Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 0.0e+00 2031.9 1039 100.0
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 0.0e+00 1417.1 1028 74.8
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 6.6e-58 230.3 1328 26.1
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 2.8e-56 224.9 1295 26.1
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.9e-52 212.2 1334 25.1
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 3.5e-51 208.0 1301 26.0
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 9.0e-47 193.4 1315 25.5
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 3.0e-42 178.3 594 27.8
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 3.2e-36 158.3 1345 25.1
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 1.5e-33 149.4 1275 23.7
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 9.6e-33 146.7 1288 24.5
CDE02G3671 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 1.6e-32 146.0 83 88.0
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 4.0e-31 141.4 1320 24.2
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 7.6e-30 137.1 1246 23.1
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 2.2e-29 135.6 1309 24.0
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 6.4e-29 134.0 1231 24.3
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 7.1e-28 130.6 1202 23.9
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 2.7e-27 128.6 1341 22.9
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 7.9e-27 127.1 563 27.4
MELO3C014460.2 Cucumis melo HOM05D006994 ORTHO05D008229 7.9e-27 127.1 1297 23.7
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 3.0e-26 125.2 1292 23.5
CANSAT64G1952 Cannabis sativa HOM05D006994 ORTHO05D008229 5.1e-26 124.4 1330 23.7
CiPaw.03G188100 Carya illinoinensis HOM05D006994 ORTHO05D008229 5.1e-26 124.4 180 42.8
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 4.3e-25 121.3 579 27.1
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 7.4e-25 120.6 524 30.3
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 1.1e-23 116.7 1289 23.4
Actinidia11193 Actinidia chinensis HOM05D006994 ORTHO05D008229 2.4e-23 115.5 996 25.7
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 3.1e-23 115.2 1290 23.3
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 5.3e-23 114.4 1288 23.0
Gohir.A09G006700 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.2e-22 113.2 480 28.1
ClCG09G022300 Citrullus lanatus HOM05D006994 ORTHO05D008229 1.5e-22 112.8 178 42.1
PGR042G2686 Punica granatum HOM05D006994 ORTHO05D008229 1.5e-22 112.8 1229 24.3
GSVIVG01000809001 Vitis vinifera HOM05D006994 ORTHO05D008229 1.5e-22 112.8 541 24.8
Cfa022556 Carpinus fangiana HOM05D006994 ORTHO05D008229 1.7e-21 109.4 152 41.4
Lj1A585G38 Lonicera japonica HOM05D006994 ORTHO05D008229 8.4e-21 107.1 1141 24.8
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 1.1e-20 106.7 571 27.1
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 1.4e-20 106.3 1188 23.7
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 5.5e-20 104.4 1292 22.6
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 7.1e-20 104.0 154 39.6
Hma1.2p1_0036F.1_g023740 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 1.6e-19 102.8 170 39.4
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 2.1e-19 102.4 594 24.4
Phvul.006G035100 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 6.0e-19 100.9 172 37.8
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.0e-18 100.1 1339 22.6
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 1.8e-18 99.4 200 36.5
MD17G1141700 Malus domestica HOM05D006994 ORTHO05D008229 1.8e-18 99.4 195 39.5
Sed0021960 Sechium edule HOM05D006994 ORTHO05D008229 3.0e-18 98.6 1193 23.3
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 2.5e-17 95.5 168 38.1
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 3.3e-17 95.1 623 24.6
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 4.3e-17 94.7 570 25.6
Sopen07g029270 Solanum pennellii HOM05D006994 ORTHO05D008229 5.7e-17 94.4 1238 21.7
FAN05G1234 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.6e-16 92.8 179 38.0
PSO541G2047 Papaver somniferum HOM05D006994 ORTHO05D008229 1.6e-16 92.8 203 32.5
