Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 9.6e-67 256.9 151 100.0
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 6.3e-34 147.9 111 84.7
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 6.7e-20 101.3 148 42.6
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 6.7e-20 101.3 146 39.7
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 8.8e-20 100.9 147 40.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.3e-18 97.1 148 39.2
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 3.7e-18 95.5 147 44.2
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 6.3e-18 94.7 145 40.7
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 8.2e-18 94.4 147 39.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 8.2e-18 94.4 129 41.1
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.4e-17 93.6 142 37.3
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.8e-17 93.2 143 47.6
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.4e-17 92.8 144 40.3
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.1e-17 92.0 147 37.4
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.2e-16 90.5 132 39.4
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.6e-16 90.1 129 38.0
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.6e-16 89.4 148 37.2
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 3.5e-16 89.0 147 45.6
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 4.5e-16 88.6 144 36.1
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 4.5e-16 88.6 135 48.9
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 4.5e-16 88.6 148 44.6
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.3e-15 87.0 129 53.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.9e-15 85.9 151 35.1
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 3.8e-15 85.5 149 35.6
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 6.5e-15 84.7 149 36.9
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.5e-14 82.8 146 48.6
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 5.5e-14 81.6 132 38.6
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 9.4e-14 80.9 132 36.4
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 9.4e-14 80.9 130 37.7
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.6e-13 80.1 127 40.9
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.6e-13 80.1 147 40.1
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 2.1e-13 79.7 144 41.0
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.7e-13 79.3 153 34.6
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.6e-13 79.0 127 40.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 3.6e-13 79.0 153 33.3
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 3.6e-13 79.0 147 40.8
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 8.0e-13 77.8 145 38.6
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.0e-12 77.4 149 36.2
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.0e-12 75.9 134 34.3
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 8.8e-12 74.3 129 40.3
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.2e-11 73.9 134 33.6
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.2e-11 73.9 131 35.9
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.2e-11 73.9 155 34.2
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.5e-11 73.6 153 30.7
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.5e-11 73.6 134 32.8
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.0e-11 73.2 134 33.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.0e-11 73.2 133 32.3
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.6e-11 72.8 134 32.8
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 2.6e-11 72.8 163 39.3
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.3e-11 72.4 134 32.8
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 4.4e-11 72.0 148 35.1
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 5.7e-11 71.6 154 34.4
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 7.5e-11 71.2 147 34.7
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 7.5e-11 71.2 132 34.8
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 9.7e-11 70.9 129 42.6
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 1.3e-10 70.5 129 48.8
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 1.7e-10 70.1 151 33.8
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.7e-10 70.1 160 33.8
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.7e-10 70.1 149 34.9
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 2.8e-10 69.3 131 39.7
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.8e-10 69.3 141 31.2
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 3.7e-10 68.9 129 44.2
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 6.3e-10 68.2 151 31.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 6.3e-10 68.2 142 33.8
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 8.2e-10 67.8 147 32.0
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.1e-09 67.4 142 33.8
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 1.1e-09 67.4 131 35.1
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.4e-09 67.0 152 31.6
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 2.4e-09 66.2 155 37.4
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.1e-09 65.9 162 31.5
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 5.3e-09 65.1 163 39.9
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 5.3e-09 65.1 116 33.6
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 7.0e-09 64.7 145 33.1
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.2e-08 63.9 151 37.1
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.2e-08 63.9 129 39.5
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.0e-08 63.2 116 32.8
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.7e-08 62.8 116 33.6
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.7e-08 62.8 139 30.9
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 2.7e-08 62.8 139 30.9
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.5e-08 62.0 109 36.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 7.7e-08 61.2 148 32.4
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-07 60.5 130 34.6
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.9e-07 59.3 136 32.4
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 2.9e-07 59.3 138 31.9
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 3.8e-07 58.9 163 26.4
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 3.8e-07 58.9 136 30.1
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 6.5e-07 58.2 149 29.5
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 6.5e-07 58.2 168 27.4
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 8.5e-07 57.8 111 34.2
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 8.5e-07 57.8 47 55.3
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.1e-06 57.4 139 27.3
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.1e-06 57.4 146 32.2
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.5e-06 57.0 118 33.1
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.5e-06 56.2 136 33.1
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.2e-06 55.8 136 29.4
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 5.5e-06 55.1 150 30.0
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 5.5e-06 55.1 49 53.1
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.2e-06 54.7 136 28.7


User provided reference genes

Program Settings