Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 5.1e-92 340.9 153 100.0
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 5.0e-47 191.4 152 63.8
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 2.6e-27 125.9 184 40.2
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 4.4e-27 125.2 181 40.3
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 1.3e-26 123.6 183 39.3
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 2.2e-26 122.9 183 38.8
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 2.9e-26 122.5 184 39.1
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.9e-26 122.5 189 38.1
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 3.7e-26 122.1 184 39.1
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 4.9e-26 121.7 186 38.2
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 4.9e-26 121.7 186 38.2
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 6.4e-26 121.3 186 36.6
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 1.1e-25 120.6 185 36.8
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.9e-25 119.8 189 37.0
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 2.4e-25 119.4 186 36.0
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 2.4e-25 119.4 186 36.0
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 2.4e-25 119.4 186 39.8
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 3.2e-25 119.0 190 36.8
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 3.2e-25 119.0 186 36.6
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 4.1e-25 118.6 186 36.6
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 4.1e-25 118.6 186 36.0
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 4.1e-25 118.6 186 36.0
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 5.4e-25 118.2 185 36.8
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 5.4e-25 118.2 189 37.6
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 5.4e-25 118.2 184 38.0
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 5.4e-25 118.2 185 36.2
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 7.0e-25 117.9 184 38.0
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 7.0e-25 117.9 186 37.1
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 1.2e-24 117.1 185 38.9
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 1.2e-24 117.1 194 38.1
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 2.0e-24 116.3 186 39.8
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 2.7e-24 115.9 184 38.0
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 2.7e-24 115.9 186 36.0
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 2.7e-24 115.9 185 35.1
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 2.7e-24 115.9 185 35.1
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 2.7e-24 115.9 185 35.1
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 3.5e-24 115.5 183 36.6
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 3.5e-24 115.5 185 35.7
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 6.0e-24 114.8 186 35.5
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 6.0e-24 114.8 186 34.9
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 6.0e-24 114.8 186 34.9
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 1.0e-23 114.0 194 36.1
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.3e-23 112.8 183 36.6
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 3.0e-23 112.5 184 37.0
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 3.0e-23 112.5 184 37.5
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 3.9e-23 112.1 189 37.6
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 3.9e-23 112.1 189 37.6
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 6.6e-23 111.3 184 37.0
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 6.6e-23 111.3 188 36.2
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 8.6e-23 110.9 183 36.1
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 8.6e-23 110.9 183 37.7
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 1.5e-22 110.2 185 34.6
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 1.9e-22 109.8 182 35.7
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 2.5e-22 109.4 145 40.7
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 2.5e-22 109.4 187 34.2
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 3.3e-22 109.0 187 36.4
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 4.3e-22 108.6 182 35.2
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 7.3e-22 107.8 184 36.4
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.3e-22 107.8 189 36.5
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 7.3e-22 107.8 181 35.9
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 9.5e-22 107.5 191 34.6
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 9.5e-22 107.5 186 34.9
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 9.5e-22 107.5 203 33.5
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 1.2e-21 107.1 185 35.7
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 2.1e-21 106.3 203 34.0
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 4.7e-21 105.1 188 35.6
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 6.2e-21 104.8 184 33.7
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 6.2e-21 104.8 181 34.3
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.3e-20 102.8 186 36.0
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 2.3e-20 102.8 186 36.0
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 4.0e-20 102.1 183 34.4
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 5.2e-20 101.7 174 33.9
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 5.2e-20 101.7 177 37.9
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 5.2e-20 101.7 186 35.5
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 6.8e-20 101.3 180 35.6
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 6.8e-20 101.3 182 35.2
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 6.8e-20 101.3 186 36.0
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 6.8e-20 101.3 182 34.1
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.5e-19 100.1 184 35.3
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 2.0e-19 99.8 181 34.3
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 2.6e-19 99.4 180 35.6
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.6e-19 99.4 154 38.3
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 4.4e-19 98.6 182 32.4
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 5.8e-19 98.2 180 34.4
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 5.8e-19 98.2 181 33.1
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 2.9e-18 95.9 176 37.5
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 4.9e-18 95.1 251 28.3
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 6.4e-18 94.7 183 36.1
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 2.4e-17 92.8 169 34.9
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 3.2e-17 92.4 179 35.2
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 3.2e-17 92.4 181 32.6
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 5.4e-17 91.7 184 32.1
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 9.2e-17 90.9 208 32.2
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 1.2e-16 90.5 184 31.5
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.6e-16 90.1 181 31.5
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 2.1e-16 89.7 209 30.1
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 2.7e-16 89.4 185 33.5
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 7.8e-16 87.8 195 32.8
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 7.8e-16 87.8 178 34.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 2.3e-15 86.3 184 31.5
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 6.6e-15 84.7 195 30.3
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 8.6e-15 84.3 180 31.1
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 1.5e-14 83.6 153 34.0
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 3.3e-14 82.4 207 30.0
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.8e-13 79.3 189 31.7
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 6.2e-13 78.2 186 28.5
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 6.2e-13 78.2 178 30.9
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 1.1e-12 77.4 186 31.2
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 3.1e-12 75.9 177 33.9
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 5.8e-11 71.6 122 32.8
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 1.7e-10 70.1 148 31.1
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.9e-10 68.6 43 62.8
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 8.4e-10 67.8 191 27.2
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.2e-09 65.9 43 65.1
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 5.4e-09 65.1 58 51.7
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 7.1e-09 64.7 43 62.8
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.2e-08 63.9 43 65.1
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 3.5e-08 62.4 43 58.1
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 6.0e-08 61.6 168 28.6
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 3.0e-07 59.3 41 56.1
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 6.6e-07 58.2 57 45.6
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 5.6e-06 55.1 43 55.8


User provided reference genes

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