Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 4.1e-309 1063.9 543 100.0
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 1.0e-182 644.0 520 64.6
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 1.9e-181 639.8 535 62.6
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 2.0e-178 629.8 534 61.2
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 5.3e-176 621.7 535 61.5
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 5.3e-176 621.7 535 61.5
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 2.2e-174 616.3 523 61.4
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 8.5e-174 614.4 523 61.2
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 9.4e-173 610.9 541 59.1
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 1.8e-171 606.7 534 59.4
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 1.8e-171 606.7 533 59.5
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.1e-170 604.0 519 60.9
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 9.7e-170 600.9 535 59.4
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 3.7e-169 599.0 519 60.7
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 6.3e-169 598.2 534 58.1
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 1.1e-168 597.4 540 58.3
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 4.1e-168 595.5 533 58.7
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 9.1e-168 594.3 534 58.2
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 1.3e-166 590.5 532 59.4
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 6.5e-166 588.2 538 57.6
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 5.5e-165 585.1 522 58.8
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 2.7e-164 582.8 538 58.2
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 6.1e-164 581.6 534 58.8
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 1.0e-163 580.9 534 57.7
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 1.4e-163 580.5 536 57.6
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 1.8e-163 580.1 538 56.3
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 4.0e-163 578.9 535 58.1
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 5.7e-162 575.1 522 58.2
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 5.7e-162 575.1 518 58.9
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 7.5e-162 574.7 543 56.9
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 1.3e-161 573.9 533 58.0
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 1.7e-161 573.5 516 59.3
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 3.7e-161 572.4 522 57.1
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 6.3e-161 571.6 538 57.2
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 1.4e-160 570.5 532 56.8
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 7.0e-160 568.2 522 56.5
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 9.1e-160 567.8 535 55.0
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 1.6e-159 567.0 538 54.8
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 2.7e-159 566.2 524 56.7
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 3.5e-159 565.8 538 56.7
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 5.9e-159 565.1 528 56.4
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 7.7e-159 564.7 536 56.3
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 7.7e-159 564.7 538 56.7
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 1.0e-158 564.3 497 57.9
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 1.0e-158 564.3 526 56.8
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 1.0e-158 564.3 532 57.9
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 2.9e-158 562.8 518 57.3
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 1.1e-157 560.8 533 55.9
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 1.5e-157 560.5 536 55.6
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 3.2e-157 559.3 536 54.1
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 4.2e-157 558.9 536 55.0
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 7.2e-157 558.1 533 57.2
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 9.4e-157 557.8 535 54.2
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 1.2e-156 557.4 534 53.9
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.4e-155 553.9 528 57.0
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 1.8e-155 553.5 532 57.0
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 2.3e-155 553.1 531 56.5
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 3.0e-155 552.7 576 53.8
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 5.2e-155 552.0 514 56.4
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 6.8e-155 551.6 522 55.4
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 8.8e-155 551.2 532 57.0
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 1.5e-154 550.4 515 57.7
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 2.0e-154 550.1 575 53.7
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 2.6e-154 549.7 575 53.6
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 1.7e-153 547.0 533 55.3
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 2.8e-153 546.2 533 54.0
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 3.7e-153 545.8 532 55.8
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 1.4e-152 543.9 510 56.5
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 1.4e-152 543.9 502 57.2
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 1.4e-152 543.9 518 55.4
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 7.7e-151 538.1 530 53.6
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 1.0e-150 537.7 545 54.7
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 3.8e-150 535.8 546 54.4
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 1.1e-149 534.3 533 54.6
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 5.5e-149 531.9 534 54.1
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 1.2e-148 530.8 531 52.9
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 3.6e-148 529.3 531 52.9
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 2.3e-147 526.6 532 53.0
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 3.0e-147 526.2 548 52.4
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 1.5e-146 523.9 532 53.0
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.4e-146 522.7 491 57.2
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 4.4e-146 522.3 529 53.9
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.4e-146 522.3 576 52.3
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 5.7e-146 521.9 532 52.6
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.9e-145 519.6 576 52.3
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.4e-144 517.3 576 52.1
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.2e-144 516.2 576 52.1
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 5.4e-144 515.4 528 52.5
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 9.2e-144 514.6 536 54.1
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 9.2e-144 514.6 524 54.4
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 4.6e-143 512.3 534 53.0
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 3.9e-142 509.2 545 53.2
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.9e-141 506.9 577 51.6
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 4.3e-141 505.8 537 52.0
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 3.6e-140 502.7 525 52.0
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 4.7e-140 502.3 531 51.2
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 3.1e-139 499.6 519 52.8
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 3.3e-133 479.6 421 59.9
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 2.5e-125 453.4 529 49.3
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 7.3e-125 451.8 530 48.7
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 8.4e-121 438.3 555 43.1
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 1.9e-120 437.2 419 55.6
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 1.2e-116 424.5 533 46.5
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 6.8e-115 418.7 394 56.6
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 1.2e-114 417.9 410 53.4
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 2.0e-114 417.2 546 44.7
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 2.3e-110 403.7 482 48.1
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 1.3e-102 377.9 457 46.8
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 4.3e-101 372.9 332 56.6
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 6.2e-100 369.0 339 57.5
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 3.9e-94 349.7 495 38.8
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 4.3e-93 346.3 427 48.2
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 1.3e-92 344.7 314 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 1.4e-91 341.3 476 40.8
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 1.8e-91 340.9 564 36.9
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 3.5e-87 326.6 535 39.4
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 1.0e-86 325.1 315 56.2
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 2.2e-81 307.4 480 38.8
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 1.0e-78 298.5 426 43.0
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 7.2e-72 275.8 260 55.8
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 4.6e-71 273.1 497 37.2
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 1.4e-70 271.6 497 37.2
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 3.7e-60 236.9 325 43.4
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 1.4e-54 218.4 261 47.5
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 6.3e-52 209.5 197 56.3
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 3.1e-51 207.2 197 55.8
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.6e-47 193.7 213 49.8
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 1.2e-34 152.1 587 23.7
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 4.3e-32 143.7 100 75.0
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 1.0e-30 139.0 154 51.3
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 5.7e-29 133.3 189 43.4
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 8.3e-28 129.4 107 62.6
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 7.8e-26 122.9 496 26.4
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 3.0e-25 120.9 451 28.2
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 1.9e-24 118.2 103 58.3
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 5.6e-24 116.7 89 66.3
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 6.8e-22 109.8 110 55.5
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 1.1e-19 102.4 90 61.1
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 1.4e-19 102.1 111 54.1
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.4e-19 101.3 102 54.9
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 6.0e-18 96.7 479 23.2
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 6.6e-17 93.2 109 48.6
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 2.3e-14 84.7 94 51.1
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 4.0e-14 84.0 101 47.5
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 2.5e-08 64.7 93 36.6
Cre07.g355200 Chlamydomonas reinhardtii HOM05D001925 ORTHO05D005701 1.2e-07 62.4 437 22.0


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