Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 8.8e-215 750.0 369 100.0
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 9.2e-188 660.2 382 88.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 1.7e-162 576.2 368 76.9
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 5.3e-159 564.7 371 75.5
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 8.4e-157 557.4 368 73.9
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 3.0e-154 548.9 376 72.3
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 3.9e-154 548.5 372 73.4
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 6.6e-154 547.7 369 76.2
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 9.6e-153 543.9 370 74.3
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 9.6e-153 543.9 369 74.3
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 9.6e-153 543.9 370 75.4
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 9.6e-153 543.9 369 74.5
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.3e-152 543.5 372 73.4
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 2.1e-152 542.7 369 73.2
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 2.1e-152 542.7 369 74.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 8.1e-152 540.8 370 73.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.1e-151 540.4 369 71.8
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 1.4e-151 540.0 369 73.4
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.8e-151 539.7 378 71.2
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 2.4e-151 539.3 368 71.7
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 1.5e-150 536.6 370 74.1
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 7.6e-150 534.3 377 71.9
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 9.9e-150 533.9 370 73.2
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.3e-149 533.5 368 71.2
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 1.7e-149 533.1 368 71.5
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 2.9e-149 532.3 381 71.4
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 3.8e-149 531.9 360 73.9
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.9e-149 531.6 370 73.8
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 8.4e-149 530.8 368 71.2
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 8.4e-149 530.8 318 80.5
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.1e-148 530.4 368 73.1
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.9e-148 529.6 368 72.6
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.9e-148 529.6 368 71.5
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.4e-148 529.3 319 79.9
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 2.4e-148 529.3 370 72.7
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 3.2e-148 528.9 354 73.2
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 7.1e-148 527.7 318 80.2
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.2e-147 526.9 376 69.4
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.1e-147 526.2 372 69.4
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 2.7e-147 525.8 363 71.6
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 3.5e-147 525.4 324 76.9
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 3.5e-147 525.4 359 71.6
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 4.6e-147 525.0 359 71.6
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 6.0e-147 524.6 340 74.1
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 7.9e-147 524.2 368 71.2
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 1.0e-146 523.9 322 79.2
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 1.0e-146 523.9 348 74.7
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.0e-146 523.9 319 79.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 1.3e-146 523.5 362 71.3
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 1.3e-146 523.5 362 71.3
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.3e-146 523.5 377 70.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.3e-146 523.5 343 77.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.8e-146 523.1 368 72.0
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.8e-146 523.1 370 71.6
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 2.3e-146 522.7 375 69.1
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 2.3e-146 522.7 370 71.6
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.0e-146 522.3 312 80.4
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.0e-146 522.3 307 81.8
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 3.0e-146 522.3 368 71.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.9e-146 521.9 368 72.0
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 6.7e-146 521.2 307 81.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.7e-146 521.2 307 81.4
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 6.7e-146 521.2 307 81.8
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 8.7e-146 520.8 305 81.0
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-145 520.4 368 71.7
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-145 520.4 370 71.4
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.9e-145 519.6 371 67.9
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 1.9e-145 519.6 382 68.8
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.9e-145 519.6 370 72.4
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.5e-145 519.2 305 80.0
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 2.5e-145 519.2 368 71.7
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 3.3e-145 518.8 305 79.7
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.3e-145 518.8 305 79.7
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 4.3e-145 518.5 305 79.7
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 4.3e-145 518.5 305 79.7
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 4.3e-145 518.5 370 69.2
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 5.6e-145 518.1 370 71.1
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.6e-144 516.5 370 70.0
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 2.8e-144 515.8 305 79.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 3.7e-144 515.4 372 70.2
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.7e-144 515.4 304 79.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 4.8e-144 515.0 305 79.3
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 4.8e-144 515.0 305 79.3
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 4.0e-143 511.9 365 71.2
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 4.0e-143 511.9 369 69.9
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 6.9e-143 511.1 321 76.0
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 5.8e-142 508.1 306 77.8
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 7.6e-142 507.7 300 80.7
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 7.6e-142 507.7 319 78.4
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 1.3e-141 506.9 372 67.5
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 2.9e-141 505.8 308 77.6
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 8.4e-141 504.2 420 63.8
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.5e-140 502.7 317 74.8
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.3e-138 496.1 298 80.2
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 5.6e-137 491.5 347 68.6
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 6.9e-135 484.6 368 68.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.1e-132 477.2 369 65.9
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-131 473.8 341 70.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 4.6e-131 471.9 372 67.7
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 9.7e-129 464.2 305 73.1
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 2.5e-124 449.5 406 59.4
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.6e-123 446.8 318 69.8
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.0e-121 439.9 311 72.3
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 9.7e-121 437.6 358 62.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 6.3e-120 434.9 303 67.3
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 2.4e-119 433.0 361 61.5
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.1e-115 419.9 367 57.8
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 3.3e-113 412.5 307 63.5
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 1.8e-106 390.2 324 63.0
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 5.7e-105 385.2 301 65.8
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 7.4e-105 384.8 280 71.8
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 7.0e-79 298.5 266 54.5
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.0e-78 297.0 288 51.0
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 1.5e-76 290.8 288 51.0
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.9e-76 290.4 248 63.7
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.8e-74 283.9 190 72.6
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 2.7e-62 243.4 181 70.2
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.3e-47 191.8 132 68.2
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 1.6e-43 181.0 114 80.7
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.1e-42 178.3 111 72.1
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.2e-31 140.2 102 66.7
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.3e-26 122.9 131 51.9
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 4.2e-23 113.2 128 54.7
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.4e-18 98.2 158 40.5
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.1e-18 97.1 106 50.9
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.6e-17 94.0 96 52.1
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 7.2e-07 59.3 28 85.7


User provided reference genes

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