Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 1.1e-184 649.8 320 100.0
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 5.1e-126 454.9 267 83.1
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 4.1e-51 206.1 340 39.7
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.5e-50 203.0 329 37.4
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 7.8e-50 201.8 329 37.4
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 5.6e-48 195.7 330 37.9
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.7e-47 192.6 341 34.9
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 1.4e-46 191.0 320 36.6
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 4.0e-46 189.5 319 38.6
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 1.2e-45 188.0 320 35.9
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.5e-45 187.6 327 37.3
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 2.6e-45 186.8 309 36.2
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 3.7e-44 183.0 315 38.4
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 2.4e-43 180.3 310 37.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 7.0e-43 178.7 313 37.1
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 9.2e-43 178.3 323 38.7
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 3.5e-42 176.4 318 35.8
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 4.6e-42 176.0 313 36.1
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 5.9e-42 175.6 313 36.7
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 5.9e-42 175.6 309 36.6
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 7.8e-42 175.3 315 35.9
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 2.3e-41 173.7 294 38.1
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 3.0e-41 173.3 299 36.8
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 6.6e-41 172.2 297 36.7
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 6.6e-41 172.2 303 36.6
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 9.5e-40 168.3 307 35.5
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 4.7e-39 166.0 331 33.2
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 6.2e-39 165.6 297 37.7
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 8.0e-39 165.2 315 35.6
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 3.1e-38 163.3 312 36.5
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 2.0e-37 160.6 319 34.2
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 2.0e-37 160.6 332 36.4
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 4.4e-37 159.5 301 35.5
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 4.4e-37 159.5 301 35.5
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 4.4e-37 159.5 337 31.2
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 7.5e-37 158.7 310 33.2
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 3.7e-36 156.4 300 35.3
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 4.9e-36 156.0 309 35.0
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 6.4e-36 155.6 300 33.3
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 6.4e-36 155.6 294 36.4
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.4e-35 154.5 299 35.5
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 1.9e-35 154.1 309 34.0
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 3.2e-35 153.3 313 31.9
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 7.0e-35 152.1 333 32.4
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.2e-35 151.8 313 34.5
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 9.2e-35 151.8 329 35.0
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 1.2e-34 151.4 305 33.4
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 1.2e-34 151.4 317 33.4
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 1.6e-34 151.0 322 32.9
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 2.0e-34 150.6 315 33.0
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.7e-34 150.2 313 34.5
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 3.5e-34 149.8 329 32.8
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 3.5e-34 149.8 307 32.9
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.5e-34 149.8 313 34.5
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.6e-34 149.4 311 34.1
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 4.6e-34 149.4 315 33.0
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 4.6e-34 149.4 317 35.3
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 1.0e-33 148.3 299 34.8
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.0e-33 148.3 299 32.4
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 1.0e-33 148.3 311 34.1
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.0e-33 148.3 316 33.2
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 1.3e-33 147.9 299 33.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 1.7e-33 147.5 312 33.0
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 1.7e-33 147.5 314 33.1
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 3.0e-33 146.7 305 32.8
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 5.0e-33 146.0 315 34.3
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 6.6e-33 145.6 323 31.0
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 8.6e-33 145.2 299 33.8
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-32 144.8 313 34.2
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 1.1e-32 144.8 320 32.2
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.3e-32 143.3 324 32.4
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 3.3e-32 143.3 320 31.9
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 4.3e-32 142.9 308 32.5
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 7.3e-32 142.1 295 35.9
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 7.3e-32 142.1 312 33.0
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 9.5e-32 141.7 318 33.6
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 9.5e-32 141.7 325 33.2
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 1.2e-31 141.4 312 31.1
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.2e-31 141.4 303 34.7
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 2.1e-31 140.6 329 33.1
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 2.1e-31 140.6 309 33.7
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 6.2e-31 139.0 315 30.2
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 1.4e-30 137.9 308 33.8
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.4e-30 137.9 188 39.9
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 3.1e-30 136.7 317 32.8
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 4.0e-30 136.3 314 32.5
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 4.0e-30 136.3 312 30.4
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 4.0e-30 136.3 302 33.8
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 5.2e-30 136.0 330 32.7
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 5.2e-30 136.0 308 31.2
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 6.8e-30 135.6 305 32.5
