Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0948 Ceratophyllum demersum HOM05D003607 ORTHO05D004049 6.1e-82 307.4 148 100.0
CDE06G0188 Ceratophyllum demersum HOM05D003607 ORTHO05D004049 1.8e-65 252.7 132 91.7
TAR633G2199 Trochodendron aralioides HOM05D003607 ORTHO05D004049 3.5e-53 211.8 134 76.1
TAR369G0187 Trochodendron aralioides HOM05D003607 ORTHO05D004049 2.2e-52 209.1 134 74.6
TAR623G0614 Trochodendron aralioides HOM05D003607 ORTHO05D004049 2.2e-52 209.1 134 76.1
CSS0022022 Camellia sinensis var. sinensis HOM05D003607 ORTHO05D004049 5.0e-52 208.0 134 73.9
Lj7A388T89 Lonicera japonica HOM05D003607 ORTHO05D004049 1.8e-49 199.5 135 71.9
CSS0005550 Camellia sinensis var. sinensis HOM05D003607 ORTHO05D004049 4.0e-49 198.4 137 72.3
CSS0036632 Camellia sinensis var. sinensis HOM05D003607 ORTHO05D004049 4.0e-49 198.4 137 72.3
Hma1.2p1_0802F.1_g220470 Hydrangea macrophylla HOM05D003607 ORTHO05D004049 2.0e-48 196.1 136 71.3
HPP92_012048 Vanilla planifolia HOM05D003607 ORTHO05D004049 4.4e-48 194.9 140 70.7
Actinidia31103 Actinidia chinensis HOM05D003607 ORTHO05D004049 1.7e-47 193.0 135 71.1
Actinidia34719 Actinidia chinensis HOM05D003607 ORTHO05D004049 4.8e-47 191.4 134 70.9
PGSC0003DMG400019486 Solanum tuberosum HOM05D003607 ORTHO05D004049 1.4e-46 189.9 136 69.9
Solyc11g007080.1 Solanum lycopersicum HOM05D003607 ORTHO05D004049 1.8e-46 189.5 136 69.9
Sopen11g003000 Solanum pennellii HOM05D003607 ORTHO05D004049 1.8e-46 189.5 136 69.9
PSO761G0544 Papaver somniferum HOM05D003607 ORTHO05D004049 3.1e-46 188.7 139 68.3
Nitab4.5_0001437g0160 Nicotiana tabacum HOM05D003607 ORTHO05D004049 4.1e-46 188.3 135 68.9
Nitab4.5_0012135g0010 Nicotiana tabacum HOM05D003607 ORTHO05D004049 4.1e-46 188.3 135 68.9
PSO675G0532 Papaver somniferum HOM05D003607 ORTHO05D004049 4.1e-46 188.3 141 70.2
CAN.G1513.4 Capsicum annuum HOM05D003607 ORTHO05D004049 5.4e-46 188.0 139 68.3
PSO210G3326 Papaver somniferum HOM05D003607 ORTHO05D004049 5.4e-46 188.0 139 68.3
Lsat_1_v5_gn_0_7620 Lactuca sativa HOM05D003607 ORTHO05D004049 7.0e-46 187.6 134 67.9
PSO384G4166 Papaver somniferum HOM05D003607 ORTHO05D004049 1.2e-45 186.8 132 71.2
Lsat_1_v5_gn_8_23940 Lactuca sativa HOM05D003607 ORTHO05D004049 2.0e-45 186.0 137 68.6
Aqoxy4G02802 Aquilegia oxysepala HOM05D003607 ORTHO05D004049 2.7e-45 185.7 147 66.0
Lj4C706T9 Lonicera japonica HOM05D003607 ORTHO05D004049 4.5e-45 184.9 139 67.6
PSO339G5446 Papaver somniferum HOM05D003607 ORTHO05D004049 4.5e-45 184.9 132 70.5
PSO541G0274 Papaver somniferum HOM05D003607 ORTHO05D004049 7.7e-45 184.1 140 67.9
