Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1175 Ceratophyllum demersum HOM05D005367 ORTHO05D006328 2.0e-104 382.5 195 100.0
Nn1g01501 Nelumbo nucifera HOM05D005367 ORTHO05D006328 3.1e-09 66.2 121 37.2
TAR636G2389 Trochodendron aralioides HOM05D003133 ORTHO05D003642 5.3e-09 65.5 130 36.9
Zm00001eb429400 Zea mays HOM05D005367 ORTHO05D006328 1.5e-08 63.9 43 58.1
Sc01g0003360 Simmondsia chinensis HOM05D005367 ORTHO05D006328 2.6e-08 63.2 123 36.6
CiPaw.02G029900 Carya illinoinensis HOM05D005367 ORTHO05D006328 5.8e-08 62.0 130 31.5
Potri.014G082600 Populus trichocarpa HOM05D005367 ORTHO05D006328 5.8e-08 62.0 120 36.7
CSS0033809 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 7.6e-08 61.6 115 37.4
QL08p049031 Quercus lobata HOM05D005367 ORTHO05D006328 7.6e-08 61.6 120 34.2
MBI17_g24635_MAGBIO Magnolia biondii HOM05D005367 ORTHO05D006328 1.0e-07 61.2 44 56.8
MD07G1139200 Malus domestica HOM05D005367 ORTHO05D006328 1.0e-07 61.2 113 35.4
Nn6g33454 Nelumbo nucifera HOM05D005367 ORTHO05D006328 1.3e-07 60.8 40 60.0
GSVIVG01026893001 Vitis vinifera HOM05D005367 ORTHO05D006328 1.3e-07 60.8 114 34.2
Glyma.18G231900 Glycine max HOM05D005367 ORTHO05D006328 2.9e-07 59.7 90 35.6
Lj1g0004821 Lotus japonicus HOM05D005367 ORTHO05D006328 2.9e-07 59.7 53 47.2
Potri.002G158500 Populus trichocarpa HOM05D005367 ORTHO05D006328 2.9e-07 59.7 120 35.8
PGR042G0868 Punica granatum HOM05D005367 ORTHO05D006328 2.9e-07 59.7 84 42.9
Aqoxy7G00339 Aquilegia oxysepala HOM05D005367 ORTHO05D006328 3.8e-07 59.3 95 40.0
Cfa003939 Carpinus fangiana HOM05D005367 ORTHO05D006328 3.8e-07 59.3 133 35.3
Duzib133G0249 Durio zibethinus HOM05D005367 ORTHO05D006328 3.8e-07 59.3 72 41.7
Duzib205G1257 Durio zibethinus HOM05D005367 ORTHO05D006328 3.8e-07 59.3 116 37.1
ClCG06G003800 Citrullus lanatus HOM05D005367 ORTHO05D006328 4.9e-07 58.9 103 34.0
Sabra14G0059900 Salix brachista HOM05D005367 ORTHO05D006328 4.9e-07 58.9 120 35.8
Thecc.01G360700 Theobroma cacao HOM05D005367 ORTHO05D006328 4.9e-07 58.9 118 33.9
EL10Ac1g00429 Beta vulgaris HOM05D005367 ORTHO05D006328 8.4e-07 58.2 47 53.2
COL.COLO4_12698 Corchorus olitorius HOM05D005367 ORTHO05D006328 8.4e-07 58.2 124 33.9
Haze_15487 Corylus avellana HOM05D005367 ORTHO05D006328 8.4e-07 58.2 129 34.9
CsaV3_6G000470 Cucumis sativus L. HOM05D005367 ORTHO05D006328 8.4e-07 58.2 85 35.3
Prupe.2G295600 Prunus persica HOM05D005367 ORTHO05D006328 1.1e-06 57.8 91 35.2
Sed0017642 Sechium edule HOM05D005367 ORTHO05D006328 1.1e-06 57.8 53 47.2
TWI14G0016 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 1.1e-06 57.8 120 33.3
