Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0753 Ceratophyllum demersum HOM05D002588 ORTHO05D027846 4.3e-78 294.7 157 100.0
CDE04G2806 Ceratophyllum demersum HOM05D002588 ORTHO05D002979 6.7e-63 244.2 140 95.0
TAR628G0795 Trochodendron aralioides HOM05D002588 ORTHO05D002979 2.5e-54 215.7 154 69.5
CAN.G1330.1 Capsicum annuum HOM05D002588 ORTHO05D002979 3.1e-52 208.8 154 69.5
Nitab4.5_0001756g0200 Nicotiana tabacum HOM05D002588 ORTHO05D002979 1.2e-51 206.8 151 69.5
Manes.18G003000 Manihot esculenta HOM05D002588 ORTHO05D002979 2.6e-51 205.7 154 68.2
Sopen04g036300 Solanum pennellii HOM05D002588 ORTHO05D002979 2.6e-51 205.7 154 68.2
Solyc04g082670.4 Solanum lycopersicum HOM05D002588 ORTHO05D002979 7.7e-51 204.1 154 66.9
MSTRG.999 Avicennia marina HOM05D002588 ORTHO05D002979 3.8e-50 201.8 154 64.9
HPP92_012827 Vanilla planifolia HOM05D002588 ORTHO05D002979 5.0e-50 201.4 154 64.3
Lj4C6T3 Lonicera japonica HOM05D002588 ORTHO05D002979 8.5e-50 200.7 154 66.2
PGR083G2033 Punica granatum HOM05D002588 ORTHO05D002979 1.1e-49 200.3 154 68.2
CiPaw.08G076400 Carya illinoinensis HOM05D002588 ORTHO05D002979 1.4e-49 199.9 154 66.2
CiPaw.07G135000 Carya illinoinensis HOM05D002588 ORTHO05D002979 4.2e-49 198.4 154 65.6
PSO541G2419 Papaver somniferum HOM05D002588 ORTHO05D002979 4.2e-49 198.4 155 65.2
Oeu016872.1 Olea europaea HOM05D002588 ORTHO05D002979 5.5e-49 198.0 154 63.6
Thhalv10018293m.g Eutrema salsugineum HOM05D002588 ORTHO05D002979 7.2e-49 197.6 153 66.7
Actinidia15516 Actinidia chinensis HOM05D002588 ORTHO05D002979 9.4e-49 197.2 154 65.6
AL2G36500 Arabidopsis lyrata HOM05D002588 ORTHO05D002979 9.4e-49 197.2 153 66.7
Aqoxy6G01565 Aquilegia oxysepala HOM05D002588 ORTHO05D002979 1.2e-48 196.8 154 65.6
arahy.Tifrunner.gnm1.ann1.Z621FR Arachis hypogaea HOM05D002588 ORTHO05D002979 2.1e-48 196.1 154 64.9
Duzib093G0154 Durio zibethinus HOM05D002588 ORTHO05D002979 2.1e-48 196.1 154 66.2
Eucgr.F01802 Eucalyptus grandis HOM05D002588 ORTHO05D002979 2.1e-48 196.1 154 63.0
AT1G76400 Arabidopsis thaliana HOM05D002588 ORTHO05D002979 2.7e-48 195.7 154 65.6
ClCG08G009250 Citrullus lanatus HOM05D002588 ORTHO05D002979 2.7e-48 195.7 154 64.9
Haze_22845 Corylus avellana HOM05D002588 ORTHO05D002979 2.7e-48 195.7 154 65.6
Peaxi162Scf00680g00414 Petunia axillaris HOM05D002588 ORTHO05D002979 2.7e-48 195.7 154 66.2
Aa31LG4G6470 Aethionema arabicum HOM05D002588 ORTHO05D002979 3.6e-48 195.3 153 66.0
EL10Ac1g01896 Beta vulgaris HOM05D002588 ORTHO05D002979 3.6e-48 195.3 153 64.7
Manes.05G125800 Manihot esculenta HOM05D002588 ORTHO05D002979 3.6e-48 195.3 154 64.3
arahy.Tifrunner.gnm1.ann1.6K40U8 Arachis hypogaea HOM05D002588 ORTHO05D002979 4.6e-48 194.9 154 64.3
