Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0860 Ceratophyllum demersum HOM05D000350 ORTHO05D000228 1.1e-215 753.1 394 100.0
CDE06G0139 Ceratophyllum demersum HOM05D000350 ORTHO05D000228 3.5e-209 731.5 394 95.9
TAR381G1380 Trochodendron aralioides HOM05D000350 ORTHO05D000228 7.5e-71 271.9 349 51.3
Nn5g27611 Nelumbo nucifera HOM05D000350 ORTHO05D000228 2.1e-60 237.3 458 42.1
CSS0019031 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.2e-55 221.5 405 43.0
MBI17_g09748_MAGBIO Magnolia biondii HOM05D000350 ORTHO05D000228 8.3e-54 215.3 465 40.6
Hma1.2p1_1108F.1_g257880 Hydrangea macrophylla HOM05D000350 ORTHO05D000228 1.4e-53 214.5 444 39.6
PGSC0003DMG400024928 Solanum tuberosum HOM05D000350 ORTHO05D000228 7.1e-53 212.2 384 44.0
Gorai.002G215000 Gossypium raimondii HOM05D000350 ORTHO05D000228 3.5e-52 209.9 395 42.3
Gohir.A01G182200 Gossypium hirsutum HOM05D000350 ORTHO05D000228 7.8e-52 208.8 395 42.0
Dinv19395 Davidia involucrata HOM05D000350 ORTHO05D000228 1.0e-51 208.4 389 40.6
Thecc.02G025500 Theobroma cacao HOM05D000350 ORTHO05D000228 1.3e-51 208.0 399 42.4
Gohir.D01G173300 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.7e-51 207.6 395 42.0
Duzib248G0668 Durio zibethinus HOM05D000350 ORTHO05D000228 3.9e-51 206.5 409 42.1
Dinv01846 Davidia involucrata HOM05D000350 ORTHO05D000228 1.1e-50 204.9 418 39.5
CiPaw.06G143600 Carya illinoinensis HOM05D000350 ORTHO05D000228 3.3e-50 203.4 456 38.8
CSS0012847 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.6e-49 201.1 395 40.0
Gohir.A04G130000 Gossypium hirsutum HOM05D000350 ORTHO05D000228 3.6e-49 199.9 434 39.2
Sopen01g046180 Solanum pennellii HOM05D000350 ORTHO05D000228 4.7e-49 199.5 406 41.4
Gohir.D04G175200 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.4e-48 198.0 435 40.9
COL.COLO4_17758 Corchorus olitorius HOM05D000350 ORTHO05D000228 1.8e-48 197.6 424 38.7
Cpa.g.sc30.48 Carica papaya HOM05D000350 ORTHO05D000228 2.4e-48 197.2 407 38.3
Duzib132G0811 Durio zibethinus HOM05D000350 ORTHO05D000228 3.1e-48 196.8 408 41.7
Gorai.012G166500 Gossypium raimondii HOM05D000350 ORTHO05D000228 4.0e-48 196.4 435 40.2
QL02p099882 Quercus lobata HOM05D000350 ORTHO05D000228 4.0e-48 196.4 424 39.6
Nitab4.5_0007913g0020 Nicotiana tabacum HOM05D000350 ORTHO05D000228 8.9e-48 195.3 351 44.4
DCAR_006683 Daucus carota HOM05D000350 ORTHO05D000228 4.4e-47 193.0 413 40.0
TWI14G0578 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 9.9e-47 191.8 374 41.7
Cfa005483 Carpinus fangiana HOM05D000350 ORTHO05D000228 1.1e-45 188.3 336 41.7
Prupe.1G576500 Prunus persica HOM05D000350 ORTHO05D000228 3.2e-45 186.8 428 38.8
CiPaw.05G051300 Carya illinoinensis HOM05D000350 ORTHO05D000228 7.1e-45 185.7 408 39.2
Cc02_g22960 Coffea canephora HOM05D000350 ORTHO05D000228 7.1e-45 185.7 414 38.4
Lsat_1_v5_gn_5_103680 Lactuca sativa HOM05D000350 ORTHO05D000228 2.7e-44 183.7 417 37.2
Oeu036680.2 Olea europaea HOM05D000350 ORTHO05D000228 2.7e-44 183.7 384 39.1
Actinidia39014 Actinidia chinensis HOM05D000350 ORTHO05D000228 4.6e-44 183.0 467 36.4
