Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0657 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 2.8e-61 238.4 118 100.0
vmacro22887 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.6e-35 152.1 114 64.0
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 4.4e-35 151.4 98 68.4
Nn3g16664 Nelumbo nucifera HOM05D002957 ORTHO05D007941 1.3e-34 149.8 108 63.9
RcHm_v2.0_Chr7g0192141 Rosa chinensis HOM05D002957 ORTHO05D007941 3.8e-34 148.3 108 63.9
Duzib084G0342 Durio zibethinus HOM05D002957 ORTHO05D007941 1.4e-33 146.4 97 64.9
Rhsim12G0169500 Rhododendron simsii HOM05D002957 ORTHO05D007941 1.4e-33 146.4 107 60.7
CANSAT80G1905 Cannabis sativa HOM05D002957 ORTHO05D007941 1.9e-33 146.0 107 58.9
TAR622G0090 Trochodendron aralioides HOM05D002957 ORTHO05D007941 2.4e-33 145.6 106 61.3
Dinv38506 Davidia involucrata HOM05D002957 ORTHO05D007941 5.4e-33 144.4 107 60.7
QL10p006228 Quercus lobata HOM05D002957 ORTHO05D007941 5.4e-33 144.4 95 65.3
TPR.G35599 Trifolium pratense HOM05D002957 ORTHO05D007941 5.4e-33 144.4 97 64.9
Psat5g117640 Pisum sativum HOM05D002957 ORTHO05D007941 9.2e-33 143.7 101 61.4
GSVIVG01007604001 Vitis vinifera HOM05D002957 ORTHO05D007941 9.2e-33 143.7 103 63.1
Atru.chr9.2618 Acer truncatum HOM05D002957 ORTHO05D007941 1.2e-32 143.3 98 62.2
Thecc.03G117300 Theobroma cacao HOM05D002957 ORTHO05D007941 1.6e-32 142.9 97 63.9
Manes.06G111900 Manihot esculenta HOM05D002957 ORTHO05D007941 2.7e-32 142.1 103 57.3
Actinidia36761 Actinidia chinensis HOM05D002957 ORTHO05D007941 3.5e-32 141.7 98 62.2
FvH4_5g06601 Fragaria vesca HOM05D002957 ORTHO05D007941 4.6e-32 141.4 101 63.4
FAN18G4082 Fragaria x ananassa HOM05D000025 ORTHO05D007941 4.6e-32 141.4 101 63.4
Cfa019259 Carpinus fangiana HOM05D002957 ORTHO05D007941 6.0e-32 141.0 98 62.2
Hma1.2p1_1092F.1_g255870 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 6.0e-32 141.0 97 60.8
Hma1.2p1_1092F.1_g255880 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 6.0e-32 141.0 97 60.8
Medtr3g075540 Medicago truncatula HOM05D002957 ORTHO05D007941 6.0e-32 141.0 92 66.3
CiPaw.11G016500 Carya illinoinensis HOM05D002957 ORTHO05D007941 7.8e-32 140.6 97 63.9
Potri.015G086100 Populus trichocarpa HOM05D002957 ORTHO05D007941 7.8e-32 140.6 113 55.8
QL03p060389 Quercus lobata HOM05D002957 ORTHO05D007941 7.8e-32 140.6 95 64.2
Gohir.A12G185900 Gossypium hirsutum HOM05D002957 ORTHO05D007941 1.0e-31 140.2 97 61.9
MD06G1224500 Malus domestica HOM05D002957 ORTHO05D007941 1.0e-31 140.2 113 56.6
Thhalv10025885m.g Eutrema salsugineum HOM05D002957 ORTHO05D007941 1.3e-31 139.8 97 63.9
Eucgr.B00193 Eucalyptus grandis HOM05D002957 ORTHO05D007941 1.7e-31 139.4 101 61.4
FAN08G0527 Fragaria x ananassa HOM05D002957 ORTHO05D007941 1.7e-31 139.4 101 62.4
Gohir.D12G188700 Gossypium hirsutum HOM05D002957 ORTHO05D007941 1.7e-31 139.4 97 61.9
Gorai.008G202600 Gossypium raimondii HOM05D002957 ORTHO05D007941 1.7e-31 139.4 97 61.9
CSS0023443 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 2.3e-31 139.0 113 54.9
Sabra15G0109000 Salix brachista HOM05D002957 ORTHO05D007941 3.0e-31 138.7 113 54.9
CSS0001501 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 3.9e-31 138.3 113 54.9