arahy.Tifrunner.gnm1.ann1.S816BA Arachis hypogaea HOM05D002588 ORTHO05D002979 4.6e-48 194.9 154 64.3
Cfa014123 Carpinus fangiana HOM05D002588 ORTHO05D002979 4.6e-48 194.9 154 64.9
Sp5g31550 Schrenkiella parvula HOM05D002588 ORTHO05D002979 6.1e-48 194.5 153 67.3
ECA232G1948 Erigeron canadensis HOM05D002588 ORTHO05D002979 7.9e-48 194.1 153 64.1
MD06G1005600 Malus domestica HOM05D002588 ORTHO05D002979 7.9e-48 194.1 154 64.9
Ah.11g042080 Amaranthus hybridus HOM05D002588 ORTHO05D002979 1.0e-47 193.7 153 64.1
FAN13G3315 Fragaria x ananassa HOM05D002588 ORTHO05D002979 1.0e-47 193.7 154 66.2
Lalb_Chr08g0246501 Lupinus albus HOM05D002588 ORTHO05D002979 1.0e-47 193.7 154 64.3
THA.LOC104811998 Tarenaya hassleriana HOM05D002588 ORTHO05D002979 1.0e-47 193.7 153 65.4
GSVIVG01013410001 Vitis vinifera HOM05D002588 ORTHO05D002979 1.0e-47 193.7 154 66.9
Actinidia17067 Actinidia chinensis HOM05D002588 ORTHO05D002979 1.4e-47 193.4 154 64.3
FvH4_5g25900 Fragaria vesca HOM05D002588 ORTHO05D002979 1.4e-47 193.4 154 66.2
Prupe.5G006900 Prunus persica HOM05D002588 ORTHO05D002979 1.4e-47 193.4 154 66.2
QL02p015375 Quercus lobata HOM05D002588 ORTHO05D002979 1.8e-47 193.0 154 66.9
QL02p015403 Quercus lobata HOM05D002588 ORTHO05D002979 1.8e-47 193.0 154 66.9
Sabra05G0197500 Salix brachista HOM05D002588 ORTHO05D002979 1.8e-47 193.0 154 63.0
Sed0000615 Sechium edule HOM05D002588 ORTHO05D002979 1.8e-47 193.0 154 63.6
CSS0035039 Camellia sinensis var. sinensis HOM05D002588 ORTHO05D002979 2.3e-47 192.6 154 63.0
FAN18G1597 Fragaria x ananassa HOM05D002588 ORTHO05D002979 2.3e-47 192.6 154 65.6
FAN08G2121 Fragaria x ananassa HOM05D002588 ORTHO05D002979 3.0e-47 192.2 154 66.2
Gohir.D02G101500 Gossypium hirsutum HOM05D002588 ORTHO05D002979 3.0e-47 192.2 154 64.9
Gorai.005G114900 Gossypium raimondii HOM05D002588 ORTHO05D002979 3.0e-47 192.2 154 64.9
Potri.002G006600 Populus trichocarpa HOM05D002588 ORTHO05D002979 3.0e-47 192.2 154 61.7
CARHR069950 Cardamine hirsuta HOM05D002588 ORTHO05D002979 3.9e-47 191.8 153 65.4
BcaC08g47137 Brassica carinata HOM05D002588 ORTHO05D002979 6.7e-47 191.0 153 66.0
FAN04G1851 Fragaria x ananassa HOM05D002588 ORTHO05D002979 6.7e-47 191.0 154 66.2
HanXRQChr05g0144761 Helianthus annuus HOM05D002588 ORTHO05D002979 6.7e-47 191.0 154 63.0
Hund01794 Selenicereus undatus HOM05D002588 ORTHO05D002979 6.7e-47 191.0 154 65.6
PGSC0003DMG400009917 Solanum tuberosum HOM05D002588 ORTHO05D002979 6.7e-47 191.0 154 63.6
Potri.005G255000 Populus trichocarpa HOM05D002588 ORTHO05D002979 1.5e-46 189.9 154 61.0
RcHm_v2.0_Chr7g0216411 Rosa chinensis HOM05D002588 ORTHO05D002979 1.5e-46 189.9 154 65.6