TAR375G0799 Trochodendron aralioides HOM05D005367 ORTHO05D006328 1.1e-06 57.8 122 34.4
HPP92_027620 Vanilla planifolia HOM05D005367 ORTHO05D006328 1.1e-06 57.8 114 31.6
Ah.05g180710 Amaranthus hybridus HOM05D005367 ORTHO05D006328 1.4e-06 57.4 47 51.1
Ca_07909_v3 Cicer arietinum L. HOM05D005367 ORTHO05D006328 1.9e-06 57.0 45 46.7
Cc02_g37850 Coffea canephora HOM05D005367 ORTHO05D006328 1.9e-06 57.0 41 56.1
Gohir.A11G088100 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.9e-06 57.0 99 34.3
Gohir.D11G092400 Gossypium hirsutum HOM05D005367 ORTHO05D006328 1.9e-06 57.0 99 37.4
CSS0040093 Camellia sinensis var. sinensis HOM05D005367 ORTHO05D006328 2.5e-06 56.6 30 76.7
Dinv43805 Davidia involucrata HOM05D005367 ORTHO05D006328 2.5e-06 56.6 79 36.7
Lalb_Chr01g0011531 Lupinus albus HOM05D005367 ORTHO05D006328 2.5e-06 56.6 100 35.0
PSO478G0766 Papaver somniferum HOM05D005367 ORTHO05D006328 2.5e-06 56.6 117 35.0
AUR62004342 Chenopodium quinoa HOM05D005367 ORTHO05D006328 3.2e-06 56.2 47 48.9
MELO3C021217.2 Cucumis melo HOM05D005367 ORTHO05D006328 3.2e-06 56.2 85 35.3
Lalb_Chr24g0401631 Lupinus albus HOM05D005367 ORTHO05D006328 3.2e-06 56.2 100 35.0
RcHm_v2.0_Chr1g0377581 Rosa chinensis HOM05D005367 ORTHO05D006328 3.2e-06 56.2 116 31.9
Actinidia20916 Actinidia chinensis HOM05D005367 ORTHO05D006328 4.2e-06 55.8 39 59.0
Ciclev10021865m.g Citrus clementina HOM05D005367 ORTHO05D006328 4.2e-06 55.8 117 31.6
Nitab4.5_0008050g0010 Nicotiana tabacum HOM05D005367 ORTHO05D006328 4.2e-06 55.8 114 36.0
Os04g0556900 Oryza sativa ssp. japonica HOM05D005367 ORTHO05D006328 4.2e-06 55.8 134 32.8
HPP92_022052 Vanilla planifolia HOM05D005367 ORTHO05D006328 4.2e-06 55.8 114 30.7
AUR62022549 Chenopodium quinoa HOM05D005367 ORTHO05D006328 5.5e-06 55.5 37 59.5
COL.COLO4_14330 Corchorus olitorius HOM05D005367 ORTHO05D006328 5.5e-06 55.5 45 46.7
Gorai.007G098700 Gossypium raimondii HOM05D005367 ORTHO05D006328 5.5e-06 55.5 99 36.4
RcHm_v2.0_Chr1g0355051 Rosa chinensis HOM05D005367 ORTHO05D006328 5.5e-06 55.5 56 44.6
MD01G1057500 Malus domestica HOM05D005367 ORTHO05D006328 7.1e-06 55.1 113 33.6
PSO782G1827 Papaver somniferum HOM05D005367 ORTHO05D006328 7.1e-06 55.1 110 31.8
Hund16930 Selenicereus undatus HOM05D005367 ORTHO05D006328 7.1e-06 55.1 115 32.2
TWI59G0064 Tripterygium wilfordii HOM05D005367 ORTHO05D006328 7.1e-06 55.1 151 28.5
Eucgr.E00158 Eucalyptus grandis HOM05D005367 ORTHO05D006328 9.3e-06 54.7 67 44.8
MD01G1056800 Malus domestica HOM05D005367 ORTHO05D006328 9.3e-06 54.7 43 53.5


User provided reference genes

Program Settings