Glyma.18G104900 Glycine max HOM05D006994 ORTHO05D008229 2.8e-16 92.0 181 35.4
vmacro12443 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 2.8e-16 92.0 160 40.0
Cpa.g.sc50.70 Carica papaya HOM05D006994 ORTHO05D008229 3.7e-16 91.7 157 37.6
VMungo0540G1881 Vigna mungo HOM05D006994 ORTHO05D008229 3.7e-16 91.7 164 35.4
PSO675G3324 Papaver somniferum HOM05D006994 ORTHO05D008229 4.8e-16 91.3 211 31.8
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 2.4e-15 89.0 601 24.8
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 3.1e-15 88.6 168 34.5
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 3.1e-15 88.6 174 32.8
LjContig00310g0024424 Lotus japonicus HOM05D006994 ORTHO05D008229 1.2e-14 86.7 171 33.3
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 3.4e-14 85.1 160 34.4
MSTRG.15058 Avicennia marina HOM05D006994 ORTHO05D008229 4.5e-14 84.7 158 32.9
COL.COLO4_33720 Corchorus olitorius HOM05D006994 ORTHO05D008229 4.5e-14 84.7 146 36.3
Psat0s1339g0080 Pisum sativum HOM05D006994 ORTHO05D008229 4.5e-14 84.7 174 34.5
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 7.6e-14 84.0 1157 23.2
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 1.7e-13 82.8 177 32.8
DCAR_021306 Daucus carota HOM05D006994 ORTHO05D008229 2.9e-13 82.0 519 25.0
ATR0602G060 Amborella trichopoda HOM05D006994 ORTHO05D008229 6.5e-13 80.9 455 24.2
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 8.5e-13 80.5 178 32.0
SalBow7G4498 Salvia bowleyana HOM05D006994 ORTHO05D008229 3.6e-11 75.1 152 34.2
CAN.G585.58 Capsicum annuum HOM05D006994 ORTHO05D008229 1.8e-10 72.8 1176 22.5
PGSC0003DMG400017294 Solanum tuberosum HOM05D006994 ORTHO05D008229 1.8e-10 72.8 1237 21.2
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 2.3e-10 72.4 183 32.2
Nitab4.5_0001121g0180 Nicotiana tabacum HOM05D006994 ORTHO05D008229 2.3e-10 72.4 1125 21.8
Peaxi162Scf00154g00620 Petunia axillaris HOM05D006994 ORTHO05D008229 2.3e-10 72.4 54 57.4
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 3.0e-10 72.0 144 34.7
TWI59G0403 Tripterygium wilfordii HOM05D006994 ORTHO05D008229 3.9e-10 71.6 574 24.2
Manes.02G085800 Manihot esculenta HOM05D006994 ORTHO05D008229 6.7e-10 70.9 756 24.7
CAN.G1332.1 Capsicum annuum HOM05D006994 ORTHO05D008229 8.8e-10 70.5 1154 22.8
Lalb_Chr04g0248671 Lupinus albus HOM05D006994 ORTHO05D008229 8.8e-10 70.5 160 32.5
Sed0007753 Sechium edule HOM05D006994 ORTHO05D008229 8.8e-10 70.5 85 48.2
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 1.5e-09 69.7 546 22.7
Gohir.A09G006800 Gossypium hirsutum HOM05D006994 ORTHO05D008229 1.5e-09 69.7 62 53.2
Sopen06g004440 Solanum pennellii HOM05D006994 ORTHO05D008229 1.5e-09 69.7 471 24.6
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 7.4e-09 67.4 120 36.7
SEGI_04996 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 3.7e-08 65.1 94 41.5
SEGI_14105 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 3.7e-08 65.1 94 41.5
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 6.3e-08 64.3 148 32.4
Atru.chr6.1475 Acer truncatum HOM05D006994 ORTHO05D008229 1.1e-07 63.5 53 56.6
Migut.H02109 Erythranthe guttata HOM05D006994 ORTHO05D008229 1.1e-07 63.5 51 54.9
MSTRG.6762 Avicennia marina HOM05D006994 ORTHO05D008229 1.8e-07 62.8 204 26.5
Glyma.18G105000 Glycine max HOM05D006994 ORTHO05D008229 2.4e-07 62.4 61 50.8
Lalb_Chr17g0348351 Lupinus albus HOM05D006994 ORTHO05D008229 4.1e-07 61.6 63 46.0
HPP92_005185 Vanilla planifolia HOM05D006994 ORTHO05D008229 5.3e-07 61.2 263 25.5
SEGI_32539 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 6.9e-07 60.8 68 51.5
Oeu014262.1 Olea europaea HOM05D006994 ORTHO05D008229 9.1e-07 60.5 185 26.5
SEGI_38675 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 1.2e-06 60.1 69 47.8
SEGI_40378 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 2.6e-06 58.9 64 45.3
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 2.6e-06 58.9 61 49.2
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 4.5e-06 58.2 87 40.2
Oeu041607.1 Olea europaea HOM05D006994 ORTHO05D008229 7.7e-06 57.4 547 20.8


User provided reference genes

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