Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1094 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 6.9e-66 253.8 129 100.0
CDE02G1429 Ceratophyllum demersum HOM05D004677 ORTHO05D005746 2.7e-62 241.9 129 95.3
MBI10_g43118_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 4.8e-51 204.5 128 76.6
Zm00001eb162930 Zea mays HOM05D004677 ORTHO05D005746 3.1e-50 201.8 127 77.2
PGR142G1137 Punica granatum HOM05D004677 ORTHO05D005746 1.6e-49 199.5 125 79.2
Dinv08753 Davidia involucrata HOM05D004677 ORTHO05D005746 7.7e-49 197.2 126 76.2
CSS0008737 Camellia sinensis var. sinensis HOM05D004677 ORTHO05D005746 1.3e-48 196.4 125 76.8
Atru.chr6.3221 Acer truncatum HOM05D004677 ORTHO05D005746 2.2e-48 195.7 126 76.2
Os01g0531500 Oryza sativa ssp. japonica HOM05D004677 ORTHO05D005746 2.2e-48 195.7 127 75.6
Thecc.01G176700 Theobroma cacao HOM05D004677 ORTHO05D005746 2.2e-48 195.7 126 77.0
Sed0004392 Sechium edule HOM05D004677 ORTHO05D005746 2.9e-48 195.3 125 76.8
CANSAT64G2258 Cannabis sativa HOM05D004677 ORTHO05D005746 3.8e-48 194.9 126 77.8
MELO3C018827.2 Cucumis melo HOM05D004677 ORTHO05D005746 3.8e-48 194.9 126 75.4
CsaV3_7G003450 Cucumis sativus L. HOM05D004677 ORTHO05D005746 3.8e-48 194.9 126 75.4
Rhsim06G0164500 Rhododendron simsii HOM05D004677 ORTHO05D005746 3.8e-48 194.9 125 77.6
Glyma.06G307800 Glycine max HOM05D004677 ORTHO05D005746 5.0e-48 194.5 126 77.0
Aqoxy1G03069 Aquilegia oxysepala HOM05D004677 ORTHO05D005746 6.5e-48 194.1 124 75.8
COL.COLO4_20015 Corchorus olitorius HOM05D004677 ORTHO05D005746 6.5e-48 194.1 126 78.6
Lalb_Chr01g0023241 Lupinus albus HOM05D004677 ORTHO05D005746 1.1e-47 193.4 126 75.4
Thhalv10017055m.g Eutrema salsugineum HOM05D004677 ORTHO05D005746 1.5e-47 193.0 124 75.8
Lalb_Chr01g0005771 Lupinus albus HOM05D004677 ORTHO05D005746 1.5e-47 193.0 126 76.2
Actinidia09726 Actinidia chinensis HOM05D004677 ORTHO05D005746 1.9e-47 192.6 125 76.8
FvH4_6g42850 Fragaria vesca HOM05D004677 ORTHO05D005746 1.9e-47 192.6 126 76.2
FAN14G2731 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.9e-47 192.6 126 76.2
Duzib133G0523 Durio zibethinus HOM05D004677 ORTHO05D005746 2.5e-47 192.2 126 76.2
QL08p032142 Quercus lobata HOM05D004677 ORTHO05D005746 2.5e-47 192.2 126 77.0
SEGI_04984 Sequoiadendron giganteum HOM05D004677 ORTHO05D005746 2.5e-47 192.2 126 75.4
FAN02G0422 Fragaria x ananassa HOM05D004677 ORTHO05D005746 3.2e-47 191.8 126 76.2
FAN05G4912 Fragaria x ananassa HOM05D004677 ORTHO05D005746 3.2e-47 191.8 126 76.2
Cfa014357 Carpinus fangiana HOM05D004677 ORTHO05D005746 4.2e-47 191.4 126 74.6
Haze_12810 Corylus avellana HOM05D004677 ORTHO05D005746 4.2e-47 191.4 126 74.6
MD17G1099100 Malus domestica HOM05D004677 ORTHO05D005746 4.2e-47 191.4 124 77.4
Prupe.3G214600 Prunus persica HOM05D004677 ORTHO05D005746 4.2e-47 191.4 126 75.4
