Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.3e-123 446.4 225 100.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.2e-89 333.6 207 77.8
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.2e-86 323.6 215 75.3
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 5.4e-82 308.1 221 70.1
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 4.6e-81 305.1 214 69.6
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.0e-81 304.7 204 79.9
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 6.0e-81 304.7 223 69.1
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 7.8e-81 304.3 222 69.4
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 7.8e-81 304.3 219 68.9
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.0e-80 303.9 224 69.2
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.0e-80 303.9 215 68.8
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.3e-80 302.8 214 69.2
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.3e-80 302.8 218 68.8
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 8.6e-80 300.8 214 68.2
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-79 300.4 221 68.3
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 1.1e-79 300.4 221 68.3
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.1e-79 300.4 214 69.6
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 3.3e-79 298.9 214 68.7
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.2e-78 297.0 211 67.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.6e-78 296.6 218 67.0
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.1e-78 296.2 227 65.2
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.8e-78 295.8 214 68.2
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 3.6e-78 295.4 222 66.7
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 4.7e-78 295.0 222 67.1
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 6.2e-78 294.7 220 67.7
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 8.1e-78 294.3 227 64.8
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 8.1e-78 294.3 223 65.5
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.1e-77 293.9 214 66.8
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.1e-77 293.9 214 67.8
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.4e-77 293.5 227 63.9
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.4e-77 293.5 214 68.7
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.4e-77 293.5 221 67.4
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.3e-77 292.7 214 66.8
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 4.0e-77 292.0 214 66.8
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 5.2e-77 291.6 214 67.8
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 5.2e-77 291.6 213 68.1
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 6.8e-77 291.2 214 66.8
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 6.8e-77 291.2 214 66.8
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 6.8e-77 291.2 214 66.8
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 6.8e-77 291.2 227 63.4
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 1.5e-76 290.0 214 66.4
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.5e-76 290.0 214 66.4
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.0e-76 289.7 214 66.4
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.0e-76 289.7 214 66.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 2.6e-76 289.3 214 66.8
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 3.4e-76 288.9 214 66.8
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 3.4e-76 288.9 213 67.6
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 3.4e-76 288.9 214 66.8
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 4.4e-76 288.5 218 65.6
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 5.8e-76 288.1 214 65.9
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 7.6e-76 287.7 214 66.8
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 7.6e-76 287.7 227 62.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 7.6e-76 287.7 227 62.6
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.9e-76 287.3 215 65.1
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.7e-75 286.6 214 66.4
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 2.4e-74 282.7 218 65.6
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 2.1e-73 279.6 216 62.0
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 3.5e-73 278.9 214 61.7
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 3.5e-73 278.9 214 64.5
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.6e-73 278.5 212 65.6
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-72 276.9 207 64.7
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-72 276.6 217 62.2
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 2.3e-72 276.2 214 60.7
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 3.9e-72 275.4 219 63.0
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.9e-72 275.4 217 63.6
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 5.1e-72 275.0 212 62.3
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 8.6e-72 274.2 214 63.1
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 8.6e-72 274.2 189 72.5
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.1e-71 273.9 214 63.1
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.1e-71 273.9 203 67.5
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.9e-71 273.1 214 63.6
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-71 273.1 215 62.8
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.9e-71 273.1 214 62.1
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.5e-71 272.7 214 63.6
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.3e-71 272.3 215 62.3
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 5.6e-71 271.6 214 63.1
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 5.6e-71 271.6 214 62.1
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 3.6e-70 268.9 214 61.7
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 4.7e-70 268.5 214 61.2
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 6.2e-70 268.1 211 60.2
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 6.2e-70 268.1 220 60.0
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 1.4e-69 266.9 214 62.1
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.8e-69 266.5 214 60.7
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.8e-69 266.5 214 62.1
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.8e-69 266.5 214 62.1
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 5.2e-69 265.0 201 64.7
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 2.0e-68 263.1 213 60.6
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 4.4e-68 261.9 212 59.4
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 5.8e-68 261.5 214 59.8
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 9.9e-68 260.8 212 61.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 9.9e-68 260.8 211 59.2
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.3e-67 260.4 211 60.7
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-67 259.2 207 62.3
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 2.9e-67 259.2 217 58.5
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 1.4e-66 256.9 214 58.9
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.2e-66 255.8 211 59.2
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 5.4e-66 255.0 211 59.7
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 2.7e-65 252.7 212 56.1
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-65 252.3 207 61.4
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 7.3e-63 244.6 212 57.5
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.4e-61 240.4 223 54.7
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 5.3e-61 238.4 194 59.3
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 6.9e-61 238.0 198 57.6
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 6.9e-61 238.0 212 54.2
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.6e-60 236.1 213 54.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.3e-59 233.8 213 53.1
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 5.1e-56 221.9 197 55.8
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.3e-55 218.8 215 56.3
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.4e-50 203.8 198 51.5
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 4.6e-49 198.7 218 47.2
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.1e-47 194.1 154 63.6
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.8e-38 162.2 157 56.1
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 4.3e-31 139.0 100 67.0
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 2.1e-25 120.2 70 78.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.0e-24 116.3 72 79.2
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 8.8e-24 114.8 220 33.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.5e-20 104.0 80 60.0
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.5e-19 98.6 70 61.4
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 3.7e-14 82.8 211 31.3
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.3e-13 79.0 57 64.9
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 8.5e-11 71.6 201 28.4


User provided reference genes

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