Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1048 Ceratophyllum demersum HOM05D004630 ORTHO05D005727 1.4e-60 236.1 117 100.0
GSVIVG01034228001 Vitis vinifera HOM05D004630 ORTHO05D005727 4.1e-25 118.2 122 48.4
TAR636G2703 Trochodendron aralioides HOM05D004630 ORTHO05D005727 7.0e-25 117.5 120 48.3
MBI05_g35190_MAGBIO Magnolia biondii HOM05D004630 ORTHO05D005727 2.0e-24 115.9 123 48.0
MD13G1136600 Malus domestica HOM05D004630 ORTHO05D005727 1.7e-23 112.8 120 46.7
Aqoxy7G01739 Aquilegia oxysepala HOM05D004630 ORTHO05D005727 3.9e-23 111.7 120 47.5
Haze_25597 Corylus avellana HOM05D004630 ORTHO05D005727 1.5e-22 109.8 113 48.7
Cfa003362 Carpinus fangiana HOM05D004630 ORTHO05D005727 1.9e-22 109.4 113 48.7
RcHm_v2.0_Chr4g0428061 Rosa chinensis HOM05D004630 ORTHO05D005727 2.5e-22 109.0 120 45.8
MELO3C002801.2 Cucumis melo HOM05D004630 ORTHO05D005727 3.3e-22 108.6 116 48.3
MD16G1131900 Malus domestica HOM05D004630 ORTHO05D005727 4.3e-22 108.2 120 43.3
FvH4_4g21830 Fragaria vesca HOM05D004630 ORTHO05D005727 2.8e-21 105.5 120 44.2
FAN12G0960 Fragaria x ananassa HOM05D004630 ORTHO05D005727 2.8e-21 105.5 120 44.2
Nn7g38087 Nelumbo nucifera HOM05D004630 ORTHO05D005727 3.6e-21 105.1 119 44.5
ATR0019G053 Amborella trichopoda HOM05D004630 ORTHO05D005727 4.7e-21 104.8 118 44.9
Prupe.1G208800 Prunus persica HOM05D004630 ORTHO05D005727 6.2e-21 104.4 120 44.2
FAN07G0643 Fragaria x ananassa HOM05D004630 ORTHO05D005727 8.0e-21 104.0 120 43.3
Cpa.g.sc80.32 Carica papaya HOM05D004630 ORTHO05D005727 1.1e-20 103.6 120 41.7
ClCG03G006320 Citrullus lanatus HOM05D004630 ORTHO05D005727 1.4e-20 103.2 120 42.5
QL02p088183 Quercus lobata HOM05D004630 ORTHO05D005727 3.1e-20 102.1 118 44.9
Hma1.2p1_0482F.1_g162686 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 4.0e-20 101.7 114 43.9
Hma1.2p1_0482F.1_g162689 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 4.0e-20 101.7 114 43.9
Hma1.2p1_1944F.1_g308560 Hydrangea macrophylla HOM05D004630 ORTHO05D005727 4.0e-20 101.7 114 43.9
Atru.chr1.2080 Acer truncatum HOM05D004630 ORTHO05D005727 1.2e-19 100.1 120 44.2
Oeu028192.1 Olea europaea HOM05D004630 ORTHO05D005727 2.0e-19 99.4 114 43.9
Solyc07g014610.4 Solanum lycopersicum HOM05D004630 ORTHO05D005727 2.0e-19 99.4 111 45.0
CSS0009392 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 2.6e-19 99.0 114 47.4
CSS0039221 Camellia sinensis var. sinensis HOM05D004630 ORTHO05D005727 2.6e-19 99.0 114 47.4
CsaV3_1G037410 Cucumis sativus L. HOM05D004630 ORTHO05D005727 2.6e-19 99.0 115 43.5
Sabra03G0033900 Salix brachista HOM05D004630 ORTHO05D005727 2.6e-19 99.0 117 43.6
Sopen07g005480 Solanum pennellii HOM05D004630 ORTHO05D005727 2.6e-19 99.0 111 45.0
arahy.Tifrunner.gnm1.ann1.W5Q7UV Arachis hypogaea HOM05D004630 ORTHO05D005727 3.4e-19 98.6 116 45.7
Cc03_g11340 Coffea canephora HOM05D004630 ORTHO05D005727 3.4e-19 98.6 125 46.4
arahy.Tifrunner.gnm1.ann1.N7874Q Arachis hypogaea HOM05D004630 ORTHO05D005727 4.4e-19 98.2 116 45.7
Ciclev10018715m.g Citrus clementina HOM05D004630 ORTHO05D005727 4.4e-19 98.2 122 42.6
CANSAT11G0088 Cannabis sativa HOM05D004630 ORTHO05D005727 7.5e-19 97.4 113 44.2
