Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 7.9e-28 126.3 61 100.0
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 1.9e-21 105.1 58 79.3
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 2.1e-20 101.7 58 75.9
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 4.6e-20 100.5 58 77.6
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 7.9e-20 99.8 58 74.1
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 7.9e-20 99.8 58 75.9
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 1.3e-19 99.0 58 75.9
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 1.5e-18 95.5 59 72.9
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 1.9e-18 95.1 58 69.0
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 1.9e-18 95.1 53 77.4
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 2.5e-18 94.7 58 69.0
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 2.5e-18 94.7 58 70.7
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 2.5e-18 94.7 61 72.1
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 3.3e-18 94.4 58 72.4
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 4.3e-18 94.0 60 71.7
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 5.7e-18 93.6 59 72.9
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 1.3e-17 92.4 52 75.0
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 1.3e-17 92.4 58 70.7
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 1.6e-17 92.0 59 71.2
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 1.6e-17 92.0 57 73.7
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 2.2e-17 91.7 59 71.2
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 2.8e-17 91.3 58 74.1
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 2.8e-17 91.3 53 73.6
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 2.8e-17 91.3 53 73.6
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 4.8e-17 90.5 60 68.3
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 4.8e-17 90.5 52 76.9
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 6.3e-17 90.1 58 72.4
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 6.3e-17 90.1 53 75.5
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 6.3e-17 90.1 53 75.5
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 8.2e-17 89.7 53 73.6
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 1.1e-16 89.4 58 70.7
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.1e-16 89.4 56 69.6
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 1.4e-16 89.0 54 77.8
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 1.8e-16 88.6 60 65.0
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 1.8e-16 88.6 58 69.0
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 1.8e-16 88.6 60 65.0
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 4.1e-16 87.4 54 72.2
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 5.3e-16 87.0 56 71.4
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 1.2e-15 85.9 55 70.9
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 1.2e-15 85.9 54 70.4
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 1.5e-15 85.5 60 70.0
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 1.5e-15 85.5 54 70.4
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 7.7e-15 83.2 54 70.4
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 7.7e-15 83.2 49 73.5
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 7.7e-15 83.2 49 73.5
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 7.7e-15 83.2 55 69.1
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 7.7e-15 83.2 49 77.6
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 1.7e-14 82.0 55 65.5
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 1.7e-14 82.0 53 69.8
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 1.7e-14 82.0 51 74.5
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 3.8e-14 80.9 60 63.3
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 3.8e-14 80.9 44 72.7
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 5.0e-14 80.5 42 83.3
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 6.5e-14 80.1 55 67.3
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 6.5e-14 80.1 50 68.0
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 2.5e-13 78.2 79 54.4
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 4.2e-13 77.4 55 65.5
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 4.2e-13 77.4 40 85.0
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 5.5e-13 77.0 40 85.0
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 7.2e-13 76.6 61 62.3
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 7.2e-13 76.6 61 62.3
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 7.2e-13 76.6 61 62.3
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 7.2e-13 76.6 61 62.3
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 7.2e-13 76.6 61 62.3
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 7.2e-13 76.6 40 85.0
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 7.2e-13 76.6 55 65.5
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 9.4e-13 76.3 61 60.7
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 1.6e-12 75.5 62 59.7
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 2.1e-12 75.1 39 84.6
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 2.1e-12 75.1 49 69.4
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 6.1e-12 73.6 52 67.3
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 7.9e-12 73.2 55 65.5
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 7.9e-12 73.2 55 65.5
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 1.8e-11 72.0 55 61.8
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 1.8e-11 72.0 61 62.3
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 1.8e-11 72.0 61 62.3
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 2.3e-11 71.6 42 69.0
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 2.3e-11 71.6 49 71.4
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 3.0e-11 71.2 40 75.0
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 6.7e-11 70.1 41 78.0
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 1.5e-10 68.9 46 65.2
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 1.5e-10 68.9 49 67.3
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 1.5e-10 68.9 49 65.3
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 6.3e-09 63.5 49 65.3
Pp3c3_14890 Physcomitrium patens HOM05D007860 ORTHO05D009950 6.5e-06 53.5 42 57.1


User provided reference genes

Program Settings