arahy.Tifrunner.gnm1.ann1.5LK61T Arachis hypogaea HOM05D004677 ORTHO05D005746 5.5e-47 191.0 126 75.4
BolC4t27678H Brassica oleracea HOM05D004677 ORTHO05D005746 5.5e-47 191.0 125 75.2
BraA04t18010Z Brassica rapa HOM05D004677 ORTHO05D005746 5.5e-47 191.0 125 75.2
PSO675G6993 Papaver somniferum HOM05D004677 ORTHO05D005746 5.5e-47 191.0 125 74.4
TPR.G4610 Trifolium pratense HOM05D004677 ORTHO05D005746 5.5e-47 191.0 126 75.4
ClCG02G002040 Citrullus lanatus HOM05D004677 ORTHO05D005746 7.2e-47 190.7 126 74.6
Psat7g201040 Pisum sativum HOM05D004677 ORTHO05D005746 7.2e-47 190.7 126 75.4
TAR629G2143 Trochodendron aralioides HOM05D004677 ORTHO05D005746 7.2e-47 190.7 125 74.4
ATR0585G016 Amborella trichopoda HOM05D004677 ORTHO05D005746 1.2e-46 189.9 125 73.6
AT2G32520 Arabidopsis thaliana HOM05D004677 ORTHO05D005746 1.2e-46 189.9 125 74.4
arahy.Tifrunner.gnm1.ann1.34K6GT Arachis hypogaea HOM05D004677 ORTHO05D005746 1.2e-46 189.9 126 74.6
BcaC02g07915 Brassica carinata HOM05D004677 ORTHO05D005746 1.2e-46 189.9 124 75.0
C04p62010 Brassica napus HOM05D004677 ORTHO05D005746 1.2e-46 189.9 124 75.0
Hma1.2p1_0895F.1_g233790 Hydrangea macrophylla HOM05D004677 ORTHO05D005746 1.2e-46 189.9 126 74.6
A04p24990 Brassica napus HOM05D004677 ORTHO05D005746 1.6e-46 189.5 125 74.4
Eucgr.K00785 Eucalyptus grandis HOM05D004677 ORTHO05D005746 2.1e-46 189.1 124 73.4
Gohir.D07G176800 Gossypium hirsutum HOM05D004677 ORTHO05D005746 2.1e-46 189.1 125 74.4
Gorai.001G197600 Gossypium raimondii HOM05D004677 ORTHO05D005746 2.1e-46 189.1 125 74.4
TWI36G1343 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 2.1e-46 189.1 126 73.8
Manes.13G068200 Manihot esculenta HOM05D004677 ORTHO05D005746 2.7e-46 188.7 126 73.8
Potri.014G155200 Populus trichocarpa HOM05D004677 ORTHO05D005746 2.7e-46 188.7 126 73.8
Sabra14G0117500 Salix brachista HOM05D004677 ORTHO05D005746 2.7e-46 188.7 126 73.8
Sed0023389 Sechium edule HOM05D004677 ORTHO05D005746 2.7e-46 188.7 124 76.6
AL4G27910 Arabidopsis lyrata HOM05D004677 ORTHO05D005746 3.6e-46 188.3 125 73.6
Migut.M00416 Erythranthe guttata HOM05D004677 ORTHO05D005746 3.6e-46 188.3 125 72.0
Lj3g0025926 Lotus japonicus HOM05D004677 ORTHO05D005746 3.6e-46 188.3 126 74.6
Sc12g0002230 Simmondsia chinensis HOM05D004677 ORTHO05D005746 3.6e-46 188.3 125 73.6
vmacro12188 Vaccinium macrocarpon HOM05D004677 ORTHO05D005746 3.6e-46 188.3 125 76.0
Ca_19496_v3 Cicer arietinum L. HOM05D004677 ORTHO05D005746 4.7e-46 188.0 126 73.8
TAR627G1178 Trochodendron aralioides HOM05D004677 ORTHO05D005746 4.7e-46 188.0 125 73.6
CiPaw.03G158200 Carya illinoinensis HOM05D004677 ORTHO05D005746 6.1e-46 187.6 124 75.0
Medtr4g049830 Medicago truncatula HOM05D004677 ORTHO05D005746 6.1e-46 187.6 126 73.8
RcHm_v2.0_Chr2g0158791 Rosa chinensis HOM05D004677 ORTHO05D005746 6.1e-46 187.6 126 74.6
CARHR126350 Cardamine hirsuta HOM05D004677 ORTHO05D005746 8.0e-46 187.2 125 72.0
