Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1083 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 2.3e-47 191.8 93 100.0
CDE02G4445 Ceratophyllum demersum HOM05D004101 ORTHO05D005221 9.2e-28 126.7 69 85.5
Aqoxy2G00645 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.7e-13 79.3 69 52.2
Aqoxy2G02197 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.7e-13 79.3 69 52.2
Aqoxy6G00101 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 1.7e-13 79.3 69 52.2
Aqoxy6G01398 Aquilegia oxysepala HOM05D004101 ORTHO05D005221 2.2e-13 79.0 69 52.2
Nn5g27278 Nelumbo nucifera HOM05D004101 ORTHO05D005221 3.8e-13 78.2 69 52.2
TAR383G0434 Trochodendron aralioides HOM05D004101 ORTHO05D005221 1.2e-11 73.2 70 50.0
Ca_19680_v3 Cicer arietinum L. HOM05D004101 ORTHO05D005221 2.1e-11 72.4 69 50.7
Os08g0110700 Oryza sativa ssp. japonica HOM05D004101 ORTHO05D005221 2.1e-11 72.4 70 52.9
Gohir.A02G087700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 3.5e-11 71.6 71 52.1
Gorai.005G116600 Gossypium raimondii HOM05D004101 ORTHO05D005221 3.5e-11 71.6 71 52.1
Lalb_Chr16g0391261 Lupinus albus HOM05D004101 ORTHO05D005221 3.5e-11 71.6 69 47.8
Dinv36168 Davidia involucrata HOM05D004101 ORTHO05D005221 4.6e-11 71.2 71 50.7
Phvul.011G002700 Phaseolus vulgaris HOM05D004101 ORTHO05D005221 4.6e-11 71.2 75 52.0
TAR625G0099 Trochodendron aralioides HOM05D004101 ORTHO05D005221 4.6e-11 71.2 69 49.3
MELO3C008088.2 Cucumis melo HOM05D004101 ORTHO05D005221 7.8e-11 70.5 78 46.2
HPP92_008552 Vanilla planifolia HOM05D004101 ORTHO05D005221 1.0e-10 70.1 69 52.2
HPP92_008596 Vanilla planifolia HOM05D004101 ORTHO05D005221 1.0e-10 70.1 69 52.2
CiPaw.03G015400 Carya illinoinensis HOM05D004101 ORTHO05D005221 1.3e-10 69.7 70 51.4
Dinv05108 Davidia involucrata HOM05D004101 ORTHO05D005221 1.3e-10 69.7 70 50.0
PSO017G1167 Papaver somniferum HOM05D004101 ORTHO05D005221 1.3e-10 69.7 73 56.2
PSO017G3151 Papaver somniferum HOM05D004101 ORTHO05D005221 1.3e-10 69.7 73 56.2
Zm00001eb174090 Zea mays HOM05D004101 ORTHO05D005221 1.3e-10 69.7 68 55.9
CsaV3_2G033160 Cucumis sativus L. HOM05D004101 ORTHO05D005221 1.7e-10 69.3 78 44.9
PSO170G4791 Papaver somniferum HOM05D004101 ORTHO05D005221 1.7e-10 69.3 70 52.9
arahy.Tifrunner.gnm1.ann1.BP0NKM Arachis hypogaea HOM05D004101 ORTHO05D005221 2.3e-10 68.9 69 47.8
arahy.Tifrunner.gnm1.ann1.FM3HJM Arachis hypogaea HOM05D004101 ORTHO05D005221 2.3e-10 68.9 69 47.8
TPR.G31924 Trifolium pratense HOM05D004101 ORTHO05D005221 2.3e-10 68.9 70 52.9
VMungo1127G2207 Vigna mungo HOM05D004101 ORTHO05D005221 2.3e-10 68.9 75 50.7
Cc10_g08720 Coffea canephora HOM05D004101 ORTHO05D005221 3.0e-10 68.6 69 53.6
Zm00001eb260480 Zea mays HOM05D004101 ORTHO05D005221 3.0e-10 68.6 68 52.9
ATR1089G044 Amborella trichopoda HOM05D004101 ORTHO05D005221 3.9e-10 68.2 70 48.6
Lj3g0009901 Lotus japonicus HOM05D004101 ORTHO05D005221 3.9e-10 68.2 69 47.8
Gorai.009G267200 Gossypium raimondii HOM05D004101 ORTHO05D005221 5.1e-10 67.8 74 50.0