Lalb_Chr12g0200461 Lupinus albus HOM05D004630 ORTHO05D005727 7.5e-19 97.4 115 45.2
PGR031G0128 Punica granatum HOM05D004630 ORTHO05D005727 7.5e-19 97.4 116 41.4
Rhsim10G0128800 Rhododendron simsii HOM05D004630 ORTHO05D005727 7.5e-19 97.4 112 43.8
Hund12270 Selenicereus undatus HOM05D004630 ORTHO05D005727 7.5e-19 97.4 116 41.4
TPR.G12666 Trifolium pratense HOM05D004630 ORTHO05D005727 7.5e-19 97.4 111 45.0
CAN.G689.26 Capsicum annuum HOM05D004630 ORTHO05D005727 9.8e-19 97.1 111 45.9
Manes.11G127500 Manihot esculenta HOM05D004630 ORTHO05D005727 2.2e-18 95.9 120 41.7
AUR62010786 Chenopodium quinoa HOM05D004630 ORTHO05D005727 2.9e-18 95.5 122 40.2
Ca_21358_v3 Cicer arietinum L. HOM05D004630 ORTHO05D005727 2.9e-18 95.5 117 42.7
Potri.003G059300 Populus trichocarpa HOM05D004630 ORTHO05D005727 2.9e-18 95.5 117 41.9
Duzib187G1410 Durio zibethinus HOM05D004630 ORTHO05D005727 3.7e-18 95.1 114 44.7
PSO210G5682 Papaver somniferum HOM05D004630 ORTHO05D005727 3.7e-18 95.1 112 46.4
SEGI_25015 Sequoiadendron giganteum HOM05D004630 ORTHO05D005727 3.7e-18 95.1 124 37.9
AUR62019782 Chenopodium quinoa HOM05D004630 ORTHO05D005727 6.4e-18 94.4 122 40.2
Psat4g020520 Pisum sativum HOM05D004630 ORTHO05D005727 6.4e-18 94.4 111 43.2
Thecc.07G164200 Theobroma cacao HOM05D004630 ORTHO05D005727 6.4e-18 94.4 120 42.5
vmacro00088 Vaccinium macrocarpon HOM05D004630 ORTHO05D005727 6.4e-18 94.4 114 44.7
Lj4g0015635 Lotus japonicus HOM05D004630 ORTHO05D005727 8.3e-18 94.0 114 43.9
SalBow5G1401 Salvia bowleyana HOM05D004630 ORTHO05D005727 8.3e-18 94.0 122 41.0
SalBow7G2764 Salvia bowleyana HOM05D004630 ORTHO05D005727 8.3e-18 94.0 122 41.0
Ah.12g052160 Amaranthus hybridus HOM05D004630 ORTHO05D005727 1.1e-17 93.6 120 40.0
Lj2g0001674 Lotus japonicus HOM05D004630 ORTHO05D005727 1.9e-17 92.8 114 43.9
Medtr4g123557 Medicago truncatula HOM05D004630 ORTHO05D005727 2.4e-17 92.4 110 45.5
MSTRG.13783 Avicennia marina HOM05D004630 ORTHO05D005727 3.2e-17 92.0 114 41.2
CiPaw.04G170700 Carya illinoinensis HOM05D004630 ORTHO05D005727 3.2e-17 92.0 114 43.0
Eucgr.B01002 Eucalyptus grandis HOM05D004630 ORTHO05D005727 3.2e-17 92.0 113 41.6
Nitab4.5_0004432g0030 Nicotiana tabacum HOM05D004630 ORTHO05D005727 3.2e-17 92.0 113 43.4
Nitab4.5_0000848g0070 Nicotiana tabacum HOM05D004630 ORTHO05D005727 4.1e-17 91.7 112 43.8
DCAR_009035 Daucus carota HOM05D004630 ORTHO05D005727 5.4e-17 91.3 115 44.3
Migut.N03011 Erythranthe guttata HOM05D004630 ORTHO05D005727 5.4e-17 91.3 111 43.2
Gohir.D01G081000 Gossypium hirsutum HOM05D004630 ORTHO05D005727 5.4e-17 91.3 116 42.2
Gorai.002G105900 Gossypium raimondii HOM05D004630 ORTHO05D005727 5.4e-17 91.3 116 42.2
Sed0000779 Sechium edule HOM05D004630 ORTHO05D005727 5.4e-17 91.3 115 40.9
SalBow6G4274 Salvia bowleyana HOM05D004630 ORTHO05D005727 1.2e-16 90.1 122 40.2
Actinidia37297 Actinidia chinensis HOM05D004630 ORTHO05D005727 1.6e-16 89.7 120 41.7
EL10Ac5g12859 Beta vulgaris HOM05D004630 ORTHO05D005727 1.6e-16 89.7 121 38.0
Phvul.003G124900 Phaseolus vulgaris HOM05D004630 ORTHO05D005727 1.6e-16 89.7 112 42.9
