Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.5e-184 648.3 359 100.0
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.2e-118 430.6 355 71.5
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 4.0e-111 405.6 353 68.6
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 1.7e-109 400.2 370 66.8
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.4e-108 397.1 352 66.8
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.1e-108 395.6 352 66.5
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 9.1e-108 394.4 346 67.3
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.0e-106 391.0 352 66.2
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 2.9e-106 389.4 352 67.3
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.9e-105 386.7 357 65.5
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 7.2e-105 384.8 332 66.0
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 9.5e-105 384.4 324 70.4
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.2e-104 384.0 351 65.2
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.1e-104 383.3 353 65.4
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 6.1e-104 381.7 352 65.6
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.0e-103 379.4 353 65.4
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.2e-102 377.5 361 62.3
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.5e-102 377.1 353 64.9
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 3.4e-102 375.9 357 62.7
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 4.4e-102 375.6 288 74.0
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 6.3e-101 371.7 378 62.4
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-100 370.9 348 60.9
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.4e-100 370.5 351 63.2
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.4e-100 368.6 357 60.2
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 9.2e-100 367.9 344 62.5
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.2e-100 367.9 348 60.9
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.2e-99 367.5 352 62.2
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.6e-99 367.1 355 65.1
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.7e-99 366.3 354 63.8
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.5e-99 365.9 348 60.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 5.9e-99 365.2 344 61.9
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.0e-98 364.4 352 60.2
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.0e-98 364.4 363 62.8
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.0e-98 364.4 366 61.5
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.7e-98 363.6 343 62.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 2.3e-98 363.2 352 59.9
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.9e-98 362.5 346 61.3
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 5.0e-98 362.1 352 60.5
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 6.6e-98 361.7 343 62.1
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 6.6e-98 361.7 343 62.1
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-97 360.9 343 61.8
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.1e-97 360.9 354 62.4
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.2e-96 357.5 358 60.6
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.4e-95 354.0 393 57.5
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 3.1e-95 352.8 378 59.8
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 4.0e-95 352.4 354 60.2
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 5.2e-95 352.1 291 71.8
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.6e-94 349.7 345 61.2
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.8e-94 348.6 328 60.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 5.8e-94 348.6 371 58.8
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 7.5e-94 348.2 341 65.4
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.7e-93 347.1 344 62.5
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 8.3e-93 344.7 349 59.9
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 1.9e-92 343.6 355 62.8
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.4e-92 343.2 367 58.6
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 2.4e-92 343.2 320 63.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 3.2e-92 342.8 343 62.1
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 7.0e-92 341.7 331 65.3
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 9.2e-92 341.3 355 59.4
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.6e-91 340.5 347 57.6
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.0e-91 340.1 394 56.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 7.8e-91 338.2 349 60.5
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.3e-89 332.8 345 60.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 3.6e-88 329.3 362 56.6
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 8.0e-88 328.2 292 69.5
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.1e-87 327.8 349 59.9
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.4e-86 322.4 271 64.9
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.2e-85 320.1 353 57.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 4.9e-85 318.9 366 57.1
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 2.4e-84 316.6 384 53.1
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.6e-83 313.9 360 56.1
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.6e-83 313.9 345 59.4
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 3.5e-83 312.8 355 57.2
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 2.3e-82 310.1 363 57.3
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.3e-82 310.1 355 56.9
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 1.9e-81 307.0 344 53.8
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 3.3e-81 306.2 291 65.3
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 5.6e-81 305.4 395 52.7
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 9.9e-78 294.7 345 52.5
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 9.9e-78 294.7 347 51.9
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.7e-77 292.7 353 55.2
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 7.8e-75 285.0 356 52.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 2.3e-74 283.5 350 53.1
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.3e-73 279.6 355 53.0
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.8e-72 276.6 398 49.2
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.8e-72 276.6 353 51.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.8e-71 273.9 378 51.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 9.6e-65 251.5 320 54.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.3e-64 251.1 352 51.7
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.1e-63 248.1 368 47.8
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.4e-63 246.9 361 47.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 9.9e-62 241.5 257 61.9
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 8.7e-58 228.4 343 45.2
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 8.7e-58 228.4 276 56.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.1e-57 228.0 313 50.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.5e-54 217.6 346 48.6
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.4e-52 209.1 398 41.2
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 9.3e-52 208.4 254 57.1
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 1.2e-51 208.0 332 44.0
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 7.4e-49 198.7 276 46.7
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.4e-44 184.5 319 45.8
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.2e-44 183.3 224 48.2
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.1e-40 170.6 341 40.5
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.5e-38 164.5 115 77.4
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.4e-38 163.3 179 49.7
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.6e-38 162.2 172 59.9
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.6e-35 152.9 195 53.8
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.9e-21 107.1 70 81.4
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 3.8e-21 106.7 198 49.0
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 1.6e-19 101.3 298 35.9
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.6e-19 101.3 62 83.9
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 3.7e-16 90.1 295 32.5
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.1e-12 78.6 180 40.6
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.2e-12 77.0 180 40.0
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 3.2e-12 77.0 121 38.8
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 2.1e-11 74.3 88 53.4
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 5.2e-10 69.7 51 62.7
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.3e-08 62.8 68 55.9
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.0e-06 57.8 140 40.0
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 2.6e-06 57.4 35 71.4


User provided reference genes

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