Glyma.09G234500 Glycine max HOM05D004101 ORTHO05D005221 8.7e-10 67.0 71 54.9
Gohir.D05G255660 Gossypium hirsutum HOM05D004101 ORTHO05D005221 8.7e-10 67.0 74 50.0
DCAR_019079 Daucus carota HOM05D004101 ORTHO05D005221 1.1e-09 66.6 69 52.2
Duzib177G1024 Durio zibethinus HOM05D004101 ORTHO05D005221 1.1e-09 66.6 72 51.4
Sabra13G0085500 Salix brachista HOM05D004101 ORTHO05D005221 1.1e-09 66.6 82 47.6
ClCG11G008940 Citrullus lanatus HOM05D004101 ORTHO05D005221 1.5e-09 66.2 69 47.8
Psat7g146680 Pisum sativum HOM05D004101 ORTHO05D005221 1.5e-09 66.2 73 52.1
AUR62022357 Chenopodium quinoa HOM05D004101 ORTHO05D005221 1.9e-09 65.9 73 47.9
Gohir.A05G253700 Gossypium hirsutum HOM05D004101 ORTHO05D005221 1.9e-09 65.9 69 50.7
QL09p002038 Quercus lobata HOM05D004101 ORTHO05D005221 1.9e-09 65.9 75 50.7
QL93p1879_0034 Quercus lobata HOM05D004101 ORTHO05D005221 1.9e-09 65.9 75 50.7
Migut.D00784 Erythranthe guttata HOM05D004101 ORTHO05D005221 2.5e-09 65.5 71 49.3
CSS0032109 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 4.3e-09 64.7 74 44.6
Manes.02G221381 Manihot esculenta HOM05D004101 ORTHO05D005221 4.3e-09 64.7 79 49.4
AUR62034351 Chenopodium quinoa HOM05D004101 ORTHO05D005221 5.6e-09 64.3 73 46.6
ECA234G0584 Erigeron canadensis HOM05D004101 ORTHO05D005221 5.6e-09 64.3 70 45.7
Potri.019G072300 Populus trichocarpa HOM05D004101 ORTHO05D005221 5.6e-09 64.3 77 45.5
BcaB07g32808 Brassica carinata HOM05D004101 ORTHO05D005221 7.3e-09 63.9 79 43.0
Oeu028926.1 Olea europaea HOM05D004101 ORTHO05D005221 7.3e-09 63.9 76 46.1
TWI18G0503 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 7.3e-09 63.9 75 52.0
Thecc.08G177600 Theobroma cacao HOM05D004101 ORTHO05D005221 9.6e-09 63.5 75 50.7
GSVIVG01036377001 Vitis vinifera HOM05D004101 ORTHO05D005221 9.6e-09 63.5 69 44.9
BcaC05g27176 Brassica carinata HOM05D004101 ORTHO05D005221 1.6e-08 62.8 76 43.4
C05p30730 Brassica napus HOM05D004101 ORTHO05D005221 1.6e-08 62.8 76 43.4
BolC5t31805H Brassica oleracea HOM05D004101 ORTHO05D005221 1.6e-08 62.8 76 43.4
CANSAT78G1092 Cannabis sativa HOM05D004101 ORTHO05D005221 1.6e-08 62.8 69 44.9
BraA09t39007Z Brassica rapa HOM05D004101 ORTHO05D005221 2.1e-08 62.4 79 43.0
Cfa008084 Carpinus fangiana HOM05D004101 ORTHO05D005221 2.1e-08 62.4 69 47.8
Manes.18G117901 Manihot esculenta HOM05D004101 ORTHO05D005221 2.1e-08 62.4 69 49.3
Potri.013G099700 Populus trichocarpa HOM05D004101 ORTHO05D005221 2.1e-08 62.4 76 46.1
PGR042G3616 Punica granatum HOM05D004101 ORTHO05D005221 2.1e-08 62.4 70 48.6
Aa31LG2G14460 Aethionema arabicum HOM05D004101 ORTHO05D005221 2.8e-08 62.0 76 46.1
SGA_v2.0_scaffold158G37476 Striga asiatica HOM05D004101 ORTHO05D005221 2.8e-08 62.0 73 49.3
Haze_13953 Corylus avellana HOM05D004101 ORTHO05D005221 3.6e-08 61.6 69 46.4
Lj2A387G43 Lonicera japonica HOM05D004101 ORTHO05D005221 3.6e-08 61.6 69 49.3
Ciclev10018750m.g Citrus clementina HOM05D004101 ORTHO05D005221 6.2e-08 60.8 70 50.0
