Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 6.2e-219 763.8 385 100.0
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.9e-200 701.8 385 91.9
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 5.0e-104 382.1 380 50.5
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.8e-101 373.6 379 51.5
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 8.9e-101 371.3 381 50.1
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.0e-100 370.2 381 49.9
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 3.7e-99 365.9 383 49.3
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.1e-98 364.4 381 51.2
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.9e-98 363.6 381 48.0
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 2.7e-97 359.8 374 49.2
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 3.5e-97 359.4 380 49.7
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 4.6e-97 359.0 381 47.8
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 6.0e-97 358.6 381 47.5
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.0e-96 357.8 379 48.5
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.7e-96 357.1 381 47.5
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 5.0e-96 355.5 381 48.0
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 2.5e-95 353.2 381 47.5
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 5.6e-95 352.1 381 47.2
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.6e-94 350.5 366 50.5
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.6e-94 350.5 382 48.7
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.6e-94 350.5 355 50.4
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 2.1e-94 350.1 381 48.0
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 3.6e-94 349.4 383 48.0
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.7e-94 349.0 355 51.8
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 8.1e-94 348.2 370 49.5
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 8.1e-94 348.2 370 48.4
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 9.9e-92 341.3 366 48.1
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 2.9e-91 339.7 381 46.5
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 4.9e-91 339.0 382 48.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 8.3e-91 338.2 382 45.5
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.4e-90 337.4 382 47.9
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 3.2e-90 336.3 367 49.9
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.2e-89 334.3 382 46.6
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.5e-89 332.8 359 48.5
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 4.6e-89 332.4 382 44.5
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 4.6e-89 332.4 381 46.7
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.3e-87 326.2 380 45.8
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 5.6e-87 325.5 380 44.5
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 7.3e-87 325.1 381 44.1
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.6e-86 322.8 373 46.9
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 3.6e-86 322.8 387 45.0
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.4e-85 320.9 380 44.2
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.8e-85 320.5 380 43.4
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 2.4e-85 320.1 381 44.4
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 5.2e-85 318.9 382 45.3
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 6.8e-85 318.5 382 42.7
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.2e-84 317.8 383 43.1
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 2.6e-84 316.6 382 42.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 4.4e-84 315.8 381 45.1
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 5.8e-84 315.5 381 43.3
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 7.6e-84 315.1 379 44.3
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 8.4e-83 311.6 379 42.7
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.1e-82 311.2 340 47.4
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 6.0e-81 305.4 383 44.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 1.7e-80 303.9 318 49.1
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 3.9e-80 302.8 379 43.5
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.5e-79 300.1 369 43.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 5.6e-79 298.9 382 40.6
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 9.6e-79 298.1 381 42.0
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 1.4e-77 294.3 405 40.0
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.7e-75 287.3 358 42.7
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.4e-74 284.3 270 54.8
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 9.3e-74 281.6 382 41.1
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 2.1e-73 280.4 353 43.6
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 3.5e-73 279.6 364 40.9
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 4.6e-73 279.3 381 42.3
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.0e-72 278.1 381 42.5
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 1.9e-71 273.9 382 40.1
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 9.6e-71 271.6 265 53.6
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.2e-68 264.6 386 42.2
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 2.6e-68 263.5 381 39.4
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 5.8e-68 262.3 306 46.7
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.9e-67 260.0 264 53.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.5e-63 247.7 477 34.4
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 1.5e-63 247.7 264 49.6
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 5.6e-63 245.7 369 40.7
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 9.6e-63 245.0 374 37.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.3e-62 244.6 382 35.9
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 5.3e-61 239.2 371 38.0
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 6.9e-61 238.8 375 34.9
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 5.8e-60 235.7 375 34.4
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 5.8e-60 235.7 372 36.3
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.7e-59 234.2 377 34.7
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 3.2e-58 229.9 371 34.8
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 4.2e-58 229.6 372 35.5
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 5.5e-58 229.2 373 34.9
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 3.9e-56 223.0 195 58.5
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 8.7e-56 221.9 369 36.6
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 4.3e-55 219.5 257 45.1
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.1e-49 200.7 398 33.2
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 1.5e-44 184.5 379 31.9
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.9e-42 177.6 378 33.6
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 2.3e-40 170.6 274 36.1
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 2.3e-40 170.6 274 36.1
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 1.7e-38 164.5 251 37.1
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.5e-31 141.4 142 52.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 5.3e-29 132.9 207 38.2
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 9.4e-26 122.1 282 31.2
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 6.1e-25 119.4 167 40.1
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 1.8e-24 117.9 325 30.5
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.8e-24 117.9 134 43.3
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 5.2e-24 116.3 325 29.5
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 2.0e-23 114.4 434 26.5
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 3.7e-22 110.2 116 42.2
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.3e-19 101.7 114 51.8
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.2e-19 100.9 146 41.1
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.5e-18 98.2 151 43.7
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 5.5e-18 96.3 124 33.9
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.5e-10 71.6 95 40.0
PRCOL_00001562 Prasinoderma coloniale HOM05D003851 ORTHO05D005657 4.4e-07 60.1 246 23.2


User provided reference genes

Program Settings