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 1.2e-29 134.8 295 33.9
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 1.5e-29 134.4 298 34.2
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 2.0e-29 134.0 322 32.0
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 2.6e-29 133.7 293 34.1
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 2.6e-29 133.7 308 34.4
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 4.4e-29 132.9 283 32.9
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.8e-29 132.5 287 33.1
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 9.9e-29 131.7 312 33.0
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 1.3e-28 131.3 232 35.8
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 1.3e-28 131.3 302 33.1
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 1.3e-28 131.3 307 31.9
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 2.2e-28 130.6 263 33.8
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 1.1e-27 128.3 298 31.2
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.4e-27 127.9 306 32.4
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 1.9e-27 127.5 281 34.5
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 4.1e-27 126.3 272 34.9
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 4.1e-27 126.3 318 33.3
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 4.1e-27 126.3 304 29.9
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 7.1e-27 125.6 293 31.7
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.2e-26 124.8 326 31.3
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 2.7e-26 123.6 312 31.7
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 2.7e-26 123.6 325 29.8
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 2.3e-25 120.6 332 29.8
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 3.0e-25 120.2 316 32.0
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 6.6e-25 119.0 300 31.0
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 1.1e-24 118.2 311 30.2
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 2.5e-24 117.1 301 29.9
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 4.3e-24 116.3 232 32.8
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 5.6e-24 115.9 261 31.4
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 2.1e-23 114.0 244 32.0
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 2.8e-23 113.6 293 32.4
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 2.8e-23 113.6 327 30.3
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 3.6e-23 113.2 298 30.5
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 3.6e-23 113.2 309 29.4
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 3.6e-23 113.2 279 31.2
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 8.1e-23 112.1 325 30.5
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 2.4e-22 110.5 312 30.4
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 4.0e-22 109.8 325 30.5
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 6.8e-22 109.0 308 31.8
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 8.9e-22 108.6 300 31.7
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 1.2e-21 108.2 309 31.1
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.5e-21 107.8 316 30.4
MBI17_g35262_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 2.0e-21 107.5 99 53.5
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 2.6e-21 107.1 125 40.8
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.3e-20 104.8 325 30.8
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 2.9e-20 103.6 329 26.4
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 2.9e-20 103.6 310 29.7
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 1.1e-19 101.7 96 49.0
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 1.1e-19 101.7 96 49.0
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 1.4e-19 101.3 314 29.0
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 2.4e-19 100.5 305 29.8
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 7.1e-19 99.0 142 37.3
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 7.1e-19 99.0 142 37.3
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 9.2e-19 98.6 283 29.3
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.6e-18 97.8 84 51.2
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 2.1e-18 97.4 110 46.4
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 4.6e-18 96.3 302 28.8
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.7e-17 94.4 307 27.4
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 2.3e-17 94.0 312 28.5
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 6.6e-17 92.4 125 36.0
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 6.6e-17 92.4 125 36.0
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 1.5e-16 91.3 323 25.4
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 1.9e-16 90.9 276 27.5
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 4.3e-16 89.7 303 29.0
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 9.6e-16 88.6 368 25.5
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 3.6e-15 86.7 308 27.6
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 3.6e-15 86.7 255 26.7
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 3.6e-15 86.7 292 27.7
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 8.1e-15 85.5 310 28.4
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 1.8e-14 84.3 316 27.2
Mapoly0022s0094 Marchantia polymorpha HOM05D001925 ORTHO05D004257 2.4e-14 84.0 91 47.3
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 1.2e-13 81.6 311 26.4
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 2.0e-13 80.9 265 27.5
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 7.6e-13 79.0 217 30.4
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 1.3e-12 78.2 308 26.0
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 1.3e-12 78.2 308 26.0
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 2.2e-12 77.4 258 32.2
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 3.8e-12 76.6 266 27.1
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 2.4e-11 73.9 304 27.0
SMO364G0089 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 7.1e-11 72.4 88 44.3
SMO112G0035 Selaginella moellendorffii HOM05D001925 ORTHO05D004257 9.3e-11 72.0 88 44.3
Pp3c15_17300 Physcomitrium patens HOM05D001925 ORTHO05D004257 2.3e-09 67.4 87 42.5
Pp3c9_18340 Physcomitrium patens HOM05D001925 ORTHO05D004257 1.3e-07 61.6 87 40.2
Zm00001eb087910 Zea mays HOM05D001925 ORTHO05D004257 8.1e-07 58.9 78 37.2
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 8.1e-07 58.9 78 37.2
Zm00001eb415260 Zea mays HOM05D001925 ORTHO05D004257 8.1e-07 58.9 78 37.2
SEGI_37364 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 1.8e-06 57.8 59 44.1
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 4.0e-06 56.6 95 33.7
C04p06870 Brassica napus HOM05D001925 ORTHO05D004257 5.3e-06 56.2 66 40.9
BolC4t22309H Brassica oleracea HOM05D001925 ORTHO05D004257 5.3e-06 56.2 66 40.9


User provided reference genes

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