MD08G1240000 Malus domestica HOM05D000350 ORTHO05D000228 4.6e-44 183.0 470 37.2
Nitab4.5_0000948g0150 Nicotiana tabacum HOM05D000350 ORTHO05D000228 7.8e-44 182.2 403 38.2
CAN.G798.44 Capsicum annuum HOM05D000350 ORTHO05D000228 1.0e-43 181.8 391 39.4
ATR0584G103 Amborella trichopoda HOM05D000350 ORTHO05D000228 1.7e-43 181.0 429 38.2
MD15G1431700 Malus domestica HOM05D000350 ORTHO05D000228 5.1e-43 179.5 429 36.8
Oeu000125.1 Olea europaea HOM05D000350 ORTHO05D000228 6.6e-43 179.1 424 37.7
Manes.10G120400 Manihot esculenta HOM05D000350 ORTHO05D000228 1.9e-42 177.6 434 38.7
HanXRQChr10g0294511 Helianthus annuus HOM05D000350 ORTHO05D000228 3.3e-42 176.8 391 37.9
TWI23G1234 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 4.3e-42 176.4 369 40.7
Rhsim11G0125700 Rhododendron simsii HOM05D000350 ORTHO05D000228 8.1e-41 172.2 416 37.7
TWI59G0579 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.1e-40 171.8 318 41.5
Sed0024468 Sechium edule HOM05D000350 ORTHO05D000228 2.0e-39 167.5 365 39.7
Sabra01G0168200 Salix brachista HOM05D000350 ORTHO05D000228 4.4e-39 166.4 369 39.3
Phvul.006G217800 Phaseolus vulgaris HOM05D000350 ORTHO05D000228 5.8e-39 166.0 379 36.4
MSTRG.5217 Avicennia marina HOM05D000350 ORTHO05D000228 9.9e-39 165.2 408 39.0
Haze_01821 Corylus avellana HOM05D000350 ORTHO05D000228 1.3e-38 164.9 236 45.8
TAR624G0184 Trochodendron aralioides HOM05D000350 ORTHO05D000228 1.7e-38 164.5 176 56.8
Glyma.16G004300 Glycine max HOM05D000350 ORTHO05D000228 2.9e-38 163.7 373 39.1
Actinidia00187 Actinidia chinensis HOM05D000350 ORTHO05D000228 4.9e-38 162.9 393 35.9
Lj5P261T19 Lonicera japonica HOM05D000350 ORTHO05D000228 6.4e-38 162.5 254 45.7
Potri.004G222100 Populus trichocarpa HOM05D000350 ORTHO05D000228 6.4e-38 162.5 459 36.2
HPP92_027800 Vanilla planifolia HOM05D000350 ORTHO05D000228 6.4e-38 162.5 369 36.6
MBI17_g44301_MAGBIO Magnolia biondii HOM05D000350 ORTHO05D000228 1.2e-36 158.3 454 35.5
VMungo0540G0398 Vigna mungo HOM05D000350 ORTHO05D000228 1.6e-36 157.9 409 34.7
arahy.Tifrunner.gnm1.ann1.22FU97 Arachis hypogaea HOM05D000350 ORTHO05D000228 3.5e-36 156.8 403 36.5
arahy.Tifrunner.gnm1.ann1.ABQ1RQ Arachis hypogaea HOM05D000350 ORTHO05D000228 1.3e-33 148.3 405 34.8
ECA234G4001 Erigeron canadensis HOM05D000350 ORTHO05D000228 1.3e-33 148.3 418 33.5
ClCG11G013380 Citrullus lanatus HOM05D000350 ORTHO05D000228 3.1e-32 143.7 398 35.4
Lj6g0006864 Lotus japonicus HOM05D000350 ORTHO05D000228 9.0e-32 142.1 386 36.3
MSTRG.16500 Avicennia marina HOM05D000350 ORTHO05D000228 2.0e-31 141.0 401 35.2
MSTRG.16501 Avicennia marina HOM05D000350 ORTHO05D000228 2.0e-31 141.0 401 35.2
Manes.07G022400 Manihot esculenta HOM05D000350 ORTHO05D000228 1.3e-30 138.3 417 34.5
Glyma.12G168300 Glycine max HOM05D000350 ORTHO05D000228 1.7e-30 137.9 381 36.0
Gohir.A05G273600 Gossypium hirsutum HOM05D000350 ORTHO05D000228 4.2e-29 133.3 408 34.1
Gorai.009G289000 Gossypium raimondii HOM05D000350 ORTHO05D000228 4.2e-29 133.3 406 33.5
