Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1070 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 8.1e-94 347.1 173 100.0
CDE09G1065 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 1.6e-62 243.0 143 83.9
MBI13_g13129_MAGBIO Magnolia biondii HOM05D004369 ORTHO05D004907 1.6e-20 103.6 147 42.9
CDE04G0994 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 4.5e-20 102.1 136 41.9
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 7.7e-20 101.3 154 44.2
CDE02G4522 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 1.0e-19 100.9 132 42.4
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 5.0e-19 98.6 138 48.6
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 6.5e-19 98.2 139 46.8
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 1.6e-17 93.6 142 48.6
Nn7g37071 Nelumbo nucifera HOM05D004369 ORTHO05D004907 2.7e-17 92.8 137 46.7
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 6.1e-17 91.7 148 41.2
PGR042G0777 Punica granatum HOM05D004369 ORTHO05D004907 6.1e-17 91.7 147 43.5
CiPaw.10G044100 Carya illinoinensis HOM05D004369 ORTHO05D004907 3.0e-16 89.4 146 41.8
DCAR_013523 Daucus carota HOM05D004369 ORTHO05D004907 3.0e-16 89.4 138 44.2
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 5.2e-16 88.6 140 42.9
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 5.2e-16 88.6 150 44.0
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 6.8e-16 88.2 137 47.4
Glyma.03G120700 Glycine max HOM05D004369 ORTHO05D004907 6.8e-16 88.2 133 45.1
Solyc10g077130.1 Solanum lycopersicum HOM05D004369 ORTHO05D004907 6.8e-16 88.2 145 42.1
Duzib106G1975 Durio zibethinus HOM05D004369 ORTHO05D004907 8.8e-16 87.8 151 40.4
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 8.8e-16 87.8 140 42.9
CiPaw.12G092400 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.5e-15 87.0 148 43.9
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.5e-15 87.0 140 42.9
Nitab4.5_0000062g0280 Nicotiana tabacum HOM05D004369 ORTHO05D004907 2.0e-15 86.7 140 40.0
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 2.0e-15 86.7 143 42.7
Sopen10g028810 Solanum pennellii HOM05D004369 ORTHO05D004907 2.0e-15 86.7 145 41.4
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 2.6e-15 86.3 159 42.1
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 2.6e-15 86.3 120 41.7
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 3.4e-15 85.9 131 43.5
CiPaw.09G052400 Carya illinoinensis HOM05D004369 ORTHO05D004907 3.4e-15 85.9 155 42.6
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 3.4e-15 85.9 133 45.1
Atru.chr1.1512 Acer truncatum HOM05D004369 ORTHO05D004907 4.4e-15 85.5 146 41.1
PGSC0003DMG400028198 Solanum tuberosum HOM05D004369 ORTHO05D004907 4.4e-15 85.5 155 38.7
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 5.7e-15 85.1 128 43.8
Thecc.05G119700 Theobroma cacao HOM05D004369 ORTHO05D004907 5.7e-15 85.1 171 40.4
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 7.5e-15 84.7 169 37.9
TWI53G1196 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 7.5e-15 84.7 158 41.8
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 9.8e-15 84.3 138 42.8
Sc19g0007900 Simmondsia chinensis HOM05D004369 ORTHO05D004907 9.8e-15 84.3 133 42.1
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 1.3e-14 84.0 148 40.5
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 1.7e-14 83.6 184 37.0
Peaxi162Scf00607g00054 Petunia axillaris HOM05D004369 ORTHO05D004907 2.8e-14 82.8 155 38.7
Cc00_g08990 Coffea canephora HOM05D004369 ORTHO05D004907 3.7e-14 82.4 151 42.4
Duzib128G0931 Durio zibethinus HOM05D004369 ORTHO05D004907 3.7e-14 82.4 158 39.9
Potri.006G032300 Populus trichocarpa HOM05D004369 ORTHO05D004907 3.7e-14 82.4 175 37.7
PGSC0003DMG400007200 Solanum tuberosum HOM05D004369 ORTHO05D004907 3.7e-14 82.4 148 40.5
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 8.3e-14 81.3 145 39.3
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 8.3e-14 81.3 149 40.3