Lj1g0006787 Lotus japonicus HOM05D002588 ORTHO05D002979 2.0e-46 189.5 153 63.4
Atru.chr13.82 Acer truncatum HOM05D002588 ORTHO05D002979 2.6e-46 189.1 154 64.3
CsaV3_6G031390 Cucumis sativus L. HOM05D002588 ORTHO05D002979 2.6e-46 189.1 154 63.0
Migut.C00376 Erythranthe guttata HOM05D002588 ORTHO05D002979 3.3e-46 188.7 153 62.1
SalBow7G1725 Salvia bowleyana HOM05D002588 ORTHO05D002979 3.3e-46 188.7 153 62.7
vmacro21779 Vaccinium macrocarpon HOM05D002588 ORTHO05D002979 3.3e-46 188.7 154 62.3
Gohir.1Z049473 Gossypium hirsutum HOM05D002588 ORTHO05D002979 4.4e-46 188.3 154 63.6
BcaC08g47255 Brassica carinata HOM05D002588 ORTHO05D002979 5.7e-46 188.0 153 65.4
Rhsim06G0004300 Rhododendron simsii HOM05D002588 ORTHO05D002979 5.7e-46 188.0 154 61.7
Cpa.g.sc26.152 Carica papaya HOM05D002588 ORTHO05D002979 7.4e-46 187.6 154 60.4
Thecc.08G063900 Theobroma cacao HOM05D002588 ORTHO05D002979 7.4e-46 187.6 154 63.0
Sabra02G0004700 Salix brachista HOM05D002588 ORTHO05D002979 9.7e-46 187.2 154 61.0
TPR.G38095 Trifolium pratense HOM05D002588 ORTHO05D002979 9.7e-46 187.2 154 61.0
TWI12G0351 Tripterygium wilfordii HOM05D002588 ORTHO05D002979 9.7e-46 187.2 153 62.7
Lsat_1_v5_gn_9_41821 Lactuca sativa HOM05D002588 ORTHO05D002979 1.3e-45 186.8 153 60.8
Ciclev10000611m.g Citrus clementina HOM05D002588 ORTHO05D002979 1.7e-45 186.4 154 63.0
VMungo1309G2669 Vigna mungo HOM05D002588 ORTHO05D002979 1.7e-45 186.4 154 64.9
C06p50590 Brassica napus HOM05D002588 ORTHO05D002979 2.8e-45 185.7 153 64.1
BolC6t40084H Brassica oleracea HOM05D002588 ORTHO05D002979 2.8e-45 185.7 153 64.1
AUR62024108 Chenopodium quinoa HOM05D002588 ORTHO05D002979 2.8e-45 185.7 153 61.4
Cc10_g00350 Coffea canephora HOM05D002588 ORTHO05D002979 2.8e-45 185.7 153 62.7
Phvul.009G007200 Phaseolus vulgaris HOM05D002588 ORTHO05D002979 2.8e-45 185.7 154 64.9
Os05g0301500 Oryza sativa ssp. japonica HOM05D002588 ORTHO05D002979 3.7e-45 185.3 153 61.4
SGA_v2.0_scaffold133G34598 Striga asiatica HOM05D002588 ORTHO05D002979 4.8e-45 184.9 154 63.0
Ca_15393_v3 Cicer arietinum L. HOM05D002588 ORTHO05D002979 6.3e-45 184.5 154 59.1
Ca_29626_v3 Cicer arietinum L. HOM05D002588 ORTHO05D002979 6.3e-45 184.5 154 59.1
Medtr3g115980 Medicago truncatula HOM05D002588 ORTHO05D002979 8.2e-45 184.1 154 59.7
Glyma.04G015300 Glycine max HOM05D002588 ORTHO05D002979 1.1e-44 183.7 154 63.6
Gorai.002G113600 Gossypium raimondii HOM05D002588 ORTHO05D002979 1.1e-44 183.7 153 63.4
A07p42020 Brassica napus HOM05D002588 ORTHO05D002979 1.4e-44 183.3 153 64.1
BraA07t31732Z Brassica rapa HOM05D002588 ORTHO05D002979 1.4e-44 183.3 153 64.1
Lalb_Chr11g0061411 Lupinus albus HOM05D002588 ORTHO05D002979 1.4e-44 183.3 154 61.0