Gohir.D05G276000 Gossypium hirsutum HOM05D000350 ORTHO05D000228 1.2e-28 131.7 406 33.5
HPP92_004434 Vanilla planifolia HOM05D000350 ORTHO05D000228 1.2e-28 131.7 186 43.0
Duzib116G0923 Durio zibethinus HOM05D000350 ORTHO05D000228 4.6e-28 129.8 418 32.8
Lalb_Chr20g0123661 Lupinus albus HOM05D000350 ORTHO05D000228 4.6e-28 129.8 372 34.1
SEGI_38392 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 7.9e-28 129.0 482 31.3
Migut.B00803 Erythranthe guttata HOM05D000350 ORTHO05D000228 1.0e-27 128.6 388 33.0
Medtr2g006150 Medicago truncatula HOM05D000350 ORTHO05D000228 3.0e-27 127.1 431 33.6
Thecc.08G186000 Theobroma cacao HOM05D000350 ORTHO05D000228 3.0e-27 127.1 389 34.4
CsaV3_5G029900 Cucumis sativus L. HOM05D000350 ORTHO05D000228 3.9e-27 126.7 405 33.6
Ca_00051_v3 Cicer arietinum L. HOM05D000350 ORTHO05D000228 5.6e-26 122.9 380 34.2
MELO3C011835.2 Cucumis melo HOM05D000350 ORTHO05D000228 5.6e-26 122.9 411 33.6
Atru.chr6.722 Acer truncatum HOM05D000350 ORTHO05D000228 7.4e-26 122.5 422 30.8
Atru.chr6.728 Acer truncatum HOM05D000350 ORTHO05D000228 7.4e-26 122.5 422 30.8
Sabra19G0093400 Salix brachista HOM05D000350 ORTHO05D000228 7.4e-26 122.5 412 33.0
Duzib177G0411 Durio zibethinus HOM05D000350 ORTHO05D000228 2.1e-25 120.9 424 32.1
CANSAT54G2211 Cannabis sativa HOM05D000350 ORTHO05D000228 4.8e-25 119.8 425 34.6
TAR624G0893 Trochodendron aralioides HOM05D000350 ORTHO05D000228 1.1e-24 118.6 239 41.4
Cpa.g.sc66.26 Carica papaya HOM05D000350 ORTHO05D000228 3.1e-24 117.1 353 31.2
Potri.019G081800 Populus trichocarpa HOM05D000350 ORTHO05D000228 6.9e-24 115.9 454 31.5
Solyc01g103780.4 Solanum lycopersicum HOM05D000350 ORTHO05D000228 6.9e-24 115.9 317 36.9
Psat1g221880 Pisum sativum HOM05D000350 ORTHO05D000228 1.2e-23 115.2 423 32.6
Potri.013G110700 Populus trichocarpa HOM05D000350 ORTHO05D000228 5.8e-23 112.8 451 30.8
Peaxi162Scf00011g00819 Petunia axillaris HOM05D000350 ORTHO05D000228 1.7e-22 111.3 332 35.5
Sabra13G0094600 Salix brachista HOM05D000350 ORTHO05D000228 3.8e-22 110.2 451 30.8
SGA_v2.0_scaffold338G49243 Striga asiatica HOM05D000350 ORTHO05D000228 6.4e-22 109.4 403 30.5
Manes.18G103100 Manihot esculenta HOM05D000350 ORTHO05D000228 1.2e-20 105.1 435 32.2
unitig_578.g16347 Utricularia gibba HOM05D000350 ORTHO05D000228 6.0e-20 102.8 318 34.6
MSTRG.25458 Avicennia marina HOM05D000350 ORTHO05D000228 3.9e-19 100.1 380 30.0
GSVIVG01023283001 Vitis vinifera HOM05D000350 ORTHO05D000228 1.5e-18 98.2 345 31.0
PGR042G1746 Punica granatum HOM05D000350 ORTHO05D000228 1.9e-18 97.8 395 29.1
Aqoxy6G00142 Aquilegia oxysepala HOM05D000350 ORTHO05D000228 2.5e-18 97.4 269 35.7
Ciclev10000702m.g Citrus clementina HOM05D000350 ORTHO05D000228 2.5e-18 97.4 381 31.8
CARHR053950 Cardamine hirsuta HOM05D000350 ORTHO05D000228 9.6e-18 95.5 357 32.5
Migut.C01285 Erythranthe guttata HOM05D000350 ORTHO05D000228 2.8e-17 94.0 332 29.5
Nitab4.5_0000365g0240 Nicotiana tabacum HOM05D000350 ORTHO05D000228 3.7e-17 93.6 378 29.6
Oeu049819.1 Olea europaea HOM05D000350 ORTHO05D000228 6.2e-17 92.8 241 34.4