Oeu025590.1 Olea europaea HOM05D003607 ORTHO05D004049 2.3e-44 182.6 139 66.9
Migut.F00909 Erythranthe guttata HOM05D003607 ORTHO05D004049 6.5e-44 181.0 141 67.4
HanXRQChr08g0217791 Helianthus annuus HOM05D003607 ORTHO05D004049 1.1e-43 180.3 135 68.1
Peaxi162Scf00173g00511 Petunia axillaris HOM05D003607 ORTHO05D004049 1.9e-43 179.5 136 64.7
Solyc05g055300.1 Solanum lycopersicum HOM05D003607 ORTHO05D004049 1.9e-43 179.5 140 63.6
Sopen05g033740 Solanum pennellii HOM05D003607 ORTHO05D004049 1.9e-43 179.5 140 63.6
PGSC0003DMG400023389 Solanum tuberosum HOM05D003607 ORTHO05D004049 2.5e-43 179.1 140 63.6
MSTRG.9085 Avicennia marina HOM05D003607 ORTHO05D004049 5.5e-43 177.9 140 65.7
Cc02_g09790 Coffea canephora HOM05D003607 ORTHO05D004049 1.2e-42 176.8 138 63.8
vmacro10304 Vaccinium macrocarpon HOM05D003607 ORTHO05D004049 1.6e-42 176.4 144 67.4
MBI01_g04060_MAGBIO Magnolia biondii HOM05D003607 ORTHO05D004049 3.6e-42 175.3 134 70.1
MSTRG.27534 Avicennia marina HOM05D003607 ORTHO05D004049 1.4e-41 173.3 140 64.3
TWI63G0764 Tripterygium wilfordii HOM05D003607 ORTHO05D004049 1.5e-40 169.9 135 62.2
Cpa.g.sc183.9 Carica papaya HOM05D003607 ORTHO05D004049 3.4e-40 168.7 134 64.2
Rhsim07G0211000 Rhododendron simsii HOM05D003607 ORTHO05D004049 3.4e-40 168.7 147 62.6
Oeu036840.1 Olea europaea HOM05D003607 ORTHO05D004049 2.8e-39 165.6 137 61.3
DCAR_013922 Daucus carota HOM05D003607 ORTHO05D004049 4.9e-39 164.9 137 62.8
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 6.3e-39 164.5 133 65.4
unitig_748.g8775 Utricularia gibba HOM05D003607 ORTHO05D004049 6.3e-39 164.5 137 64.2
Lalb_Chr01g0010411 Lupinus albus HOM05D003607 ORTHO05D004049 8.3e-39 164.1 133 63.9
Rhsim09G0142700 Rhododendron simsii HOM05D003607 ORTHO05D004049 8.3e-39 164.1 145 62.1
SGA_v2.0_scaffold13G06486 Striga asiatica HOM05D001901 ORTHO05D004049 8.3e-39 164.1 136 62.5
DCAR_032378 Daucus carota HOM05D003607 ORTHO05D004049 2.4e-38 162.5 137 62.0
SGA_v2.0_scaffold62G21343 Striga asiatica HOM05D003607 ORTHO05D004049 5.4e-38 161.4 137 63.5
DCAR_028954 Daucus carota HOM05D003607 ORTHO05D004049 2.7e-37 159.1 137 62.0
Manes.09G056401 Manihot esculenta HOM05D003607 ORTHO05D004049 3.5e-37 158.7 139 59.7
Potri.009G152600 Populus trichocarpa HOM05D003607 ORTHO05D004049 3.5e-37 158.7 139 58.3
SalBow6G2765 Salvia bowleyana HOM05D003607 ORTHO05D004049 3.5e-37 158.7 127 64.6
FAN02G1747 Fragaria x ananassa HOM05D003607 ORTHO05D004049 4.5e-37 158.3 143 59.4
CANSAT80G1935 Cannabis sativa HOM05D003607 ORTHO05D004049 5.9e-37 157.9 141 60.3
Ciclev10012570m.g Citrus clementina HOM05D003607 ORTHO05D004049 5.9e-37 157.9 136 58.1
