Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 2.1e-56 222.2 120 100.0
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 9.4e-41 170.2 116 77.6
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.8e-39 166.0 113 77.0
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 2.3e-39 165.6 120 75.8
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 6.7e-39 164.1 110 75.5
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 6.7e-39 164.1 109 75.2
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 8.8e-39 163.7 116 75.9
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 2.0e-38 162.5 109 74.3
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 2.6e-38 162.2 109 73.4
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 3.3e-38 161.8 117 70.9
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.7e-38 161.0 108 76.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 5.7e-38 161.0 110 75.5
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 7.4e-38 160.6 109 72.5
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 7.4e-38 160.6 108 75.9
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 9.7e-38 160.2 106 78.3
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 1.3e-37 159.8 116 68.1
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.3e-37 159.8 117 71.8
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.7e-37 159.5 116 72.4
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 2.2e-37 159.1 117 70.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 3.7e-37 158.3 111 75.7
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.7e-37 158.3 116 71.6
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 6.3e-37 157.5 111 71.2
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 8.2e-37 157.1 108 73.1
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.1e-36 156.8 116 65.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.4e-36 156.4 113 69.0
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 1.4e-36 156.4 110 73.6
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.1e-36 155.2 111 71.2
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 4.1e-36 154.8 110 72.7
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 4.1e-36 154.8 110 72.7
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 7.0e-36 154.1 116 68.1
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 7.0e-36 154.1 116 66.4
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 9.1e-36 153.7 111 69.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 9.1e-36 153.7 111 73.0
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.2e-35 153.3 110 70.0
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.5e-35 152.9 113 69.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.0e-35 152.5 108 71.3
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 112 69.6
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.6e-35 152.1 118 67.8
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.6e-35 152.1 113 69.0
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 2.6e-35 152.1 113 69.9
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 4.5e-35 151.4 111 69.4
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 4.5e-35 151.4 113 69.9
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 69.4
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 69.4
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 69.4
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 69.4
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 69.4
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 7.7e-35 150.6 111 70.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 7.7e-35 150.6 106 72.6
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.0e-34 150.2 113 68.1
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.0e-34 150.2 108 69.4
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.3e-34 149.8 109 70.6
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.3e-34 149.8 110 71.8
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 1.3e-34 149.8 116 66.4
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.7e-34 149.4 109 67.9
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.7e-34 149.4 104 76.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 2.2e-34 149.1 111 69.4
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.2e-34 149.1 106 70.8
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 3.8e-34 148.3 111 67.6
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 3.8e-34 148.3 111 68.5
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 3.8e-34 148.3 113 66.4
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 6.5e-34 147.5 108 69.4
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 6.5e-34 147.5 112 68.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 8.5e-34 147.1 111 67.6
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 1.1e-33 146.7 110 68.2
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 1.4e-33 146.4 115 66.1
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 3.2e-33 145.2 110 67.3
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 3.2e-33 145.2 106 68.9
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 4.2e-33 144.8 116 63.8
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 5.5e-33 144.4 106 67.9
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 9.4e-33 143.7 110 67.3
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.2e-32 143.3 111 66.7
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.6e-32 142.9 113 64.6
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 2.1e-32 142.5 111 65.8
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 2.1e-32 142.5 110 65.5
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 3.6e-32 141.7 109 65.1
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 3.6e-32 141.7 107 66.4
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 4.7e-32 141.4 110 67.3
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.0e-31 140.2 116 61.2
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.0e-31 140.2 106 67.0
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.8e-31 139.4 106 67.0
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 3.0e-31 138.7 116 59.5
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 6.7e-31 137.5 134 56.7
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.1e-30 136.7 101 71.3
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 1.1e-30 136.7 114 59.6
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-30 136.0 100 70.0
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 6.3e-29 131.0 105 64.8
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.1e-28 130.2 84 78.6
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.1e-28 128.6 110 64.5
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 5.3e-28 127.9 172 45.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 5.3e-28 127.9 89 76.4
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 9.1e-28 127.1 83 77.1
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.6e-27 125.6 86 69.8
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.6e-27 125.6 86 69.8
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 5.9e-27 124.4 89 73.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 5.9e-27 124.4 83 78.3
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 1.7e-26 122.9 82 73.2
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 1.7e-26 122.9 87 72.4
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.7e-26 122.9 82 74.4
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.9e-25 119.4 94 70.2
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.5e-25 119.0 81 74.1
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 3.2e-25 118.6 84 73.8
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 2.7e-24 115.5 81 71.6
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.7e-24 114.8 84 72.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 4.7e-24 114.8 113 58.4
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.0e-23 113.6 76 75.0
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.7e-19 99.0 80 60.0
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 6.5e-18 94.4 79 62.0
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 9.4e-17 90.5 108 47.2
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 3.6e-16 88.6 116 50.9
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 4.7e-16 88.2 67 64.2
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 8.0e-16 87.4 64 70.3
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.3e-15 85.9 79 57.0
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.2e-14 83.6 57 73.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.2e-13 79.3 50 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.4e-12 76.6 110 42.7
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 9.1e-12 73.9 64 67.2
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.0e-07 58.5 111 36.0


User provided reference genes

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