ClCG06G017470 Citrullus lanatus HOM05D002957 ORTHO05D007941 3.9e-31 138.3 97 59.8
Ciclev10021427m.g Citrus clementina HOM05D002957 ORTHO05D007941 3.9e-31 138.3 97 61.9
MELO3C026250.2 Cucumis melo HOM05D002957 ORTHO05D007941 3.9e-31 138.3 103 57.3
BcaC09g50835 Brassica carinata HOM05D002957 ORTHO05D007941 5.1e-31 137.9 97 62.9
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.1e-31 137.9 97 62.9
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 5.1e-31 137.9 97 62.9
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 5.1e-31 137.9 97 62.9
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 5.1e-31 137.9 97 62.9
Sed0027100 Sechium edule HOM05D002957 ORTHO05D007941 5.1e-31 137.9 97 59.8
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 6.6e-31 137.5 98 60.2
Lsat_1_v5_gn_1_28561 Lactuca sativa HOM05D002957 ORTHO05D007941 6.6e-31 137.5 97 59.8
Lj5A132G82 Lonicera japonica HOM05D002957 ORTHO05D007941 6.6e-31 137.5 95 63.2
PSO063G7275 Papaver somniferum HOM05D002957 ORTHO05D007941 6.6e-31 137.5 103 61.2
PSO210G3123 Papaver somniferum HOM05D002957 ORTHO05D007941 6.6e-31 137.5 103 61.2
CsaV3_1G000990 Cucumis sativus L. HOM05D002957 ORTHO05D007941 8.6e-31 137.1 97 58.8
DCAR_026193 Daucus carota HOM05D002957 ORTHO05D007941 1.1e-30 136.7 102 56.9
HanXRQChr02g0035391 Helianthus annuus HOM05D002957 ORTHO05D007941 1.9e-30 136.0 97 60.8
Sp7g22730 Schrenkiella parvula HOM05D002957 ORTHO05D007941 1.9e-30 136.0 97 61.9
AL7G28440 Arabidopsis lyrata HOM05D002957 ORTHO05D007941 2.5e-30 135.6 97 60.8
arahy.Tifrunner.gnm1.ann1.0G1QRI Arachis hypogaea HOM05D002957 ORTHO05D007941 2.5e-30 135.6 97 59.8
Oeu063270.2 Olea europaea HOM05D002957 ORTHO05D007941 2.5e-30 135.6 100 57.0
Prupe.5G163400 Prunus persica HOM05D002957 ORTHO05D007941 2.5e-30 135.6 107 57.0
Lalb_Chr11g0069861 Lupinus albus HOM05D002957 ORTHO05D007941 3.3e-30 135.2 97 59.8
Ah.08g218480 Amaranthus hybridus HOM05D002957 ORTHO05D007941 4.3e-30 134.8 95 62.1
CARHR232120 Cardamine hirsuta HOM05D002957 ORTHO05D007941 4.3e-30 134.8 109 55.0
AUR62022097 Chenopodium quinoa HOM05D002957 ORTHO05D007941 4.3e-30 134.8 90 63.3
PGR083G0505 Punica granatum HOM05D002957 ORTHO05D007941 4.3e-30 134.8 97 59.8
Aa31LG7G11100 Aethionema arabicum HOM05D002957 ORTHO05D007941 5.6e-30 134.4 104 58.7
Carub.0007s1631 Capsella rubella HOM05D002957 ORTHO05D007941 5.6e-30 134.4 97 60.8
Lj1g0012275 Lotus japonicus HOM05D002957 ORTHO05D007941 5.6e-30 134.4 97 59.8
Sopen12g011690 Solanum pennellii HOM05D002957 ORTHO05D007941 5.6e-30 134.4 97 63.9
AT4G24750 Arabidopsis thaliana HOM05D002957 ORTHO05D007941 9.6e-30 133.7 97 58.8
Solyc12g021340.3 Solanum lycopersicum HOM05D002957 ORTHO05D007941 9.6e-30 133.7 103 63.1
Aqoxy5G03698 Aquilegia oxysepala HOM05D002957 ORTHO05D007941 1.2e-29 133.3 109 55.0
Nitab4.5_0000025g0240 Nicotiana tabacum HOM05D002957 ORTHO05D007941 1.2e-29 133.3 91 64.8
Lj1g0016898 Lotus japonicus HOM05D002957 ORTHO05D007941 1.6e-29 132.9 97 58.8
Phvul.009G171900 Phaseolus vulgaris HOM05D002957 ORTHO05D007941 1.6e-29 132.9 101 55.4
SalBow5G1405 Salvia bowleyana HOM05D002957 ORTHO05D007941 1.6e-29 132.9 95 61.1
arahy.Tifrunner.gnm1.ann1.DF1MTK Arachis hypogaea HOM05D002957 ORTHO05D007941 2.1e-29 132.5 97 59.8
