Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 2.0e-206 722.2 372 100.0
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.7e-118 429.5 347 66.0
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.3e-112 410.6 333 65.5
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 2.4e-111 406.4 352 60.2
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 4.1e-111 405.6 355 60.0
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.7e-110 402.9 355 60.0
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 5.9e-110 401.7 370 59.5
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 5.9e-110 401.7 339 63.1
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-108 397.5 353 60.9
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.9e-108 396.7 363 58.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 3.3e-108 396.0 332 63.9
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 4.3e-108 395.6 331 63.1
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 5.6e-108 395.2 352 60.5
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 7.3e-108 394.8 337 60.5
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 9.5e-108 394.4 337 60.8
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 9.5e-108 394.4 337 61.1
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 2.1e-107 393.3 363 57.6
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.8e-107 392.9 338 61.5
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 3.6e-107 392.5 341 60.4
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 6.1e-107 391.7 339 61.7
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 8.0e-107 391.3 334 61.4
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 3.0e-106 389.4 366 58.2
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 3.0e-106 389.4 365 57.0
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 6.8e-106 388.3 359 57.7
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 8.9e-106 387.9 346 58.7
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 2.6e-105 386.3 346 58.1
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.4e-105 386.0 330 62.1
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 3.4e-105 386.0 330 62.1
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 5.7e-105 385.2 335 61.5
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.3e-104 384.0 363 58.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.7e-104 383.6 374 56.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.2e-104 383.3 332 61.1
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 3.7e-104 382.5 362 57.5
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 4.9e-104 382.1 362 55.0
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 4.9e-104 382.1 362 55.0
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 6.4e-104 381.7 334 59.0
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 8.3e-104 381.3 363 57.3
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.1e-103 380.9 353 59.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 2.4e-103 379.8 330 58.5
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.1e-103 379.0 362 58.8
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.6e-102 377.1 367 56.1
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.0e-102 376.7 343 58.0
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 5.9e-102 375.2 339 59.3
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 5.9e-102 375.2 338 59.5
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.0e-101 374.4 331 61.9
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 1.0e-101 374.4 332 61.4
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.0e-101 374.4 364 57.4
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 5.0e-101 372.1 339 58.1
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 5.0e-101 372.1 359 55.4
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.5e-100 370.5 353 56.1
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.5e-100 370.5 361 56.5
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.9e-100 370.2 333 59.2
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 4.3e-100 369.0 332 59.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 4.3e-100 369.0 333 59.5
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.6e-100 368.6 328 58.5
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 9.5e-100 367.9 341 58.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.2e-99 367.5 339 58.7
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 1.6e-99 367.1 350 56.3
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 2.1e-99 366.7 350 56.0
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.1e-99 366.7 330 57.3
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.1e-99 366.7 330 57.3
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.8e-99 366.3 333 59.2
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.8e-99 366.3 332 60.5
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 3.6e-99 365.9 332 57.2
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 4.7e-99 365.5 331 60.7
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 6.2e-99 365.2 337 58.2
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.4e-98 364.0 304 64.8
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 1.4e-98 364.0 344 55.5
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.4e-98 364.0 331 58.6
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.4e-98 364.0 349 57.6
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.8e-98 363.6 350 55.4
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 2.3e-98 363.2 351 58.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 6.8e-98 361.7 341 57.5
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 2.6e-97 359.8 333 56.8
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 3.4e-97 359.4 335 57.3
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 7.5e-97 358.2 360 53.6
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 7.5e-97 358.2 333 56.5
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 1.7e-96 357.1 339 56.0
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 3.7e-96 355.9 334 56.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 8.3e-96 354.8 333 57.7
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 1.1e-95 354.4 365 53.2
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.7e-93 347.1 306 58.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 3.9e-93 345.9 366 51.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.1e-92 344.4 342 55.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.9e-92 343.6 340 56.2
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 2.5e-92 343.2 367 53.7
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 4.3e-92 342.4 358 52.8
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 7.3e-92 341.7 337 54.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 7.3e-92 341.7 332 56.3
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.2e-91 340.9 363 54.3
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.8e-91 339.7 340 55.9
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 3.6e-91 339.3 335 54.6
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.6e-91 339.3 367 53.1
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 8.1e-91 338.2 359 52.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 5.2e-90 335.5 330 53.9
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 3.4e-89 332.8 312 57.4
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 2.3e-85 320.1 349 52.7
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 1.2e-83 314.3 331 53.2
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 2.1e-83 313.5 276 58.7
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 2.3e-82 310.1 331 52.9
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 3.1e-82 309.7 349 49.6
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.4e-81 306.2 276 58.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 5.8e-81 305.4 350 50.3
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.9e-80 303.1 357 48.2
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 2.2e-72 276.9 357 43.1
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 6.0e-70 268.9 345 44.9
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.0e-69 266.5 377 41.9
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.5e-60 237.7 342 37.7
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.5e-52 211.1 226 52.7
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 3.7e-51 206.5 293 41.6
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 3.8e-40 169.9 353 35.1
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.6e-30 137.9 323 28.8
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 5.2e-13 79.7 210 31.4
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.7e-11 74.7 82 46.3
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 1.4e-10 71.6 90 45.6
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 9.4e-07 58.9 124 34.7


User provided reference genes

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