Pp3c10_14310 Physcomitrium patens HOM05D000350 ORTHO05D000228 6.2e-17 92.8 411 31.6
AT1G58100 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 1.1e-16 92.0 354 29.9
Cc00_g06580 Coffea canephora HOM05D000350 ORTHO05D000228 3.1e-16 90.5 386 29.8
HPP92_016135 Vanilla planifolia HOM05D000350 ORTHO05D000228 3.1e-16 90.5 303 32.7
Dinv15058 Davidia involucrata HOM05D000350 ORTHO05D000228 4.0e-16 90.1 197 34.0
Eucgr.F02587 Eucalyptus grandis HOM05D000350 ORTHO05D000228 4.0e-16 90.1 431 27.6
Oeu039152.1 Olea europaea HOM05D000350 ORTHO05D000228 9.0e-16 89.0 444 26.6
Nitab4.5_0001082g0060 Nicotiana tabacum HOM05D000350 ORTHO05D000228 1.5e-15 88.2 288 30.9
Aa31LG4G8600 Aethionema arabicum HOM05D000350 ORTHO05D000228 2.0e-15 87.8 367 30.2
Oeu045941.1 Olea europaea HOM05D000350 ORTHO05D000228 2.0e-15 87.8 326 33.4
CARHR064820 Cardamine hirsuta HOM05D000350 ORTHO05D000228 2.6e-15 87.4 374 29.9
DCAR_025352 Daucus carota HOM05D000350 ORTHO05D000228 2.6e-15 87.4 407 28.5
Oeu021221.1 Olea europaea HOM05D000350 ORTHO05D000228 2.6e-15 87.4 452 28.1
SGA_v2.0_scaffold24G10586 Striga asiatica HOM05D000350 ORTHO05D000228 2.6e-15 87.4 332 30.4
AT1G72010 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 1.0e-14 85.5 416 29.3
Nitab4.5_0009198g0010 Nicotiana tabacum HOM05D000350 ORTHO05D000228 1.3e-14 85.1 421 28.7
PGSC0003DMG400009276 Solanum tuberosum HOM05D000350 ORTHO05D000228 1.7e-14 84.7 400 29.8
Solyc06g065190.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 2.2e-14 84.3 335 27.8
Sopen06g023690 Solanum pennellii HOM05D000350 ORTHO05D000228 2.2e-14 84.3 330 27.6
Nitab4.5_0000303g0270 Nicotiana tabacum HOM05D000350 ORTHO05D000228 3.8e-14 83.6 381 28.9
PGSC0003DMG400026105 Solanum tuberosum HOM05D000350 ORTHO05D000228 3.8e-14 83.6 335 27.8
THA.LOC104823695 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 4.9e-14 83.2 395 28.1
AL2G31640 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 1.1e-13 82.0 407 29.0
Carub.0002s0652 Capsella rubella HOM05D000350 ORTHO05D000228 1.4e-13 81.6 388 29.6
Manes.02G194200 Manihot esculenta HOM05D000350 ORTHO05D000228 1.4e-13 81.6 379 29.6
BolC9t55236H Brassica oleracea HOM05D000350 ORTHO05D000228 1.9e-13 81.3 381 30.2
SEGI_17926 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 1.9e-13 81.3 461 28.6
Solyc11g020670.1 Solanum lycopersicum HOM05D000350 ORTHO05D000228 1.9e-13 81.3 388 30.4
BcaC04g22116 Brassica carinata HOM05D000350 ORTHO05D000228 2.5e-13 80.9 381 30.2
C09p23170 Brassica napus HOM05D000350 ORTHO05D000228 2.5e-13 80.9 381 30.2
Peaxi162Scf00391g00048 Petunia axillaris HOM05D000350 ORTHO05D000228 2.5e-13 80.9 417 28.8
A09p18560 Brassica napus HOM05D000350 ORTHO05D000228 7.1e-13 79.3 380 29.5
Mapoly0068s0102 Marchantia polymorpha HOM05D000350 ORTHO05D000228 1.2e-12 78.6 388 28.9
Carub.0002s1879 Capsella rubella HOM05D000350 ORTHO05D000228 1.6e-12 78.2 348 29.6
Sopen11g010700 Solanum pennellii HOM05D000350 ORTHO05D000228 2.7e-12 77.4 387 29.5
BraA09t37482Z Brassica rapa HOM05D000350 ORTHO05D000228 3.5e-12 77.0 403 29.0