COL.COLO4_06914 Corchorus olitorius HOM05D004101 ORTHO05D005221 6.2e-08 60.8 72 50.0
Lj9A698G58 Lonicera japonica HOM05D004101 ORTHO05D005221 6.2e-08 60.8 70 47.1
vmacro17836 Vaccinium macrocarpon HOM05D004101 ORTHO05D005221 8.1e-08 60.5 71 46.5
CSS0023016 Camellia sinensis var. sinensis HOM05D004101 ORTHO05D005221 1.1e-07 60.1 69 44.9
Solyc01g008320.3 Solanum lycopersicum HOM05D004101 ORTHO05D005221 1.1e-07 60.1 71 46.5
Sopen01g003840 Solanum pennellii HOM05D004101 ORTHO05D005221 1.1e-07 60.1 71 46.5
unitig_8.g3682 Utricularia gibba HOM05D004101 ORTHO05D005221 1.1e-07 60.1 70 50.0
MSTRG.12725 Avicennia marina HOM05D004101 ORTHO05D005221 1.4e-07 59.7 69 46.4
Migut.N00699 Erythranthe guttata HOM05D004101 ORTHO05D005221 1.4e-07 59.7 72 45.8
Sp1g27280 Schrenkiella parvula HOM05D004101 ORTHO05D005221 1.4e-07 59.7 80 42.5
AL1G49570 Arabidopsis lyrata HOM05D004101 ORTHO05D005221 1.8e-07 59.3 85 42.4
Medtr4g033490 Medicago truncatula HOM05D004101 ORTHO05D005221 1.8e-07 59.3 69 43.5
TWI12G0255 Tripterygium wilfordii HOM05D004101 ORTHO05D005221 1.8e-07 59.3 70 45.7
CAN.G282.41 Capsicum annuum HOM05D004101 ORTHO05D005221 2.4e-07 58.9 71 47.9
Atru.chr13.2487 Acer truncatum HOM05D004101 ORTHO05D005221 3.1e-07 58.5 72 45.8
Atru.chr13.2489 Acer truncatum HOM05D004101 ORTHO05D005221 3.1e-07 58.5 72 45.8
Atru.chr13.2501 Acer truncatum HOM05D004101 ORTHO05D005221 3.1e-07 58.5 72 45.8
Eucgr.F02954 Eucalyptus grandis HOM05D004101 ORTHO05D005221 3.1e-07 58.5 71 46.5
Aa31LG9G15840 Aethionema arabicum HOM05D004101 ORTHO05D005221 5.3e-07 57.8 71 49.3
AT1G31480 Arabidopsis thaliana HOM05D004101 ORTHO05D005221 5.3e-07 57.8 79 41.8
BcaC07g37755 Brassica carinata HOM05D004101 ORTHO05D005221 5.3e-07 57.8 79 41.8
A08p10530 Brassica napus HOM05D004101 ORTHO05D005221 5.3e-07 57.8 79 41.8
BolC8t48140H Brassica oleracea HOM05D004101 ORTHO05D005221 5.3e-07 57.8 79 41.8
BraA08t33053Z Brassica rapa HOM05D004101 ORTHO05D005221 5.3e-07 57.8 79 41.8
SalBow2G0849 Salvia bowleyana HOM05D004101 ORTHO05D005221 5.3e-07 57.8 74 43.2
Actinidia29382 Actinidia chinensis HOM05D004101 ORTHO05D005221 6.9e-07 57.4 69 43.5
SGA_v2.0_scaffold120G33012 Striga asiatica HOM05D004101 ORTHO05D005221 9.0e-07 57.0 75 44.0
Thhalv10006721m.g Eutrema salsugineum HOM05D004101 ORTHO05D005221 1.2e-06 56.6 79 39.2
Rhsim08G0116000 Rhododendron simsii HOM05D004101 ORTHO05D005221 1.2e-06 56.6 73 49.3
Sed0018643 Sechium edule HOM05D004101 ORTHO05D005221 1.5e-06 56.2 61 49.2
Prupe.1G442600 Prunus persica HOM05D004101 ORTHO05D005221 2.0e-06 55.8 74 44.6
BcaB04g18153 Brassica carinata HOM05D004101 ORTHO05D005221 2.6e-06 55.5 81 39.5
Hund26650 Selenicereus undatus HOM05D004101 ORTHO05D005221 4.4e-06 54.7 75 41.3
Carub.0001s2990 Capsella rubella HOM05D004101 ORTHO05D005221 5.8e-06 54.3 80 41.2
EL10Ac1g01668 Beta vulgaris HOM05D004101 ORTHO05D005221 9.9e-06 53.5 67 46.3


User provided reference genes

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