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 8.3e-14 81.3 157 38.2
Glyma.19G125300 Glycine max HOM05D004369 ORTHO05D004907 1.1e-13 80.9 129 42.6
Nitab4.5_0000123g0220 Nicotiana tabacum HOM05D004369 ORTHO05D004907 1.1e-13 80.9 140 39.3
Oeu044231.1 Olea europaea HOM05D004369 ORTHO05D004907 1.1e-13 80.9 140 40.0
MSTRG.6296 Avicennia marina HOM05D004369 ORTHO05D004907 1.4e-13 80.5 142 38.7
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 2.4e-13 79.7 162 37.0
Nitab4.5_0001270g0170 Nicotiana tabacum HOM05D004369 ORTHO05D004907 2.4e-13 79.7 140 39.3
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 3.1e-13 79.3 161 37.9
Sopen10g031550 Solanum pennellii HOM05D004369 ORTHO05D004907 3.1e-13 79.3 178 36.5
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 4.1e-13 79.0 159 37.1
VMungo1383G1978 Vigna mungo HOM05D004369 ORTHO05D004907 4.1e-13 79.0 147 38.8
Ah.04g150390 Amaranthus hybridus HOM05D004369 ORTHO05D004907 5.4e-13 78.6 134 40.3
Ah.13g077330 Amaranthus hybridus HOM05D004369 ORTHO05D004907 5.4e-13 78.6 150 39.3
FvH4_6g07790 Fragaria vesca HOM05D004369 ORTHO05D004907 5.4e-13 78.6 141 42.6
Oeu023004.1 Olea europaea HOM05D004369 ORTHO05D004907 5.4e-13 78.6 162 41.4
HPP92_012446 Vanilla planifolia HOM05D004369 ORTHO05D004907 5.4e-13 78.6 126 38.1
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 7.0e-13 78.2 141 42.6
CANSAT80G1482 Cannabis sativa HOM05D004369 ORTHO05D004907 9.1e-13 77.8 124 45.2
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 9.1e-13 77.8 141 40.4
RcHm_v2.0_Chr3g0457501 Rosa chinensis HOM05D004369 ORTHO05D004907 9.1e-13 77.8 138 40.6
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 1.2e-12 77.4 145 36.6
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 1.2e-12 77.4 159 38.4
FAN09G2868 Fragaria x ananassa HOM05D004369 ORTHO05D004907 1.6e-12 77.0 141 41.1
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.6e-12 77.0 163 39.3
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 2.0e-12 76.6 163 38.7
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 2.0e-12 76.6 163 38.7
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 2.0e-12 76.6 136 39.7
Sabra06G0021600 Salix brachista HOM05D004369 ORTHO05D004907 2.7e-12 76.3 198 33.3
MELO3C009728.2 Cucumis melo HOM05D004369 ORTHO05D004907 5.9e-12 75.1 156 38.5
Psat0ss9348g0120 Pisum sativum HOM05D004369 ORTHO05D004907 5.9e-12 75.1 136 39.7
AUR62021003 Chenopodium quinoa HOM05D004369 ORTHO05D004907 7.7e-12 74.7 170 36.5
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 7.7e-12 74.7 141 41.1
Lalb_Chr14g0365411 Lupinus albus HOM05D004369 ORTHO05D004907 7.7e-12 74.7 137 40.1
THA.LOC104815333 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 1.0e-11 74.3 152 36.8
ATR1096G063 Amborella trichopoda HOM05D004369 ORTHO05D004907 2.2e-11 73.2 146 39.7
QL07p014155 Quercus lobata HOM05D004369 ORTHO05D004907 3.8e-11 72.4 141 39.7
BcaC02g12874 Brassica carinata HOM05D004369 ORTHO05D004907 5.0e-11 72.0 138 39.1
C04p68730 Brassica napus HOM05D004369 ORTHO05D004907 6.5e-11 71.6 138 39.1
BolC4t28378H Brassica oleracea HOM05D004369 ORTHO05D004907 6.5e-11 71.6 138 39.1
Medtr7g088620 Medicago truncatula HOM05D004369 ORTHO05D004907 6.5e-11 71.6 137 38.0
Oeu060762.1 Olea europaea HOM05D004369 ORTHO05D004907 6.5e-11 71.6 139 37.4
A09p49750 Brassica napus HOM05D004369 ORTHO05D004907 1.9e-10 70.1 150 40.7
BraA09t40428Z Brassica rapa HOM05D004369 ORTHO05D004907 1.9e-10 70.1 150 40.7
CsaV3_3G039860 Cucumis sativus L. HOM05D004369 ORTHO05D004907 3.2e-10 69.3 142 36.6
Thhalv10017173m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 3.2e-10 69.3 156 34.6
Gohir.A11G305600 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.2e-10 68.9 151 39.1
Oeu057811.1 Olea europaea HOM05D004369 ORTHO05D004907 4.2e-10 68.9 128 42.2
HanXRQChr09g0258571 Helianthus annuus HOM05D004369 ORTHO05D004907 7.2e-10 68.2 117 45.3
Lalb_Chr24g0400611 Lupinus albus HOM05D004369 ORTHO05D004907 9.4e-10 67.8 124 39.5