AUR62035156 Chenopodium quinoa HOM05D002588 ORTHO05D002979 1.8e-44 183.0 156 61.5
Gohir.D01G087900 Gossypium hirsutum HOM05D002588 ORTHO05D002979 2.4e-44 182.6 153 62.7
Psat5g008880 Pisum sativum HOM05D002588 ORTHO05D002979 2.4e-44 182.6 154 62.3
DCAR_013937 Daucus carota HOM05D002588 ORTHO05D002979 1.5e-43 179.9 154 61.7
Glyma.06G015400 Glycine max HOM05D002588 ORTHO05D002979 1.5e-43 179.9 154 63.0
TWI56G1080 Tripterygium wilfordii HOM05D002588 ORTHO05D002979 2.0e-43 179.5 154 60.4
Hma1.2p1_0612F.1_g188990 Hydrangea macrophylla HOM05D002588 ORTHO05D002979 3.8e-42 175.3 133 67.7
Carub.0002s2330 Capsella rubella HOM05D002588 ORTHO05D002979 5.0e-42 174.9 153 61.4
ATR0807G017 Amborella trichopoda HOM05D002588 ORTHO05D002979 1.1e-41 173.7 154 55.2
Duzib116G0554 Durio zibethinus HOM05D002588 ORTHO05D002979 1.1e-41 173.7 155 59.4
THA.LOC104813744 Tarenaya hassleriana HOM05D002588 ORTHO05D002979 2.5e-41 172.6 153 59.5
MELO3C026524.2 Cucumis melo HOM05D002588 ORTHO05D002979 2.8e-37 159.1 137 59.9
BcaC08g45532 Brassica carinata HOM05D002588 ORTHO05D032163 1.2e-32 143.7 158 52.5
C06p32070 Brassica napus HOM05D002588 ORTHO05D032163 1.2e-32 143.7 158 52.5
unitig_0.g327 Utricularia gibba HOM05D002588 ORTHO05D002979 2.3e-31 139.4 153 49.7
Mapoly0008s0275 Marchantia polymorpha HOM05D002588 ORTHO05D002979 3.3e-30 135.6 153 48.4
COL.COLO4_37859 Corchorus olitorius HOM05D002588 ORTHO05D002979 2.8e-29 132.5 130 56.9
MBI05_g05757_MAGBIO Magnolia biondii HOM05D002588 ORTHO05D002979 8.2e-29 131.0 157 49.7
Dinv38453 Davidia involucrata HOM05D002588 ORTHO05D002979 1.8e-28 129.8 94 69.1
SEGI_14690 Sequoiadendron giganteum HOM05D002588 ORTHO05D027846 9.1e-28 127.5 121 52.9
BolC6t38333H Brassica oleracea HOM05D002588 ORTHO05D032163 1.6e-27 126.7 100 64.0
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 2.7e-27 125.9 129 52.7
AagrBONN_evm.TU.Sc2ySwM_368.1805 Anthoceros agrestis HOM05D002588 ORTHO05D002979 1.1e-25 120.6 154 40.9
Pp3c20_16320 Physcomitrium patens HOM05D002588 ORTHO05D002979 1.5e-25 120.2 163 42.3
HanXRQChr15g0492561 Helianthus annuus HOM05D002588 ORTHO05D002979 1.2e-24 117.1 89 66.3
A07p28520 Brassica napus HOM05D002588 ORTHO05D027846 4.7e-24 115.2 121 54.5
SMO200G0019 Selaginella moellendorffii HOM05D002588 ORTHO05D002979 1.8e-23 113.2 152 39.5
CBR_g29610 Chara braunii HOM05D002588 ORTHO05D002979 2.2e-21 106.3 156 39.7
RcHm_v2.0_Chr6g0264761 Rosa chinensis HOM05D002588 ORTHO05D002979 1.2e-19 100.5 68 77.9
Gohir.A01G102600 Gossypium hirsutum HOM05D002588 ORTHO05D002979 5.4e-12 75.1 58 60.3
BraA07t30490Z Brassica rapa HOM05D002588 ORTHO05D027846 3.5e-11 72.4 82 53.7


User provided reference genes

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