Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 2.9e-160 568.5 294 100.0
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 5.9e-153 544.3 294 96.3
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 1.7e-115 419.9 296 75.3
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 2.2e-115 419.5 299 73.2
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 3.7e-115 418.7 305 73.4
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.4e-114 416.8 298 73.8
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 5.4e-114 414.8 295 72.5
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.2e-113 413.7 300 73.0
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.6e-113 413.3 300 74.0
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 3.5e-113 412.1 300 73.7
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 4.5e-113 411.8 299 72.6
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 4.5e-113 411.8 300 73.0
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 2.2e-112 409.5 300 73.0
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 2.2e-112 409.5 301 72.1
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 8.5e-112 407.5 299 73.6
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 1.1e-111 407.1 301 73.8
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 3.2e-111 405.6 301 72.8
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 3.2e-111 405.6 299 71.6
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 3.2e-111 405.6 300 73.7
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 5.5e-111 404.8 297 73.1
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.2e-110 403.7 301 72.1
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 2.1e-110 402.9 299 71.9
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 2.1e-110 402.9 297 72.1
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.7e-110 402.5 300 72.0
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 3.6e-110 402.1 297 73.1
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 4.7e-110 401.7 299 71.6
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 1.0e-109 400.6 299 70.9
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 1.4e-109 400.2 299 72.9
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 3.0e-109 399.1 299 72.2
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 3.0e-109 399.1 299 72.6
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 4.0e-109 398.7 299 71.6
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 4.0e-109 398.7 298 71.1
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 6.8e-109 397.9 301 72.1
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 6.8e-109 397.9 299 71.2
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 8.8e-109 397.5 296 73.0
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.6e-108 396.0 294 70.1
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 2.6e-108 396.0 299 69.9
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 3.4e-108 395.6 299 71.9
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 4.4e-108 395.2 297 71.0
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 4.4e-108 395.2 296 72.0
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 9.8e-108 394.0 306 71.2
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 9.8e-108 394.0 301 70.8
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.3e-107 393.7 299 71.9
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.3e-107 393.7 296 71.6
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.8e-107 392.5 299 71.9
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 8.3e-107 391.0 301 70.8
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.1e-106 390.6 299 71.6
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.1e-106 390.6 299 71.6
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.1e-106 390.6 301 71.8
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 5.4e-106 388.3 299 69.6
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 7.0e-106 387.9 296 69.6
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.6e-105 386.7 296 70.9
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 2.0e-105 386.3 299 71.2
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 5.9e-105 384.8 303 70.0
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 5.9e-105 384.8 301 69.1
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.0e-104 384.0 302 69.2
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 1.0e-104 384.0 228 84.6
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 2.3e-104 382.9 300 69.0
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 2.9e-104 382.5 296 70.9
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.8e-104 382.1 301 69.4
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 5.0e-104 381.7 303 68.6
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 5.0e-104 381.7 307 68.4
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 6.6e-104 381.3 301 69.4
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 8.6e-104 380.9 298 70.8
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 1.1e-103 380.6 300 69.0
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.1e-103 380.6 295 71.2
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.5e-103 380.2 303 68.6
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 1.5e-103 380.2 295 70.5
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.9e-103 379.8 301 69.1
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 4.3e-103 378.6 300 67.3
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 4.3e-103 378.6 315 66.0
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.3e-103 378.6 301 69.1
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 4.3e-103 378.6 300 68.3
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 9.5e-103 377.5 301 68.8
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 9.5e-103 377.5 298 70.1
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 1.2e-102 377.1 237 81.4
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.6e-102 376.7 301 68.8
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.6e-102 376.7 299 68.6
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 2.1e-102 376.3 294 69.0
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 2.8e-102 375.9 294 68.4
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 2.8e-102 375.9 295 68.8
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.3e-101 372.9 300 66.7
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 3.0e-101 372.5 300 68.0
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 6.8e-101 371.3 296 68.2
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 2.0e-100 369.8 299 67.9
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 5.7e-100 368.2 301 66.4
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 5.7e-100 368.2 262 73.3
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 7.5e-100 367.9 294 68.4
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 9.8e-100 367.5 295 68.5
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 1.3e-99 367.1 294 67.7
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 1.3e-99 367.1 294 67.7
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 1.3e-99 367.1 294 67.7
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 1.3e-99 367.1 230 81.3
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 2.9e-99 365.9 294 67.7
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 2.9e-99 365.9 294 67.7
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 6.4e-99 364.8 298 66.4
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 6.4e-99 364.8 296 64.9
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 8.3e-99 364.4 301 67.1
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 8.3e-99 364.4 300 65.0
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 2.4e-98 362.8 299 67.2
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.4e-98 362.8 294 67.7
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 4.1e-98 362.1 225 81.8
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 7.0e-98 361.3 298 67.1
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.0e-96 357.5 232 78.4
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.1e-93 345.9 256 71.5
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.2e-92 344.0 257 70.0
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 1.7e-91 340.1 225 77.3
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 3.5e-89 332.4 203 82.3
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.8e-85 320.1 221 71.0
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 8.9e-85 317.8 227 71.4
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 8.3e-83 311.2 229 70.3
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 5.4e-82 308.5 224 69.6
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 7.6e-76 288.1 202 69.8
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 7.8e-73 278.1 245 59.2
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-65 254.2 216 64.4
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 8.4e-59 231.5 137 81.0
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.6e-54 216.1 137 76.6
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 3.5e-49 199.5 228 44.3
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 1.0e-48 198.0 206 50.5
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 4.8e-38 162.5 220 39.1
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 5.0e-35 152.5 113 69.9
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 3.2e-34 149.8 89 84.3
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.0e-32 144.8 83 86.7
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 1.4e-24 117.9 64 85.9
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 4.8e-06 56.2 89 46.1


User provided reference genes

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