Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 5.4e-184 647.5 323 100.0
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 9.7e-109 397.5 313 61.7
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 3.8e-105 385.6 316 60.8
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.4e-99 367.1 310 56.8
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 5.3e-99 365.2 305 57.7
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.8e-94 350.1 302 54.0
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 6.8e-94 348.2 304 55.3
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 8.8e-94 347.8 306 55.6
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.5e-93 347.1 311 53.7
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 1.5e-93 347.1 314 54.5
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 4.4e-93 345.5 303 53.8
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 6.3e-92 341.7 304 53.6
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.4e-91 340.5 302 52.6
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 2.7e-90 336.3 311 54.0
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 2.3e-89 333.2 309 53.4
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.3e-89 333.2 305 53.4
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 3.8e-89 332.4 275 57.5
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 5.0e-89 332.0 302 52.3
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 5.0e-89 332.0 312 52.9
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 6.5e-89 331.6 313 52.7
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 2.5e-88 329.7 296 52.4
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.5e-88 329.7 302 52.3
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 3.2e-88 329.3 302 52.3
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 9.5e-88 327.8 295 52.5
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 2.1e-87 326.6 313 51.8
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.8e-87 326.2 305 52.8
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 4.7e-87 325.5 309 51.1
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 8.0e-87 324.7 315 51.1
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 2.3e-86 323.2 315 50.2
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 5.2e-86 322.0 295 51.5
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 5.2e-86 322.0 316 51.6
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 6.8e-86 321.6 297 52.9
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 6.8e-86 321.6 308 52.3
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 8.9e-86 321.2 311 51.8
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 8.9e-86 321.2 308 52.3
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 1.2e-85 320.9 318 50.3
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 3.4e-85 319.3 295 51.2
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.4e-85 318.9 310 50.0
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 5.7e-85 318.5 316 51.3
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 5.7e-85 318.5 313 50.8
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 1.3e-84 317.4 309 49.8
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.1e-83 314.3 308 49.7
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.1e-83 314.3 307 50.2
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 2.4e-83 313.2 295 50.2
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 4.1e-83 312.4 303 51.5
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 5.4e-83 312.0 314 49.4
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 1.2e-82 310.8 307 50.5
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.2e-82 310.8 312 51.6
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 2.0e-82 310.1 316 51.3
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 7.8e-82 308.1 311 49.5
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 7.8e-82 308.1 307 48.9
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 1.0e-81 307.8 312 48.7
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 1.0e-81 307.8 315 48.3
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 2.3e-81 306.6 290 52.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 2.9e-81 306.2 309 48.5
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 3.8e-81 305.8 313 49.5
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 5.0e-81 305.4 311 47.9
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 6.6e-81 305.1 310 49.7
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.5e-80 303.1 312 47.8
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 7.3e-80 301.6 314 48.1
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 8.0e-79 298.1 309 48.2
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.0e-78 297.7 312 47.8
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.4e-78 297.4 240 60.8
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 1.4e-78 297.4 318 48.4
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 4.4e-77 292.4 304 48.7
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 9.8e-77 291.2 304 49.3
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 3.2e-75 286.2 302 46.7
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.6e-74 283.9 317 47.0
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 3.5e-74 282.7 308 45.8
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 6.0e-74 282.0 363 43.3
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.3e-73 280.8 301 47.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.7e-73 280.4 238 56.3
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 2.3e-73 280.0 291 46.0
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 2.3e-73 280.0 310 44.8
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 3.9e-73 279.3 329 45.3
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 3.9e-73 279.3 267 53.6
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 5.0e-73 278.9 300 46.3
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 6.6e-73 278.5 323 45.5
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.5e-72 277.3 300 46.3
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.9e-72 276.9 318 45.6
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 5.6e-72 275.4 327 45.3
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.1e-70 271.2 287 47.7
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 1.1e-70 271.2 300 46.0
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 2.3e-70 270.0 322 44.4
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 3.4e-69 266.2 287 47.4
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 4.4e-69 265.8 300 44.7
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 4.4e-69 265.8 254 50.0
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 5.8e-69 265.4 300 44.3
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 5.8e-69 265.4 316 43.7
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 7.5e-69 265.0 300 44.0
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 7.5e-69 265.0 319 44.5
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 9.8e-69 264.6 300 44.7
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.7e-68 263.8 300 44.7
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 2.9e-68 263.1 287 46.7
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.4e-67 260.0 332 42.8
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 3.0e-65 253.1 338 41.4
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 6.6e-65 251.9 308 42.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 5.6e-64 248.8 288 45.5
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.2e-63 247.7 315 41.0
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.7e-60 237.3 297 43.8
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 4.1e-51 206.1 322 40.1
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 7.8e-50 201.8 191 51.8
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.3e-49 200.3 322 39.8
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.1e-48 198.0 332 38.9
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.6e-47 194.1 221 44.8
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.6e-47 194.1 329 37.7
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 1.8e-46 190.7 177 52.0
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.7e-41 174.1 247 38.1
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.6e-40 168.3 212 43.4
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 1.3e-39 167.9 202 40.6
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 3.1e-38 163.3 208 41.8
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.0e-38 162.9 215 41.9
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.8e-37 159.1 207 40.6
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.9e-36 156.8 230 36.5
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.9e-36 156.0 237 36.3
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.4e-36 155.2 237 36.7
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.3e-35 151.8 209 36.8
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.7e-34 150.2 243 37.4
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-27 127.9 152 41.4
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.9e-27 127.5 189 37.6
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 2.3e-25 120.6 119 47.9
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 3.9e-25 119.8 165 38.8
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 5.8e-21 105.9 116 46.6
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 3.2e-19 100.1 138 44.9
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 9.3e-19 98.6 80 60.0
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.3e-07 61.6 80 41.2


User provided reference genes

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