Sp4g14870 Schrenkiella parvula HOM05D004677 ORTHO05D005746 8.0e-46 187.2 124 75.0
Hund06461 Selenicereus undatus HOM05D004677 ORTHO05D005746 8.0e-46 187.2 124 74.2
BcaB06g28600 Brassica carinata HOM05D004677 ORTHO05D005746 1.0e-45 186.8 124 74.2
Phvul.005G116100 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.0e-45 186.8 126 73.0
THA.LOC104800998 Tarenaya hassleriana HOM05D004677 ORTHO05D005746 1.0e-45 186.8 125 73.6
Lj3g0003247 Lotus japonicus HOM05D004677 ORTHO05D005746 1.4e-45 186.4 126 72.2
Ciclev10016206m.g Citrus clementina HOM05D004677 ORTHO05D005746 1.8e-45 186.0 126 72.2
Phvul.011G101800 Phaseolus vulgaris HOM05D004677 ORTHO05D005746 1.8e-45 186.0 125 73.6
VMungo1127G1216 Vigna mungo HOM05D004677 ORTHO05D005746 1.8e-45 186.0 125 74.4
Hund00385 Selenicereus undatus HOM05D004677 ORTHO05D005746 3.0e-45 185.3 125 72.0
VMungo1080G1602 Vigna mungo HOM05D004677 ORTHO05D005746 5.2e-45 184.5 126 71.4
Glyma.12G192200 Glycine max HOM05D004677 ORTHO05D005746 6.7e-45 184.1 126 72.2
TWI18G0105 Tripterygium wilfordii HOM05D004677 ORTHO05D005746 6.7e-45 184.1 126 72.2
HPP92_020158 Vanilla planifolia HOM05D004677 ORTHO05D005746 1.2e-44 183.3 125 72.0
Aa31LG5G4780 Aethionema arabicum HOM05D004677 ORTHO05D005746 1.5e-44 183.0 125 71.2
BcaC02g11313 Brassica carinata HOM05D004677 ORTHO05D005746 1.5e-44 183.0 125 72.0
A05p13260 Brassica napus HOM05D004677 ORTHO05D005746 1.5e-44 183.0 124 71.8
C04p17150 Brassica napus HOM05D004677 ORTHO05D005746 1.5e-44 183.0 125 72.0
BolC4t23265H Brassica oleracea HOM05D004677 ORTHO05D005746 1.5e-44 183.0 125 72.0
BraA05t20266Z Brassica rapa HOM05D004677 ORTHO05D005746 1.5e-44 183.0 124 71.8
DCAR_019755 Daucus carota HOM05D004677 ORTHO05D005746 2.0e-44 182.6 126 69.0
MBI10_g41369_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 2.0e-44 182.6 128 70.3
MD09G1072400 Malus domestica HOM05D004677 ORTHO05D005746 7.5e-44 180.6 126 71.4
Carub.0004s1386 Capsella rubella HOM05D004677 ORTHO05D005746 9.7e-44 180.3 125 71.2
MSTRG.14847 Avicennia marina HOM05D004677 ORTHO05D005746 1.7e-43 179.5 126 69.0
Cc05_g03990 Coffea canephora HOM05D004677 ORTHO05D005746 1.7e-43 179.5 126 69.0
HanXRQChr03g0073261 Helianthus annuus HOM05D004677 ORTHO05D005746 4.8e-43 177.9 126 67.5
Oeu027244.1 Olea europaea HOM05D004677 ORTHO05D005746 4.8e-43 177.9 125 70.4
BcaB02g10464 Brassica carinata HOM05D004677 ORTHO05D005746 6.3e-43 177.6 125 70.4
Sopen05g026690 Solanum pennellii HOM05D004677 ORTHO05D005746 6.3e-43 177.6 126 70.6
Nitab4.5_0000006g0310 Nicotiana tabacum HOM05D004677 ORTHO05D005746 3.1e-42 175.3 126 69.0
EL10Ac9g22065 Beta vulgaris HOM05D004677 ORTHO05D005746 4.1e-42 174.9 125 68.8
Nitab4.5_0004702g0010 Nicotiana tabacum HOM05D004677 ORTHO05D005746 5.3e-42 174.5 126 69.0
Peaxi162Scf00462g00089 Petunia axillaris HOM05D004677 ORTHO05D005746 9.1e-42 173.7 126 68.3