Oeu034750.1 Olea europaea HOM05D004369 ORTHO05D004907 9.4e-10 67.8 140 42.1
AUR62018430 Chenopodium quinoa HOM05D004369 ORTHO05D004907 1.2e-09 67.4 165 36.4
Oeu009515.1 Olea europaea HOM05D004369 ORTHO05D004907 1.2e-09 67.4 148 37.8
Oeu034749.1 Olea europaea HOM05D004369 ORTHO05D004907 1.2e-09 67.4 145 41.4
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 1.2e-09 67.4 168 35.7
MSTRG.26187 Avicennia marina HOM05D004369 ORTHO05D004907 1.6e-09 67.0 135 34.8
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 2.1e-09 66.6 158 34.8
BcaC07g40000 Brassica carinata HOM05D004369 ORTHO05D004907 2.7e-09 66.2 150 39.3
C08p32120 Brassica napus HOM05D004369 ORTHO05D004907 2.7e-09 66.2 150 39.3
BraA04t18590Z Brassica rapa HOM05D004369 ORTHO05D004907 3.6e-09 65.9 144 37.5
Gorai.007G351200 Gossypium raimondii HOM05D004369 ORTHO05D004907 3.6e-09 65.9 150 38.7
BolC8t50831H Brassica oleracea HOM05D004369 ORTHO05D004907 6.1e-09 65.1 150 38.7
A04p31330 Brassica napus HOM05D004369 ORTHO05D004907 8.0e-09 64.7 148 35.8
DCAR_020610 Daucus carota HOM05D004369 ORTHO05D004907 1.4e-08 63.9 56 57.1
Gohir.D11G321000 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.4e-08 63.9 150 38.0
Sp5g05710 Schrenkiella parvula HOM05D004369 ORTHO05D004907 1.4e-08 63.9 161 37.3
BcaB02g08344 Brassica carinata HOM05D004369 ORTHO05D004907 1.8e-08 63.5 155 39.4
BcaC07g40111 Brassica carinata HOM05D004369 ORTHO05D004907 1.8e-08 63.5 143 39.2
BraA04t16076Z Brassica rapa HOM05D004369 ORTHO05D004907 1.8e-08 63.5 152 38.2
CAN.G128.96 Capsicum annuum HOM05D004369 ORTHO05D004907 1.8e-08 63.5 64 53.1
PSO384G0208 Papaver somniferum HOM05D004369 ORTHO05D004907 1.8e-08 63.5 145 35.9
CARHR136130 Cardamine hirsuta HOM05D004369 ORTHO05D004907 2.3e-08 63.2 148 35.8
Carub.0005s2361 Capsella rubella HOM05D004369 ORTHO05D004907 3.0e-08 62.8 161 34.8
THA.LOC104803243 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 3.0e-08 62.8 145 37.9
TPR.G22743 Trifolium pratense HOM05D004369 ORTHO05D004907 3.0e-08 62.8 52 65.4
A04p03590 Brassica napus HOM05D004369 ORTHO05D004907 6.8e-08 61.6 152 35.5
Eucgr.A02182 Eucalyptus grandis HOM05D004369 ORTHO05D004907 8.8e-08 61.2 53 58.5
PSO339G3328 Papaver somniferum HOM05D004369 ORTHO05D004907 8.8e-08 61.2 145 35.2
Sc25g0005580 Simmondsia chinensis HOM05D004369 ORTHO05D004907 1.2e-07 60.8 62 51.6
Lalb_Chr22g0357981 Lupinus albus HOM05D004369 ORTHO05D004907 1.5e-07 60.5 133 39.1
Sp4g23330 Schrenkiella parvula HOM05D004369 ORTHO05D004907 1.5e-07 60.5 59 52.5
THA.LOC104824387 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 1.5e-07 60.5 146 32.9
Carub.0004s2334 Capsella rubella HOM05D004369 ORTHO05D004907 3.4e-07 59.3 59 54.2
CAN.G959.22 Capsicum annuum HOM05D004369 ORTHO05D004907 3.4e-07 59.3 58 55.2
Thhalv10006505m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 3.4e-07 59.3 154 34.4
Eucgr.K01686 Eucalyptus grandis HOM05D004369 ORTHO05D004907 4.4e-07 58.9 52 59.6
Migut.K00167 Erythranthe guttata HOM05D004369 ORTHO05D004907 5.7e-07 58.5 123 35.8
Peaxi162Scf00003g05315 Petunia axillaris HOM05D004369 ORTHO05D004907 7.5e-07 58.2 135 34.8
Sed0018866 Sechium edule HOM05D004369 ORTHO05D004907 9.8e-07 57.8 74 48.6
Aa31LG10G11730 Aethionema arabicum HOM05D004369 ORTHO05D004907 2.2e-06 56.6 74 52.7
AL4G38990 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 2.8e-06 56.2 72 47.2
AL5G38270 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 2.8e-06 56.2 74 51.4
AT2G41010 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 4.9e-06 55.5 73 46.6
CARHR167030 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.9e-06 55.5 64 53.1
BcaC02g09876 Brassica carinata HOM05D004369 ORTHO05D004907 8.3e-06 54.7 61 52.5
C04p35650 Brassica napus HOM05D004369 ORTHO05D004907 8.3e-06 54.7 61 52.5
BolC4t25239H Brassica oleracea HOM05D004369 ORTHO05D004907 8.3e-06 54.7 61 52.5


User provided reference genes

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