Cc04_g11180 Coffea canephora HOM05D002957 ORTHO05D007941 2.1e-29 132.5 97 60.8
Migut.O00181 Erythranthe guttata HOM05D002957 ORTHO05D007941 2.1e-29 132.5 91 61.5
Glyma.06G175800 Glycine max HOM05D002957 ORTHO05D007941 2.8e-29 132.1 101 55.4
Peaxi162Scf00801g00733 Petunia axillaris HOM05D002957 ORTHO05D007941 3.6e-29 131.7 100 59.0
EL10Ac7g18022 Beta vulgaris HOM05D002957 ORTHO05D007941 6.2e-29 131.0 105 57.1
Nitab4.5_0001377g0020 Nicotiana tabacum HOM05D002957 ORTHO05D007941 6.2e-29 131.0 91 63.7
SGA_v2.0_scaffold90G27815 Striga asiatica HOM05D002957 ORTHO05D007941 6.2e-29 131.0 95 60.0
VMungo1309G1657 Vigna mungo HOM05D002957 ORTHO05D007941 6.2e-29 131.0 101 54.5
Sc04g0001210 Simmondsia chinensis HOM05D002957 ORTHO05D007941 1.2e-27 126.7 107 52.3
Zm00001eb246160 Zea mays HOM05D002957 ORTHO05D007941 1.2e-27 126.7 91 60.4
Os02g0596000 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D007941 3.4e-27 125.2 90 58.9
Sc04g0001230 Simmondsia chinensis HOM05D002957 ORTHO05D007941 1.7e-26 122.9 93 57.0
unitig_8.g3070 Utricularia gibba HOM05D002957 ORTHO05D007941 1.4e-25 119.8 97 55.7
THA.LOC104809647 Tarenaya hassleriana HOM05D002957 ORTHO05D007941 5.4e-25 117.9 95 55.8
SMO364G0570 Selaginella moellendorffii HOM05D002957 ORTHO05D007941 2.1e-24 115.9 87 57.5
RcHm_v2.0_Chr1g0313851 Rosa chinensis HOM05D002957 ORTHO05D007941 1.0e-23 113.6 95 57.9
RcHm_v2.0_Chr2g0119491 Rosa chinensis HOM05D002957 ORTHO05D007941 1.0e-23 113.6 95 57.9
Haze_07617 Corylus avellana HOM05D002957 ORTHO05D007941 3.9e-23 111.7 161 38.5
ATR0199G004 Amborella trichopoda HOM05D002957 ORTHO05D007941 1.5e-22 109.8 129 45.0
CBR_g34898 Chara braunii HOM05D002957 ORTHO05D007941 1.9e-22 109.4 84 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1972 Anthoceros agrestis HOM05D002957 ORTHO05D007941 7.3e-22 107.5 107 47.7
Dinv11133 Davidia involucrata HOM05D002957 ORTHO05D007941 2.8e-21 105.5 69 65.2
Mapoly0042s0113 Marchantia polymorpha HOM05D002957 ORTHO05D007941 3.6e-21 105.1 84 54.8
Cpa.g.sc159.6 Carica papaya HOM05D002957 ORTHO05D007941 1.2e-19 100.1 97 54.6
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.6e-19 99.0 70 65.7
MD14G1168400 Malus domestica HOM05D002957 ORTHO05D007941 1.7e-18 96.3 112 44.6
Pp3c6_20980 Physcomitrium patens HOM05D002957 ORTHO05D007941 2.9e-18 95.5 90 50.0
MBI10_g44128_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D007941 6.4e-18 94.4 75 64.0
DCAR_011893 Daucus carota HOM05D002957 ORTHO05D007941 1.4e-17 93.2 61 60.7
COL.COLO4_37865 Corchorus olitorius HOM05D002957 ORTHO05D007941 5.4e-17 91.3 55 76.4
Pp3c7_15530 Physcomitrium patens HOM05D002957 ORTHO05D007941 7.9e-16 87.4 85 44.7
CAN.G59.20 Capsicum annuum HOM05D002957 ORTHO05D007941 4.5e-11 71.6 46 63.0
Eucgr.B00189 Eucalyptus grandis HOM05D002957 ORTHO05D007941 4.5e-11 71.6 101 36.6
TWI39G0012 Tripterygium wilfordii HOM05D002957 ORTHO05D007941 2.9e-10 68.9 95 37.9
RcHm_v2.0_Chr3g0475211 Rosa chinensis HOM05D002957 ORTHO05D007941 5.5e-09 64.7 95 35.8
SalBow5G3338 Salvia bowleyana HOM05D002957 ORTHO05D007941 2.5e-06 55.8 95 32.6


User provided reference genes

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