Sabra09G0120500 Salix brachista HOM05D003607 ORTHO05D004049 1.3e-36 156.8 139 56.8
FAN14G5030 Fragaria x ananassa HOM05D003607 ORTHO05D004049 1.7e-36 156.4 143 59.4
Sabra04G0127600 Salix brachista HOM05D003607 ORTHO05D004049 1.7e-36 156.4 139 58.3
Dinv11849 Davidia involucrata HOM05D003607 ORTHO05D004049 2.3e-36 156.0 157 55.4
CiPaw.10G008300 Carya illinoinensis HOM05D003607 ORTHO05D004049 2.9e-36 155.6 141 60.3
RcHm_v2.0_Chr3g0472991 Rosa chinensis HOM05D003607 ORTHO05D004049 3.8e-36 155.2 142 59.2
TWI74G0563 Tripterygium wilfordii HOM05D003607 ORTHO05D004049 3.8e-36 155.2 139 60.4
Atru.chr8.1565 Acer truncatum HOM05D003607 ORTHO05D004049 5.0e-36 154.8 137 56.9
Cpa.g.sc5.37 Carica papaya HOM05D003607 ORTHO05D004049 6.6e-36 154.5 142 59.9
Cfa016592 Carpinus fangiana HOM05D003607 ORTHO05D004049 6.6e-36 154.5 143 60.8
FAN09G3360 Fragaria x ananassa HOM05D003607 ORTHO05D004049 6.6e-36 154.5 143 59.4
ClCG10G019070 Citrullus lanatus HOM05D003607 ORTHO05D004049 1.1e-35 153.7 136 58.1
FAN01G1204 Fragaria x ananassa HOM05D003607 ORTHO05D004049 1.1e-35 153.7 143 59.4
Sed0001726 Sechium edule HOM05D003607 ORTHO05D004049 1.1e-35 153.7 136 59.6
Haze_19593 Corylus avellana HOM05D003607 ORTHO05D004049 1.5e-35 153.3 143 60.1
FAN05G4077 Fragaria x ananassa HOM05D003607 ORTHO05D004049 1.5e-35 153.3 141 58.9
Sed0018362 Sechium edule HOM05D003607 ORTHO05D004049 1.5e-35 153.3 136 59.6
Potri.004G190800 Populus trichocarpa HOM05D003607 ORTHO05D004049 3.3e-35 152.1 139 58.3
RcHm_v2.0_Chr3g0491231 Rosa chinensis HOM05D003607 ORTHO05D004049 3.3e-35 152.1 141 57.4
THA.LOC104804679 Tarenaya hassleriana HOM05D003607 ORTHO05D004049 3.3e-35 152.1 142 57.0
Thhalv10017131m.g Eutrema salsugineum HOM05D003607 ORTHO05D004049 4.3e-35 151.8 141 56.0
FAN05G2511 Fragaria x ananassa HOM05D003607 ORTHO05D004049 4.3e-35 151.8 141 58.2
CiPaw.09G012700 Carya illinoinensis HOM05D003607 ORTHO05D004049 5.6e-35 151.4 141 59.6
QL07p039292 Quercus lobata HOM05D003607 ORTHO05D004049 5.6e-35 151.4 140 59.3
GSVIVG01033828001 Vitis vinifera HOM05D003607 ORTHO05D004049 5.6e-35 151.4 134 59.7
MELO3C009463.2 Cucumis melo HOM05D003607 ORTHO05D004049 9.5e-35 150.6 136 57.4
CsaV3_3G037170 Cucumis sativus L. HOM05D003607 ORTHO05D004049 9.5e-35 150.6 136 57.4
DCAR_013921 Daucus carota HOM05D003607 ORTHO05D004049 9.5e-35 150.6 125 63.2
FAN19G1909 Fragaria x ananassa HOM05D003607 ORTHO05D004049 9.5e-35 150.6 140 57.1
FAN23G0012 Fragaria x ananassa HOM05D003607 ORTHO05D004049 9.5e-35 150.6 140 57.1
FAN26G0628 Fragaria x ananassa HOM05D003607 ORTHO05D004049 9.5e-35 150.6 140 57.1
