Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 4.8e-238 827.4 405 100.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.2e-161 573.5 410 68.3
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 5.8e-159 564.7 376 72.1
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 3.0e-155 552.4 378 70.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 2.5e-154 549.3 378 69.8
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 3.3e-154 548.9 401 69.1
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 7.3e-154 547.7 407 67.3
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 1.1e-152 543.9 386 69.2
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.2e-151 540.4 388 67.8
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 7.5e-151 537.7 396 65.4
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 9.9e-151 537.3 400 64.2
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 9.9e-151 537.3 390 66.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.7e-150 536.6 378 69.0
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.7e-150 536.6 378 69.0
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.2e-150 536.2 367 70.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.9e-150 535.8 367 70.6
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.7e-150 535.4 362 72.1
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 4.9e-150 535.0 369 68.3
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.9e-149 533.1 353 72.2
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.2e-149 532.3 378 68.0
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 5.4e-149 531.6 353 72.2
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 7.1e-149 531.2 366 70.2
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 9.2e-149 530.8 356 71.3
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 1.2e-148 530.4 365 69.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.2e-148 530.4 358 69.0
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 3.5e-148 528.9 368 67.7
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.0e-148 528.1 366 70.8
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.3e-147 526.2 500 56.8
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.3e-147 526.2 356 70.5
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.9e-147 525.4 398 64.1
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 8.6e-147 524.2 359 67.7
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 1.1e-146 523.9 390 63.8
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 1.1e-146 523.9 390 67.2
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 2.5e-146 522.7 356 67.7
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.6e-145 520.0 360 69.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.1e-145 519.6 360 67.8
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 6.2e-145 518.1 356 69.9
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.1e-144 517.3 353 69.1
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.1e-144 517.3 360 68.1
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 3.1e-144 515.8 355 67.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 4.0e-144 515.4 360 66.9
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.2e-143 513.8 356 68.3
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.2e-143 513.8 363 67.5
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.5e-143 513.5 356 67.7
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 3.4e-143 512.3 353 68.8
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 3.4e-143 512.3 359 67.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 4.4e-143 511.9 353 68.8
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 7.6e-143 511.1 360 67.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.7e-142 510.0 369 66.4
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 1.7e-142 510.0 360 66.7
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.8e-142 508.8 361 67.0
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 4.9e-142 508.4 360 66.9
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.4e-141 506.9 366 66.1
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 2.4e-141 506.1 359 67.1
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 4.1e-141 505.4 358 67.6
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.1e-141 505.4 366 65.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.6e-140 503.4 362 66.3
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.3e-139 499.6 375 64.5
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.3e-139 499.6 333 69.7
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 5.1e-139 498.4 361 66.2
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.5e-138 496.9 374 64.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 2.5e-138 496.1 370 63.5
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.1e-137 493.0 362 65.7
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 6.2e-137 491.5 340 70.3
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.0e-136 487.6 364 62.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 7.6e-135 484.6 340 67.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 2.9e-134 482.6 384 62.8
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 6.4e-134 481.5 399 61.4
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.2e-133 478.8 383 63.2
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.4e-133 478.4 425 59.8
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 4.6e-132 475.3 355 63.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.9e-131 472.2 389 60.2
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 8.7e-131 471.1 359 65.2
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 3.3e-130 469.2 372 62.1
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.3e-129 467.2 388 62.4
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.6e-129 465.7 353 64.0
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.4e-128 463.0 338 67.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.9e-128 461.5 373 62.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.9e-126 456.1 388 60.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-125 453.8 353 63.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.5e-119 433.7 357 57.1
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.1e-117 427.6 385 57.7
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 5.5e-117 425.2 325 62.5
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 6.0e-116 421.8 327 63.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.3e-110 404.1 344 56.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.1e-109 401.0 382 51.3
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.9e-109 400.2 425 52.2
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 5.9e-103 378.6 342 52.9
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.4e-101 374.0 357 54.6
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.0e-94 351.3 388 50.8
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 3.8e-94 349.4 234 69.2
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.9e-93 347.1 234 69.2
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.2e-87 327.8 286 57.7
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 1.2e-84 317.8 399 46.9
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.6e-84 316.2 322 51.2
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.8e-67 260.8 372 39.0
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.0e-54 218.4 347 39.8
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 9.5e-45 185.3 120 70.0
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.8e-42 175.3 188 51.1
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 4.9e-41 172.9 118 68.6
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.6e-36 156.8 108 66.7
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.1e-36 155.6 229 42.4
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 2.3e-35 154.1 132 59.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 6.8e-27 125.9 148 50.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.3e-25 121.7 79 65.8
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.6e-23 113.2 168 41.1
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 8.7e-22 109.0 125 48.0
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 1.1e-21 108.6 112 49.1
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-19 101.7 58 77.6
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 2.2e-17 94.4 354 24.9
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 5.1e-14 83.2 72 56.9
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 8.7e-14 82.4 99 41.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.3e-12 78.6 66 60.6
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.1e-11 75.5 68 57.4
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 6.4e-09 66.2 334 23.4
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 7.9e-07 59.3 41 65.9
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 5.1e-06 56.6 72 40.3


User provided reference genes

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