Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.2e-272 942.6 473 100.0
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 4.7e-128 462.2 603 45.6
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 6.1e-128 461.8 592 45.8
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 2.0e-126 456.8 590 45.6
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 6.4e-125 451.8 599 44.6
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.4e-124 449.9 600 45.0
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 5.4e-124 448.7 589 44.7
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.6e-123 447.2 600 44.2
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 2.7e-123 446.4 603 44.4
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 3.5e-123 446.0 600 44.7
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 7.8e-123 444.9 600 44.5
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 3.9e-122 442.6 594 44.4
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 2.5e-121 439.9 583 45.3
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 7.3e-121 438.3 590 44.1
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 9.5e-121 438.0 598 44.0
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 6.2e-120 435.3 589 43.8
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 2.0e-118 430.3 599 42.6
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.9e-116 423.7 600 42.7
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.1e-116 422.5 596 43.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 5.4e-116 422.2 613 41.3
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 5.4e-116 422.2 592 42.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.2e-115 421.0 596 42.4
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 3.5e-115 419.5 592 42.4
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 6.0e-115 418.7 596 42.3
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.3e-114 417.5 592 42.2
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 3.9e-114 416.0 590 41.7
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 1.5e-113 414.1 590 41.4
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 1.9e-113 413.7 596 40.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 3.3e-113 412.9 596 41.6
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 5.6e-113 412.1 596 42.3
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 9.5e-113 411.4 590 41.2
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 1.2e-112 411.0 591 41.5
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 2.1e-112 410.2 590 42.4
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 8.1e-112 408.3 596 41.6
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.1e-111 407.9 600 40.2
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.8e-111 407.1 581 41.8
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.3e-111 406.8 596 41.6
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 3.1e-111 406.4 596 40.9
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 3.1e-111 406.4 577 41.6
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 4.0e-111 406.0 596 41.1
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 5.2e-111 405.6 589 41.4
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.5e-110 404.1 593 41.3
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.0e-110 403.7 593 41.0
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 2.6e-110 403.3 593 40.8
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.4e-110 402.9 593 40.8
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 3.4e-110 402.9 596 41.1
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.3e-109 401.0 589 41.9
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.2e-109 400.2 592 40.4
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 3.7e-109 399.4 593 40.6
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 3.7e-109 399.4 597 40.7
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 6.4e-109 398.7 597 39.9
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.1e-108 397.9 621 39.3
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.1e-108 397.9 621 39.3
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.1e-108 397.9 642 39.7
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.4e-108 397.5 609 40.2
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.4e-108 397.5 621 39.3
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.9e-108 397.1 580 41.6
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 4.1e-108 396.0 592 40.5
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 5.4e-108 395.6 595 41.0
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 7.1e-108 395.2 588 41.5
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 9.2e-108 394.8 582 41.4
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.2e-107 394.4 606 39.8
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 4.6e-107 392.5 596 39.6
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 7.8e-107 391.7 591 40.6
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.3e-106 391.0 591 40.1
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 6.6e-106 388.7 589 40.4
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 8.6e-106 388.3 585 40.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.6e-104 384.0 591 40.1
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 8.1e-104 381.7 591 38.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 8.1e-104 381.7 601 39.3
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.2e-102 377.9 591 38.7
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 4.4e-102 375.9 592 40.4
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.4e-102 375.9 591 39.1
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 4.1e-100 369.4 540 41.7
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.5e-99 366.3 589 39.2
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 3.5e-99 366.3 569 39.7
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 3.5e-99 366.3 592 37.7
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 5.1e-98 362.5 599 38.6
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 1.5e-97 360.9 647 36.9
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 3.3e-97 359.8 592 36.3
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.6e-94 350.1 590 38.3
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 5.8e-94 349.0 603 37.6
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.7e-93 347.4 644 36.0
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 6.4e-93 345.5 591 38.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 8.7e-90 335.1 593 36.8
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 4.9e-85 319.3 502 37.6
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.5e-81 307.8 585 36.4
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 2.8e-80 303.5 499 38.5
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 2.9e-77 293.5 536 37.5
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 3.2e-76 290.0 524 37.6
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 9.0e-71 271.9 520 35.4
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 5.8e-70 269.2 577 33.3
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.5e-65 254.6 260 51.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 2.5e-60 237.3 285 46.7
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.5e-60 237.3 285 46.7
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 3.1e-55 220.3 256 47.3
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 6.9e-55 219.2 574 28.6
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.9e-53 213.8 261 43.3
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.4e-50 204.9 233 50.6
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 2.3e-50 204.1 222 50.9
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 5.1e-50 203.0 212 49.5
Haze_04431 Corylus avellana HOM05D000329 ORTHO05D005330 1.9e-44 184.5 196 51.5
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.8e-42 177.9 202 46.5
Hma1.2p1_3491F.1_g336380 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.7e-40 171.4 227 45.4
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 3.5e-38 163.7 275 38.2
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 5.9e-38 162.9 137 60.6
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 6.5e-37 159.5 148 50.0
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 8.5e-37 159.1 322 33.5
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.2e-33 148.7 203 42.9
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.2e-33 148.7 203 42.9
Sed0005472 Sechium edule HOM05D000329 ORTHO05D005330 8.8e-26 122.5 118 52.5
ClCG06G009450 Citrullus lanatus HOM05D000329 ORTHO05D005330 5.9e-22 109.8 96 60.4
Cpa.g.sc162.42 Carica papaya HOM05D000329 ORTHO05D028196 3.3e-20 104.0 88 60.2
AT4G38092 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 6.1e-19 99.8 96 51.0
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 2.0e-17 94.7 226 32.7
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 5.7e-17 93.2 73 60.3
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 7.0e-15 86.3 120 44.2
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 8.6e-13 79.3 71 52.1
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 5.6e-12 76.6 150 37.3
Sed0009230 Sechium edule HOM05D000329 ORTHO05D028196 1.2e-11 75.5 70 60.0
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 4.7e-11 73.6 69 50.7
SEGI_11781 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 8.9e-10 69.3 69 49.3
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 1.2e-09 68.9 56 53.6
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 4.4e-09 67.0 69 49.3
SHI23197 Sapria himalayana HOM05D000329 ORTHO05D005330 1.3e-08 65.5 59 49.2
Lsat_1_v5_gn_7_52080 Lactuca sativa HOM05D001785 ORTHO05D001150 3.7e-08 63.9 46 65.2
Lsat_1_v5_gn_8_51680 Lactuca sativa HOM05D000144 ORTHO05D005330 1.1e-07 62.4 42 61.9
Lsat_1_v5_gn_7_55340 Lactuca sativa HOM05D000144 ORTHO05D005330 2.4e-07 61.2 42 61.9
SHI23201 Sapria himalayana HOM05D000329 ORTHO05D005330 2.7e-06 57.8 74 39.2


User provided reference genes

Program Settings