COL.COLO4_38353 Corchorus olitorius HOM05D004630 ORTHO05D005727 2.7e-16 89.0 116 42.2
SalBow2G2706 Salvia bowleyana HOM05D004630 ORTHO05D005727 2.7e-16 89.0 122 40.2
Actinidia21906 Actinidia chinensis HOM05D004630 ORTHO05D005727 4.6e-16 88.2 120 41.7
Actinidia21669 Actinidia chinensis HOM05D004630 ORTHO05D005727 6.0e-16 87.8 120 41.7
Actinidia28193 Actinidia chinensis HOM05D004630 ORTHO05D005727 6.0e-16 87.8 120 41.7
HanXRQChr17g0554761 Helianthus annuus HOM05D004630 ORTHO05D005727 6.0e-16 87.8 114 42.1
Dinv43828 Davidia involucrata HOM05D004630 ORTHO05D005727 1.0e-15 87.0 79 51.9
Sc13g0008160 Simmondsia chinensis HOM05D004630 ORTHO05D005727 1.3e-15 86.7 112 39.3
Peaxi162Scf00341g00622 Petunia axillaris HOM05D004630 ORTHO05D005727 1.7e-15 86.3 116 41.4
Glyma.13G116800 Glycine max HOM05D004630 ORTHO05D005727 2.3e-15 85.9 113 42.5
Aa31LG11G12420 Aethionema arabicum HOM05D004630 ORTHO05D005727 2.5e-14 82.4 118 39.8
Os10g0170300 Oryza sativa ssp. japonica HOM05D004630 ORTHO05D005727 3.3e-14 82.0 117 36.8
THA.LOC104820866 Tarenaya hassleriana HOM05D004630 ORTHO05D005727 1.2e-13 80.1 121 38.8
VMungo1215G1222 Vigna mungo HOM05D004630 ORTHO05D005727 1.2e-13 80.1 113 40.7
Carub.0006s1544 Capsella rubella HOM05D004630 ORTHO05D005727 3.6e-13 78.6 122 37.7
BcaB08g36795 Brassica carinata HOM05D004630 ORTHO05D005727 4.0e-12 75.1 119 37.0
BcaC04g18817 Brassica carinata HOM05D004630 ORTHO05D005727 5.2e-12 74.7 119 37.8
C09p59940 Brassica napus HOM05D004630 ORTHO05D005727 5.2e-12 74.7 119 37.8
BolC9t58830H Brassica oleracea HOM05D004630 ORTHO05D005727 5.2e-12 74.7 119 37.8
ECA233G2342 Erigeron canadensis HOM05D004630 ORTHO05D005727 5.2e-12 74.7 85 45.9
BraA10t44274Z Brassica rapa HOM05D004630 ORTHO05D005727 6.8e-12 74.3 122 38.5
A10p22150 Brassica napus HOM05D004630 ORTHO05D005727 2.0e-11 72.8 119 37.8
AL6G28300 Arabidopsis lyrata HOM05D004630 ORTHO05D005727 2.6e-11 72.4 122 37.7
AT5G17250 Arabidopsis thaliana HOM05D004630 ORTHO05D005727 2.6e-11 72.4 122 36.9
Sp6g26980 Schrenkiella parvula HOM05D004630 ORTHO05D005727 3.4e-11 72.0 119 35.3
CARHR195960 Cardamine hirsuta HOM05D004630 ORTHO05D005727 5.8e-11 71.2 123 34.1
SHI11357 Sapria himalayana HOM05D004630 ORTHO05D005727 2.9e-10 68.9 116 28.4
Thhalv10012592m.g Eutrema salsugineum HOM05D004630 ORTHO05D005727 4.1e-09 65.1 119 33.6
unitig_578.g16518 Utricularia gibba HOM05D004630 ORTHO05D005727 4.1e-09 65.1 75 41.3
AagrBONN_evm.TU.Sc2ySwM_344.4351 Anthoceros agrestis HOM05D004630 ORTHO05D005727 7.1e-09 64.3 115 33.9
Migut.O00493 Erythranthe guttata HOM05D004630 ORTHO05D005727 9.2e-09 63.9 70 44.3
Rhsim05G0234800 Rhododendron simsii HOM05D004630 ORTHO05D005727 1.2e-08 63.5 69 44.9
Lsat_1_v5_gn_8_137620 Lactuca sativa HOM05D004630 ORTHO05D005727 1.6e-08 63.2 118 33.1
Gohir.A01G096750 Gossypium hirsutum HOM05D004630 ORTHO05D005727 2.1e-08 62.8 74 43.2
Lj9C588T4 Lonicera japonica HOM05D004630 ORTHO05D005727 4.6e-08 61.6 75 41.3
Pp3c19_7340 Physcomitrium patens HOM05D004630 ORTHO05D005727 7.3e-06 54.3 129 27.9
SMO116G0486 Selaginella moellendorffii HOM05D004630 ORTHO05D005727 9.5e-06 53.9 70 31.4


User provided reference genes

Program Settings