Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.1e-133 479.9 246 100.0
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 4.6e-103 378.3 203 94.1
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.8e-83 313.2 256 67.2
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 5.0e-81 305.1 215 71.2
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.1e-80 303.9 216 70.8
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 5.5e-80 301.6 235 66.8
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 8.0e-79 297.7 223 67.7
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.0e-78 297.4 216 71.3
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 2.3e-78 296.2 231 65.8
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 3.0e-78 295.8 218 67.9
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 4.0e-78 295.4 218 67.9
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 8.8e-78 294.3 222 68.0
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 2.0e-77 293.1 254 62.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 2.6e-77 292.7 251 65.7
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 3.4e-77 292.4 221 68.3
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 4.4e-77 292.0 217 68.2
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 5.7e-77 291.6 251 63.3
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 5.7e-77 291.6 256 63.3
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.3e-76 290.4 218 67.4
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.7e-76 290.0 215 67.9
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 2.2e-76 289.7 215 66.5
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.2e-76 289.7 215 67.9
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.8e-76 289.3 248 62.1
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.7e-76 288.9 215 67.9
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 4.8e-76 288.5 216 70.4
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 4.8e-76 288.5 254 61.4
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 4.8e-76 288.5 241 65.6
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.3e-76 288.1 249 61.8
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 6.3e-76 288.1 216 68.1
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 8.3e-76 287.7 251 61.8
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 8.3e-76 287.7 246 64.6
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.1e-75 287.3 217 66.8
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-75 287.3 250 62.8
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.4e-75 287.0 237 64.6
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.4e-75 287.0 195 73.3
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.8e-75 286.6 218 66.5
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 2.4e-75 286.2 217 66.4
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 2.4e-75 286.2 218 65.1
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 3.1e-75 285.8 256 57.4
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 5.4e-75 285.0 225 64.0
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 7.0e-75 284.6 249 61.8
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 7.0e-75 284.6 222 65.3
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.0e-75 284.6 248 60.9
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 7.0e-75 284.6 224 67.4
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 9.1e-75 284.3 257 60.3
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 9.1e-75 284.3 216 68.5
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 9.1e-75 284.3 246 62.2
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.2e-74 283.9 182 75.3
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.0e-74 283.1 216 66.2
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 2.0e-74 283.1 218 68.3
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.0e-74 283.1 216 67.1
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 2.7e-74 282.7 248 64.1
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.7e-74 282.7 216 66.7
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 4.5e-74 282.0 215 67.9
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 5.9e-74 281.6 248 61.3
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 5.9e-74 281.6 233 61.8
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.7e-73 280.0 246 62.2
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.7e-73 280.0 218 65.1
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 8.5e-73 277.7 270 59.3
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.1e-72 277.3 226 61.9
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 1.5e-72 276.9 226 61.9
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.9e-72 276.6 176 76.7
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 3.2e-72 275.8 257 59.5
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 4.2e-72 275.4 244 60.7
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 4.2e-72 275.4 244 60.7
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 5.5e-72 275.0 255 59.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 9.4e-72 274.2 215 66.5
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 9.4e-72 274.2 178 74.7
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 2.7e-71 272.7 256 57.8
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 2.7e-71 272.7 250 58.4
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 4.7e-71 271.9 215 64.2
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 4.0e-70 268.9 217 62.7
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 4.0e-70 268.9 246 57.7
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 6.8e-70 268.1 262 60.3
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 2.0e-69 266.5 248 56.9
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.7e-69 265.0 295 54.2
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 5.7e-69 265.0 218 61.9
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 9.8e-69 264.2 232 58.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 2.2e-68 263.1 267 57.7
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.2e-68 263.1 215 63.7
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 2.2e-68 263.1 246 58.5
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.7e-68 262.3 221 57.0
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 6.3e-68 261.5 269 56.9
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 6.3e-68 261.5 269 56.9
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 6.3e-68 261.5 160 76.9
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 8.3e-68 261.2 181 68.5
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 8.3e-68 261.2 247 58.3
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.4e-67 260.4 218 60.1
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 5.4e-67 258.5 225 60.4
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.0e-66 256.5 263 58.2
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 3.5e-66 255.8 181 65.2
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 3.8e-65 252.3 255 53.3
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 3.8e-65 252.3 256 57.4
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 7.3e-64 248.1 251 56.2
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 1.6e-63 246.9 220 57.3
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 8.0e-63 244.6 226 54.4
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 3.0e-62 242.7 193 64.2
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 2.0e-61 240.0 183 60.7
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 7.5e-61 238.0 241 58.1
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.2e-60 236.5 218 58.7
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 2.2e-60 236.5 143 81.8
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 9.2e-59 231.1 143 79.7
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 2.8e-55 219.5 244 53.7
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 4.0e-46 189.1 172 55.8
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 3.7e-44 182.6 199 46.2
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 3.7e-44 182.6 133 66.2
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 7.1e-43 178.3 143 65.0
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.7e-42 176.4 241 49.0
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 7.3e-40 168.3 222 40.5
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.8e-38 163.7 230 39.6
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.7e-36 157.1 169 56.2
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 6.4e-36 155.2 162 46.3
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 2.1e-34 150.2 93 75.3
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 1.7e-33 147.1 125 62.4
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 3.9e-33 146.0 126 58.7
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-27 127.5 142 55.6
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 2.5e-24 116.7 94 59.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 1.8e-22 110.5 68 75.0
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 9.6e-16 88.2 222 28.4
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 4.0e-14 82.8 132 34.1
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 9.3e-11 71.6 143 30.1
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 1.6e-07 60.8 127 30.7


User provided reference genes

Program Settings