AL4G32410 Arabidopsis lyrata HOM05D003607 ORTHO05D004049 1.2e-34 150.2 141 55.3
AT2G36300 Arabidopsis thaliana HOM05D003607 ORTHO05D004049 1.2e-34 150.2 141 55.3
Ca_08996_v3 Cicer arietinum L. HOM05D003607 ORTHO05D004049 1.2e-34 150.2 138 60.9
Manes.08G024200 Manihot esculenta HOM05D003607 ORTHO05D004049 1.6e-34 149.8 140 57.1
VMungo1383G3486 Vigna mungo HOM05D003607 ORTHO05D004049 2.1e-34 149.4 137 60.6
Phvul.001G189100 Phaseolus vulgaris HOM05D003607 ORTHO05D004049 2.8e-34 149.1 137 60.6
Sp4g18520 Schrenkiella parvula HOM05D003607 ORTHO05D004049 4.7e-34 148.3 141 54.6
BcaB02g09364 Brassica carinata HOM05D003607 ORTHO05D004049 6.1e-34 147.9 143 55.2
Prupe.7G112800 Prunus persica HOM05D003607 ORTHO05D004049 6.1e-34 147.9 141 58.2
A05p09560 Brassica napus HOM05D003607 ORTHO05D004049 1.0e-33 147.1 142 53.5
C04p11820 Brassica napus HOM05D003607 ORTHO05D004049 1.0e-33 147.1 142 53.5
BolC4t22831H Brassica oleracea HOM05D003607 ORTHO05D004049 1.0e-33 147.1 142 53.5
BraA05t19909Z Brassica rapa HOM05D003607 ORTHO05D004049 1.0e-33 147.1 142 53.5
Glyma.03G194400 Glycine max HOM05D003607 ORTHO05D004049 1.0e-33 147.1 137 60.6
Glyma.19G194200 Glycine max HOM05D003607 ORTHO05D004049 1.0e-33 147.1 137 60.6
TWI53G1341 Tripterygium wilfordii HOM05D003607 ORTHO05D004049 1.0e-33 147.1 143 58.0
Zm00001eb397070 Zea mays HOM05D003607 ORTHO05D004049 1.0e-33 147.1 148 54.1
arahy.Tifrunner.gnm1.ann1.0UXM82 Arachis hypogaea HOM05D003607 ORTHO05D004049 1.4e-33 146.7 138 59.4
MD14G1020900 Malus domestica HOM05D003607 ORTHO05D004049 1.4e-33 146.7 141 58.2
THA.LOC104823483 Tarenaya hassleriana HOM05D003607 ORTHO05D004049 1.8e-33 146.4 143 55.2
arahy.Tifrunner.gnm1.ann1.66EI83 Arachis hypogaea HOM05D003607 ORTHO05D004049 2.3e-33 146.0 138 59.4
BcaC02g11742 Brassica carinata HOM05D003607 ORTHO05D004049 2.3e-33 146.0 143 53.1
Aa31LG5G21430 Aethionema arabicum HOM05D003607 ORTHO05D004049 3.0e-33 145.6 144 54.9
TPR.G19550 Trifolium pratense HOM05D003607 ORTHO05D004049 3.0e-33 145.6 138 59.4
Zm00001eb013300 Zea mays HOM05D003607 ORTHO05D004049 4.0e-33 145.2 148 54.1
CARHR130570 Cardamine hirsuta HOM05D003607 ORTHO05D004049 6.8e-33 144.4 141 53.9
Medtr7g104430 Medicago truncatula HOM05D003607 ORTHO05D004049 6.8e-33 144.4 137 59.9
Lj1g0001702 Lotus japonicus HOM05D003607 ORTHO05D004049 8.9e-33 144.1 135 59.3
Duzib106G1766 Durio zibethinus HOM05D000444 ORTHO05D004049 1.5e-32 143.3 141 56.7
Os03g0289200 Oryza sativa ssp. japonica HOM05D003607 ORTHO05D004049 1.5e-32 143.3 148 54.1
CARHR162640 Cardamine hirsuta HOM05D003607 ORTHO05D004049 2.0e-32 142.9 147 53.7