TPR.G2073 Trifolium pratense HOM05D000350 ORTHO05D000228 7.9e-12 75.9 369 27.1
Sp5g27080 Schrenkiella parvula HOM05D000350 ORTHO05D000228 1.0e-11 75.5 367 28.1
AL1G50420 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 2.3e-11 74.3 355 30.7
Pp3c10_20400 Physcomitrium patens HOM05D000350 ORTHO05D000228 2.3e-11 74.3 470 29.1
Pp3c3_24660 Physcomitrium patens HOM05D000350 ORTHO05D000228 2.3e-11 74.3 481 27.9
AagrBONN_evm.TU.Sc2ySwM_344.85 Anthoceros agrestis HOM05D026980 ORTHO05D000228 6.7e-11 72.8 360 30.0
AT1G35560 Arabidopsis thaliana HOM05D000350 ORTHO05D000228 8.7e-11 72.4 424 27.4
BolC6t39664H Brassica oleracea HOM05D000350 ORTHO05D000228 8.7e-11 72.4 400 27.5
BcaB05g24699 Brassica carinata HOM05D000350 ORTHO05D000228 1.5e-10 71.6 340 29.1
Thhalv10001860m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 2.5e-10 70.9 386 27.5
A02p17620 Brassica napus HOM05D000350 ORTHO05D000228 4.3e-10 70.1 362 28.2
BraA02t06808Z Brassica rapa HOM05D000350 ORTHO05D000228 4.3e-10 70.1 365 28.2
Peaxi162Scf00268g00069 Petunia axillaris HOM05D000350 ORTHO05D000228 7.4e-10 69.3 202 29.2
BcaC08g46648 Brassica carinata HOM05D000350 ORTHO05D000228 1.3e-09 68.6 401 27.4
CSS0010873 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.3e-09 68.6 348 27.9
SEGI_33313 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 1.6e-09 68.2 502 27.5
Oeu024889.1 Olea europaea HOM05D000350 ORTHO05D000228 2.2e-09 67.8 350 27.7
C06p46110 Brassica napus HOM05D000350 ORTHO05D000228 2.8e-09 67.4 401 27.2
BcaC03g15325 Brassica carinata HOM05D000350 ORTHO05D000228 4.8e-09 66.6 362 27.6
C02p29300 Brassica napus HOM05D000350 ORTHO05D000228 4.8e-09 66.6 362 27.6
BolC2t08981H Brassica oleracea HOM05D000350 ORTHO05D000228 4.8e-09 66.6 362 27.6
Aa31LG2G10990 Aethionema arabicum HOM05D000350 ORTHO05D000228 8.2e-09 65.9 416 28.6
BraA07t31384Z Brassica rapa HOM05D000350 ORTHO05D000228 1.1e-08 65.5 394 27.2
Thhalv10023507m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 1.1e-08 65.5 389 27.8
Thhalv10018667m.g Eutrema salsugineum HOM05D000350 ORTHO05D000228 3.1e-08 63.9 425 25.6
THA.LOC104816371 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 3.1e-08 63.9 382 29.1
THA.LOC104825333 Tarenaya hassleriana HOM05D000350 ORTHO05D000228 5.3e-08 63.2 373 26.5
AL2G18050 Arabidopsis lyrata HOM05D000350 ORTHO05D000228 1.2e-07 62.0 379 26.6
SEGI_40646 Sequoiadendron giganteum HOM05D000350 ORTHO05D000228 2.6e-07 60.8 192 34.9
SGA_v2.0_scaffold7G04072 Striga asiatica HOM05D000350 ORTHO05D000228 5.9e-07 59.7 349 26.9
CSS0021064 Camellia sinensis var. sinensis HOM05D000350 ORTHO05D000228 1.0e-06 58.9 348 26.1
CAN.G308.67 Capsicum annuum HOM05D000350 ORTHO05D000228 1.3e-06 58.5 330 25.8
BcaC08g46646 Brassica carinata HOM05D000350 ORTHO05D000228 1.7e-06 58.2 390 27.7
A07p38190 Brassica napus HOM05D000350 ORTHO05D000228 2.2e-06 57.8 397 26.4
BcaC08g46650 Brassica carinata HOM05D000350 ORTHO05D000228 5.0e-06 56.6 391 27.9


User provided reference genes

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