Lj3g0012150 Lotus japonicus HOM05D004677 ORTHO05D005746 1.2e-41 173.3 126 65.9
FAN09G3259 Fragaria x ananassa HOM05D004677 ORTHO05D005746 1.6e-41 172.9 126 70.6
AUR62012879 Chenopodium quinoa HOM05D004677 ORTHO05D005746 2.0e-41 172.6 125 66.4
AUR62027103 Chenopodium quinoa HOM05D004677 ORTHO05D005746 2.7e-41 172.2 125 66.4
MBI10_g41368_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 2.7e-41 172.2 108 77.8
Lsat_1_v5_gn_9_106900 Lactuca sativa HOM05D004677 ORTHO05D005746 4.5e-41 171.4 127 66.1
Lj1A770G43 Lonicera japonica HOM05D004677 ORTHO05D005746 7.7e-41 170.6 126 65.9
Cpa.g.sc572.2 Carica papaya HOM05D004677 ORTHO05D005746 2.2e-40 169.1 111 74.8
HanXRQChr15g0490311 Helianthus annuus HOM05D004677 ORTHO05D005746 5.0e-40 167.9 126 65.9
Mapoly0043s0053 Marchantia polymorpha HOM05D004677 ORTHO05D005746 5.0e-40 167.9 126 63.5
Gohir.A07G174750 Gossypium hirsutum HOM05D004677 ORTHO05D005746 1.1e-39 166.8 124 66.1
Pp3c16_5740 Physcomitrium patens HOM05D004677 ORTHO05D005746 2.7e-38 162.2 126 58.7
SGA_v2.0_scaffold34G13862 Striga asiatica HOM05D004677 ORTHO05D005746 8.0e-38 160.6 125 64.0
SMO351G0384 Selaginella moellendorffii HOM05D004677 ORTHO05D005746 1.2e-36 156.8 124 60.5
SGA_v2.0_scaffold186G40184 Striga asiatica HOM05D004677 ORTHO05D005746 4.4e-36 154.8 126 62.7
CBR_g23740 Chara braunii HOM05D004677 ORTHO05D005746 2.4e-34 149.1 124 58.1
Lj5g0020236 Lotus japonicus HOM05D004677 ORTHO05D005746 4.1e-34 148.3 132 58.3
SGA_v2.0_scaffold445G51724 Striga asiatica HOM05D004677 ORTHO05D005746 4.1e-34 148.3 126 59.5
Lsat_1_v5_gn_9_106880 Lactuca sativa HOM05D004677 ORTHO05D005746 1.6e-33 146.4 125 58.4
ECA240G0706 Erigeron canadensis HOM05D004677 ORTHO05D005746 2.7e-33 145.6 113 61.9
MBI10_g35587_MAGBIO Magnolia biondii HOM05D004677 ORTHO05D005746 1.3e-32 143.3 127 59.8
unitig_0.g733 Utricularia gibba HOM05D004677 ORTHO05D005746 6.1e-30 134.4 98 67.3
Lj2g0026590 Lotus japonicus HOM05D004677 ORTHO05D005746 1.3e-27 126.7 139 52.5
Lj2g0012873 Lotus japonicus HOM05D004677 ORTHO05D005746 9.2e-26 120.6 127 52.8
Lj3g0001260 Lotus japonicus HOM05D004677 ORTHO05D005746 2.0e-25 119.4 127 52.8
HPP92_020157 Vanilla planifolia HOM05D004677 ORTHO05D005746 6.1e-22 107.8 99 52.5
SHI10364 Sapria himalayana HOM05D004677 ORTHO05D005746 1.8e-18 96.3 57 84.2
Solyc05g043430.4 Solanum lycopersicum HOM05D004677 ORTHO05D005746 7.0e-18 94.4 56 85.7
Oeu036746.3 Olea europaea HOM05D004677 ORTHO05D005746 1.6e-17 93.2 70 60.0
PRCOL_00005478 Prasinoderma coloniale HOM05D004677 ORTHO05D005746 7.8e-17 90.9 128 40.6
MCO13G274 Micromonas commoda HOM05D004677 ORTHO05D005746 9.5e-15 84.0 129 36.4
Cre06.g294000 Chlamydomonas reinhardtii HOM05D004677 ORTHO05D005746 2.8e-14 82.4 126 38.9
AagrBONN_evm.TU.Sc2ySwM_117.68 Anthoceros agrestis HOM05D004677 ORTHO05D005746 8.3e-11 70.9 60 53.3


User provided reference genes

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