MD12G1023700 Malus domestica HOM05D003607 ORTHO05D004049 2.0e-32 142.9 147 55.1
Psat3g033800 Pisum sativum HOM05D003607 ORTHO05D004049 2.6e-32 142.5 138 59.4
Carub.0004s1805 Capsella rubella HOM05D003607 ORTHO05D004049 3.4e-32 142.1 141 52.5
Thhalv10010984m.g Eutrema salsugineum HOM05D003607 ORTHO05D004049 3.4e-32 142.1 142 52.8
Duzib093G0509 Durio zibethinus HOM05D003607 ORTHO05D004049 4.4e-32 141.7 142 54.9
HanXRQChr17g0570591 Helianthus annuus HOM05D003607 ORTHO05D004049 4.4e-32 141.7 115 64.3
Gohir.A01G207100 Gossypium hirsutum HOM05D003607 ORTHO05D004049 9.8e-32 140.6 139 56.8
Sp5g09570 Schrenkiella parvula HOM05D003607 ORTHO05D004049 2.2e-31 139.4 146 54.1
Gohir.D01G196500 Gossypium hirsutum HOM05D003607 ORTHO05D004049 2.9e-31 139.0 139 56.1
Gorai.002G240700 Gossypium raimondii HOM05D003607 ORTHO05D004049 3.7e-31 138.7 139 56.1
Duzib128G1249 Durio zibethinus HOM05D003607 ORTHO05D004049 4.9e-31 138.3 142 54.2
Dinv09603 Davidia involucrata HOM05D003607 ORTHO05D004049 6.4e-31 137.9 89 70.8
Migut.F01614 Erythranthe guttata HOM05D003607 ORTHO05D004049 6.4e-31 137.9 114 64.0
Lalb_Chr01g0018221 Lupinus albus HOM05D003607 ORTHO05D004049 8.3e-31 137.5 134 58.2
CiPaw.13G038900 Carya illinoinensis HOM05D003607 ORTHO05D004049 1.4e-30 136.7 136 54.4
Thecc.05G087200 Theobroma cacao HOM05D003607 ORTHO05D004049 1.4e-30 136.7 140 55.0
Lalb_Chr25g0288381 Lupinus albus HOM05D003607 ORTHO05D004049 1.9e-30 136.3 133 59.4
Psat5g022640 Pisum sativum HOM05D003607 ORTHO05D004049 3.2e-30 135.6 131 58.0
COL.COLO4_29767 Corchorus olitorius HOM05D003607 ORTHO05D004049 4.1e-30 135.2 141 54.6
Gohir.A01G138500 Gossypium hirsutum HOM05D003607 ORTHO05D004049 1.2e-29 133.7 141 53.9
Gohir.D01G128200 Gossypium hirsutum HOM05D003607 ORTHO05D004049 2.0e-29 132.9 141 53.2
Gorai.002G158800 Gossypium raimondii HOM05D003607 ORTHO05D004049 2.0e-29 132.9 141 53.2
AL5G33530 Arabidopsis lyrata HOM05D003607 ORTHO05D004049 3.5e-29 132.1 144 49.3
BcaC02g07616 Brassica carinata HOM05D003607 ORTHO05D004049 1.0e-28 130.6 134 53.0
BolC4t28008H Brassica oleracea HOM05D003607 ORTHO05D004049 1.0e-28 130.6 134 53.0
SEGI_31078 Sequoiadendron giganteum HOM05D003607 ORTHO05D004049 1.3e-28 130.2 133 56.4
AT3G52760 Arabidopsis thaliana HOM05D003607 ORTHO05D004049 1.7e-28 129.8 143 48.3
EL10Ac6g14511 Beta vulgaris HOM05D003607 ORTHO05D004049 1.7e-28 129.8 151 51.0
PGR004G0926 Punica granatum HOM05D003607 ORTHO05D004049 1.7e-28 129.8 137 50.4
Carub.0005s1924 Capsella rubella HOM05D003607 ORTHO05D004049 2.3e-28 129.4 142 50.7
