO05D001188 1.5e-08 64.3 314 27.7
Gohir.D12G249900 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.5e-08 64.3 314 29.3
PGSC0003DMG400018548 Solanum tuberosum HOM05D001074 ORTHO05D001188 1.5e-08 64.3 316 27.5
Atru.chr9.1941 Acer truncatum HOM05D001074 ORTHO05D001188 2.0e-08 63.9 299 29.4
CAN.G481.24 Capsicum annuum HOM05D001074 ORTHO05D001188 2.6e-08 63.5 314 29.6
Gohir.A03G051700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.6e-08 63.5 322 27.0
Gorai.003G121700 Gossypium raimondii HOM05D001074 ORTHO05D001188 2.6e-08 63.5 321 26.8
HanXRQChr05g0144191 Helianthus annuus HOM05D001074 ORTHO05D001188 2.6e-08 63.5 317 28.1
A06p18490 Brassica napus HOM05D001074 ORTHO05D001188 3.4e-08 63.2 322 29.5
BraA06t24927Z Brassica rapa HOM05D001074 ORTHO05D001188 3.4e-08 63.2 316 29.7
Thhalv10010561m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 3.4e-08 63.2 313 29.1
Psat6g034880 Pisum sativum HOM05D001074 ORTHO05D001188 3.4e-08 63.2 330 28.2
Thecc.03G302400 Theobroma cacao HOM05D001074 ORTHO05D001188 3.4e-08 63.2 308 28.2
AL6G35760 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 4.4e-08 62.8 311 30.2
Oeu037054.1 Olea europaea HOM05D001074 ORTHO05D001188 4.4e-08 62.8 315 27.3
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 4.4e-08 62.8 260 29.6
Actinidia08659 Actinidia chinensis HOM05D001074 ORTHO05D001188 5.8e-08 62.4 266 30.5
Migut.F00202 Erythranthe guttata HOM05D001074 ORTHO05D001188 5.8e-08 62.4 319 27.0
FAN08G3059 Fragaria x ananassa HOM05D001074 ORTHO05D001188 5.8e-08 62.4 317 25.6
Peaxi162Scf00740g00137 Petunia axillaris HOM05D001074 ORTHO05D001188 5.8e-08 62.4 316 27.8
RcHm_v2.0_Chr7g0186151 Rosa chinensis HOM05D001074 ORTHO05D001188 5.8e-08 62.4 292 27.4
Solyc03g083030.3 Solanum lycopersicum HOM05D001074 ORTHO05D001188 5.8e-08 62.4 316 27.2
Sopen03g022840 Solanum pennellii HOM05D001074 ORTHO05D001188 5.8e-08 62.4 316 27.2
Medtr1g007880 Medicago truncatula HOM05D001074 ORTHO05D001188 7.6e-08 62.0 335 27.8
Nitab4.5_0000548g0090 Nicotiana tabacum HOM05D001074 ORTHO05D001188 7.6e-08 62.0 326 27.6
Os01g0236400 Oryza sativa ssp. japonica HOM05D001074 ORTHO05D001188 7.6e-08 62.0 310 27.1
Thecc.03G200600 Theobroma cacao HOM05D001074 ORTHO05D001188 7.6e-08 62.0 326 29.8
arahy.Tifrunner.gnm1.ann1.MZEW0G Arachis hypogaea HOM05D001074 ORTHO05D001188 9.9e-08 61.6 250 31.2
Thhalv10004602m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 1.3e-07 61.2 329 29.5
Aqoxy7G00062 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 1.7e-07 60.8 307 28.3
TPR.G12056 Trifolium pratense HOM05D001074 ORTHO05D001188 1.7e-07 60.8 331 26.3
TPR.G18774 Trifolium pratense HOM05D001074 ORTHO05D001188 1.7e-07 60.8 341 27.3
Gohir.D03G115500 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.2e-07 60.5 310 28.4
Oeu060993.1 Olea europaea HOM05D001074 ORTHO05D001188 2.2e-07 60.5 352 25.3
BraA06t26431Z Brassica rapa HOM05D001074 ORTHO05D001188 2.9e-07 60.1 309 29.1
Ca_16718_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 2.9e-07 60.1 328 29.3
Rhsim03G0209700 Rhododendron simsii HOM05D001074 ORTHO05D001188 2.9e-07 60.1 271 29.5
TWI14G0212 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 2.9e-07 60.1 270 28.5
Nitab4.5_0005514g0020 Nicotiana tabacum HOM05D001074 ORTHO05D001188 3.8e-07 59.7 322 27.0
Potri.003G142800 Populus trichocarpa HOM05D001074 ORTHO05D001188 6.4e-07 58.9 317 28.1
CiPaw.06G045300 Carya illinoinensis HOM05D001074 ORTHO05D001188 1.1e-06 58.2 333 26.7
FAN01G2022 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.1e-06 58.2 160 36.2
FAN06G1154 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.1e-06 58.2 160 36.2
FAN18G2379 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.1e-06 58.2 267 27.0
FAN18G4084 Fragaria x ananassa HOM05D003558 ORTHO05D004392 1.1e-06 58.2 267 27.0
Nitab4.5_0002793g0020 Nicotiana tabacum HOM05D001074 ORTHO05D001188 1.1e-06 58.2 238 29.0
Potri.001G088100 Populus trichocarpa HOM05D001074 ORTHO05D001188 1.1e-06 58.2 302 26.2
SGA_v2.0_scaffold44G16811 Striga asiatica HOM05D001074 ORTHO05D001188 1.1e-06 58.2 308 26.9
unitig_92.g28250 Utricularia gibba HOM05D001074 ORTHO05D001188 1.1e-06 58.2 313 24.9
Gohir.A12G249100 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.4e-06 57.8 320 28.4
HanXRQChr15g0485711 Helianthus annuus HOM05D001074 ORTHO05D001188 1.4e-06 57.8 333 26.1
COL.COLO4_10744 Corchorus olitorius HOM05D001074 ORTHO05D001188 2.4e-06 57.0 287 28.9
C07p43460 Brassica napus HOM05D001074 ORTHO05D001188 3.2e-06 56.6 311 28.3
BolC7t44872H Brassica oleracea HOM05D001074 ORTHO05D001188 3.2e-06 56.6 311 28.3
Ciclev10021055m.g Citrus clementina HOM05D001074 ORTHO05D001188 3.2e-06 56.6 336 27.1
HanXRQChr07g0205121 Helianthus annuus HOM05D001074 ORTHO05D001188 3.2e-06 56.6 316 28.8
ECA233G1696 Erigeron canadensis HOM05D001074 ORTHO05D001188 4.2e-06 56.2 316 28.5
TAR636G2195 Trochodendron aralioides HOM05D001074 ORTHO05D001188 5.4e-06 55.8 287 28.9
CiPaw.11G117300 Carya illinoinensis HOM05D001074 ORTHO05D001188 7.1e-06 55.5 308 27.9
Gohir.D12G239400 Gossypium hirsutum HOM05D001074 ORTHO05D001188 7.1e-06 55.5 310 28.1
RcHm_v2.0_Chr1g0381461 Rosa chinensis HOM05D001074 ORTHO05D001188 7.1e-06 55.5 141 38.3
BcaNung01222 Brassica carinata HOM05D001074 ORTHO05D001188 9.3e-06 55.1 312 28.2
Cpa.g.sc79.4 Carica papaya HOM05D001074 ORTHO05D001188 9.3e-06 55.1 294 29.3


User provided reference genes

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