Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.2e-98 363.2 193 100.0
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 9.6e-96 353.6 193 96.4
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 6.5e-76 287.7 192 79.7
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 1.4e-75 286.6 191 79.1
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.4e-75 286.6 191 77.5
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 7.2e-75 284.3 192 78.1
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.1e-74 282.7 194 77.8
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.1e-74 282.7 194 77.8
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 2.1e-74 282.7 192 79.2
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 1.4e-73 280.0 195 77.4
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 1.8e-73 279.6 192 76.6
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.3e-73 279.3 195 77.4
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 3.0e-73 278.9 192 77.1
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.5e-72 275.8 192 75.5
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.5e-72 275.8 193 75.6
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 9.7e-72 273.9 193 75.6
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 9.7e-72 273.9 189 76.7
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 1.3e-71 273.5 193 76.2
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 2.2e-71 272.7 163 86.5
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 2.8e-71 272.3 200 73.5
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 3.7e-71 271.9 193 75.1
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 3.7e-71 271.9 192 76.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 6.3e-71 271.2 193 75.1
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.1e-70 270.4 192 75.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.1e-70 270.4 197 73.1
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.4e-70 270.0 192 75.0
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.4e-70 270.0 192 75.0
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 2.4e-70 269.2 193 72.5
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-70 269.2 159 87.4
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-70 269.2 159 87.4
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 2.4e-70 269.2 192 75.0
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 3.1e-70 268.9 192 75.0
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 4.1e-70 268.5 200 73.5
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 4.1e-70 268.5 196 72.4
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 4.1e-70 268.5 195 72.8
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 4.1e-70 268.5 193 73.6
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 5.3e-70 268.1 200 74.0
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 74.5
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 5.3e-70 268.1 192 74.5
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 5.3e-70 268.1 161 85.7
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 1.2e-69 266.9 191 73.8
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.0e-69 266.2 192 73.4
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 2.0e-69 266.2 164 84.8
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.0e-69 266.2 192 74.5
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.0
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.0
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.0
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.0
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.5
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 2.6e-69 265.8 193 73.1
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 2.6e-69 265.8 192 74.0
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 3.4e-69 265.4 165 83.0
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 4.5e-69 265.0 192 73.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 4.5e-69 265.0 169 79.3
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 4.5e-69 265.0 191 73.8
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 7.7e-69 264.2 193 71.5
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 7.7e-69 264.2 169 79.9
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 1.0e-68 263.8 191 72.8
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.3e-68 263.5 192 73.4
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.3e-68 263.5 192 73.4
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.3e-68 263.5 169 77.5
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.3e-68 263.5 169 79.3
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.3e-68 263.5 167 80.8
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 1.3e-68 263.5 159 85.5
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 2.2e-68 262.7 162 84.0
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 2.9e-68 262.3 150 90.0
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 3.8e-68 261.9 165 81.8
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 5.0e-68 261.5 193 73.6
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 8.5e-68 260.8 211 66.8
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.4e-67 260.0 193 69.4
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.4e-67 260.0 192 69.8
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.9e-67 259.6 169 76.3
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 2.5e-67 259.2 193 71.0
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.2e-67 258.8 196 69.4
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 3.2e-67 258.8 159 84.3
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 5.5e-67 258.1 193 68.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 7.2e-67 257.7 189 70.9
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 7.2e-67 257.7 191 71.2
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 7.2e-67 257.7 162 82.1
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.2e-66 256.9 193 70.5
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 1.6e-66 256.5 196 69.9
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.6e-66 256.5 159 82.4
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.6e-66 256.5 193 71.0
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 3.6e-66 255.4 191 68.6
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 7.9e-66 254.2 159 82.4
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 7.9e-66 254.2 192 71.4
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.4e-65 253.4 164 78.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.3e-65 252.7 161 79.5
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 3.0e-65 252.3 169 79.3
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 6.7e-65 251.1 167 75.4
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 8.8e-65 250.8 161 78.9
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 8.8e-65 250.8 192 68.8
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 1.3e-63 246.9 159 79.9
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.4e-62 243.4 159 79.9
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 4.1e-62 241.9 159 78.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.5e-61 240.0 187 69.0
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 4.7e-58 228.4 161 68.3
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 3.9e-57 225.3 144 83.3
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 2.8e-47 192.6 166 57.8
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 3.5e-45 185.7 157 54.8
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 7.2e-43 177.9 105 87.6
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 3.0e-41 172.6 156 54.5
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.5e-40 170.2 137 68.6
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.4e-40 169.1 158 53.2
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.4e-40 169.1 158 53.2
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.4e-40 169.1 158 53.2
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.4e-40 169.1 158 53.2
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.4e-38 162.9 103 81.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 9.1e-38 161.0 94 87.2
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.7e-37 159.5 102 80.4
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 3.5e-37 159.1 161 49.7
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 9.5e-35 151.0 103 76.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 2.8e-31 139.4 114 67.5
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 5.9e-29 131.7 90 76.7
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.5e-27 127.1 86 73.3
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 4.4e-24 115.5 71 83.1
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 5.0e-20 102.1 167 33.5
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.9e-19 100.1 157 35.7
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 3.6e-18 95.9 88 59.1
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 6.2e-18 95.1 91 57.1
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 3.1e-17 92.8 88 58.0
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 6.8e-17 91.7 175 32.0
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.9e-15 86.3 71 59.2
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 2.3e-12 76.6 184 31.0
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.6e-10 70.5 59 62.7
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.4e-09 67.4 44 68.2
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 4.4e-08 62.4 61 49.2
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-06 57.8 48 62.5
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 7.1e-06 55.1 161 31.1


User provided reference genes

Program Settings