Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 2.7e-117 425.2 201 100.0
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 4.9e-58 228.4 147 66.0
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 5.4e-57 224.9 147 65.3
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 2.3e-55 219.5 147 63.3
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 8.6e-55 217.6 147 61.2
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 2.5e-54 216.1 147 59.2
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 4.3e-54 215.3 147 62.6
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 4.3e-54 215.3 147 59.9
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 5.6e-54 214.9 151 61.6
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 9.5e-54 214.2 147 59.9
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-53 213.8 147 60.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-53 213.8 147 60.5
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.6e-53 213.4 147 58.5
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 2.1e-53 213.0 147 59.2
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 2.8e-53 212.6 157 58.0
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 8.0e-53 211.1 147 59.9
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 8.0e-53 211.1 147 60.5
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.0e-52 210.7 147 58.5
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.0e-52 210.7 147 60.5
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.4e-52 210.3 147 59.9
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 1.4e-52 210.3 147 61.2
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 2.3e-52 209.5 147 58.5
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.3e-52 209.5 147 59.9
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 3.1e-52 209.1 147 61.2
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.1e-52 209.1 151 58.9
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 4.0e-52 208.8 147 59.2
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 6.8e-52 208.0 147 57.1
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.2e-51 207.2 147 59.2
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.2e-51 207.2 147 59.9
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.2e-51 207.2 147 58.5
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.5e-51 206.8 147 63.3
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 2.0e-51 206.5 147 61.9
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 2.0e-51 206.5 146 58.9
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 2.6e-51 206.1 147 63.3
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.4e-51 205.7 147 59.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 3.4e-51 205.7 147 59.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 4.4e-51 205.3 148 59.5
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 5.8e-51 204.9 158 54.4
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 7.5e-51 204.5 147 56.5
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 7.5e-51 204.5 147 57.8
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 7.5e-51 204.5 148 62.2
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 9.8e-51 204.1 148 55.4
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 9.8e-51 204.1 147 59.9
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 9.8e-51 204.1 148 58.1
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.3e-50 203.8 147 60.5
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.3e-50 203.8 158 54.4
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.2e-50 203.0 157 56.1
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.9e-50 202.6 147 56.5
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 2.9e-50 202.6 147 59.2
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 2.9e-50 202.6 158 53.8
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 2.9e-50 202.6 147 58.5
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 3.7e-50 202.2 158 53.2
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 4.9e-50 201.8 147 57.8
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 4.9e-50 201.8 148 54.7
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 6.4e-50 201.4 147 58.5
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 6.4e-50 201.4 147 55.8
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 6.4e-50 201.4 147 59.2
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 8.3e-50 201.1 147 56.5
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 8.3e-50 201.1 148 56.1
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 8.3e-50 201.1 148 58.1
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.1e-49 200.7 147 58.5
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.1e-49 200.7 147 55.1
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.1e-49 200.7 147 57.1
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.1e-49 200.7 147 55.8
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.4e-49 200.3 148 56.1
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 1.9e-49 199.9 147 55.8
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 2.4e-49 199.5 152 57.2
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 2.4e-49 199.5 147 55.1
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 2.4e-49 199.5 148 55.4
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.4e-49 199.5 144 58.3
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.2e-49 199.1 147 59.9
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.4e-49 198.4 144 57.6
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 7.0e-49 198.0 144 58.3
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 9.2e-49 197.6 147 55.8
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 1.2e-48 197.2 147 54.4
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.2e-48 197.2 147 55.1
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.2e-48 197.2 146 56.2
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 1.6e-48 196.8 147 53.7
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 7.8e-48 194.5 147 57.8
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 7.8e-48 194.5 148 55.4
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 3.0e-47 192.6 147 53.1
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.0e-47 192.6 147 54.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 2.5e-46 189.5 146 54.1
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 9.5e-46 187.6 147 53.1
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 1.6e-45 186.8 147 53.1
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.6e-45 185.7 147 52.4
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.1e-44 184.1 147 52.4
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.4e-44 183.7 147 52.4
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.6e-43 179.5 147 51.7
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.4e-43 179.1 147 51.0
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 5.8e-43 178.3 146 56.2
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 9.8e-43 177.6 147 51.7
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 4.9e-42 175.3 148 50.7
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 6.4e-42 174.9 147 52.4
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 6.4e-42 174.9 147 51.0
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.2e-40 170.6 126 54.8
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.2e-40 170.6 147 51.7
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.2e-40 170.6 131 54.2
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.6e-40 170.2 148 48.0
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.1e-40 169.9 147 49.7
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.7e-39 166.8 148 50.7
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.9e-39 165.6 162 48.1
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 3.9e-39 165.6 127 53.5
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.6e-39 164.5 147 52.4
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 4.0e-36 155.6 148 50.0
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 6.8e-36 154.8 108 56.5
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 6.4e-34 148.3 147 42.9
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.5e-30 137.1 147 44.2
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 2.8e-29 132.9 139 42.4
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 6.2e-21 105.1 148 34.5
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.0e-15 87.8 73 49.3
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 3.9e-15 85.9 211 27.0
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.9e-06 57.0 35 68.6


User provided reference genes

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