Sc02g0000900 Simmondsia chinensis HOM05D003607 ORTHO05D004049 3.9e-28 128.6 156 51.3
BcaB06g28927 Brassica carinata HOM05D003607 ORTHO05D004049 2.5e-27 125.9 132 50.0
CSS0022860 Camellia sinensis var. sinensis HOM05D003607 ORTHO05D004049 1.2e-26 123.6 137 51.8
Nitab4.5_0001027g0170 Nicotiana tabacum HOM05D003607 ORTHO05D004049 3.6e-26 122.1 91 60.4
EL10Ac3g06213 Beta vulgaris HOM05D003607 ORTHO05D004049 1.1e-25 120.6 150 47.3
Nitab4.5_0002662g0040 Nicotiana tabacum HOM05D003607 ORTHO05D004049 2.3e-25 119.4 91 60.4
AUR62044160 Chenopodium quinoa HOM05D003607 ORTHO05D004049 3.1e-25 119.0 112 58.9
ATR0605G137 Amborella trichopoda HOM05D003607 ORTHO05D004049 2.6e-24 115.9 144 48.6
Oeu036839.1 Olea europaea HOM05D003607 ORTHO05D004049 2.6e-24 115.9 90 61.1
CDE11G0953 Ceratophyllum demersum HOM05D003607 ORTHO05D004049 3.4e-24 115.5 132 46.2
FAN04G1633 Fragaria x ananassa HOM05D003607 ORTHO05D004049 1.7e-23 113.2 110 58.2
Mapoly0150s0018 Marchantia polymorpha HOM05D003607 ORTHO05D004049 1.1e-22 110.5 96 60.4
Pp3c18_15780 Physcomitrium patens HOM05D003607 ORTHO05D004049 3.2e-22 109.0 93 59.1
Pp3c18_15783 Physcomitrium patens HOM05D003607 ORTHO05D004049 3.2e-22 109.0 93 59.1
Lj3P931T18 Lonicera japonica HOM05D003607 ORTHO05D004049 5.4e-22 108.2 79 63.3
Pp3c11_15860 Physcomitrium patens HOM05D003607 ORTHO05D004049 2.7e-21 105.9 116 51.7
AagrBONN_evm.TU.Sc2ySwM_228.2374 Anthoceros agrestis HOM05D003607 ORTHO05D004049 6.6e-20 101.3 93 53.8
SMO351G0616 Selaginella moellendorffii HOM05D003607 ORTHO05D004049 2.5e-19 99.4 93 59.1
Eucgr.A01507 Eucalyptus grandis HOM05D003607 ORTHO05D004049 3.3e-19 99.0 95 53.7
SalBow2G0328 Salvia bowleyana HOM05D003607 ORTHO05D004049 3.3e-19 99.0 96 54.2
FAN14G1813 Fragaria x ananassa HOM05D003607 ORTHO05D004049 1.4e-17 93.6 94 47.9
Pp3c21_5540 Physcomitrium patens HOM05D003607 ORTHO05D004049 1.3e-15 87.0 69 58.0
FvH4_6g27040 Fragaria vesca HOM05D003607 ORTHO05D004049 2.4e-14 82.8 94 46.8
CBR_g2958 Chara braunii HOM05D003607 ORTHO05D004049 3.2e-14 82.4 137 44.5
DCAR_032379 Daucus carota HOM05D003607 ORTHO05D004049 2.1e-10 69.7 41 73.2
PRCOL_00002835 Prasinoderma coloniale HOM05D003607 ORTHO05D004049 4.7e-10 68.6 70 48.6
Cfa026672 Carpinus fangiana HOM05D003607 ORTHO05D004049 6.2e-10 68.2 96 38.5
CBR_g10857 Chara braunii HOM05D003607 ORTHO05D004049 2.0e-08 63.2 61 55.7
MCO11G705 Micromonas commoda HOM05D003607 ORTHO05D004049 3.8e-07 58.9 59 52.5
Phvul.004G098394 Phaseolus vulgaris HOM05D003607 ORTHO05D004049 4.2e-06 55.5 52 57.7


User provided reference genes

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