Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 2.2e-45 185.3 95 100.0
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 2.7e-14 82.0 97 47.4
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 4.5e-14 81.3 94 45.7
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 5.9e-14 80.9 96 49.0
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 7.7e-14 80.5 96 49.0
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.0e-13 80.1 96 46.9
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 2.3e-13 79.0 88 50.0
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 2.9e-13 78.6 100 47.0
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 3.8e-13 78.2 97 46.4
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 8.6e-13 77.0 86 50.0
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.5e-12 76.3 89 50.6
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.5e-12 76.3 89 49.4
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 2.5e-12 75.5 96 46.9
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 3.2e-12 75.1 62 59.7
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 3.2e-12 75.1 93 48.4
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 4.2e-12 74.7 94 45.7
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 5.5e-12 74.3 89 46.1
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 7.2e-12 73.9 88 45.5
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 7.2e-12 73.9 101 44.6
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 9.5e-12 73.6 97 46.4
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 1.2e-11 73.2 103 44.7
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 1.2e-11 73.2 90 52.2
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.6e-11 72.8 89 46.1
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.6e-11 72.8 90 51.1
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 2.1e-11 72.4 97 43.3
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.1e-11 72.4 89 48.3
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 2.1e-11 72.4 61 57.4
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 3.6e-11 71.6 94 44.7
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 3.6e-11 71.6 79 49.4
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 4.7e-11 71.2 62 58.1
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 4.7e-11 71.2 62 58.1
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 4.7e-11 71.2 91 45.1
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 6.1e-11 70.9 94 43.6
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 8.0e-11 70.5 88 45.5
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 8.0e-11 70.5 89 43.8
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.0e-10 70.1 91 42.9
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.0e-10 70.1 78 48.7
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.4e-10 69.7 88 47.7
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 1.4e-10 69.7 88 44.3
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 1.4e-10 69.7 95 44.2
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.4e-10 69.7 91 42.9
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.8e-10 69.3 103 41.7
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 2.3e-10 68.9 94 44.7
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 3.0e-10 68.6 78 46.2
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 3.0e-10 68.6 98 43.9
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 4.0e-10 68.2 88 44.3
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 5.2e-10 67.8 88 44.3
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 5.2e-10 67.8 99 42.4
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 6.8e-10 67.4 66 50.0
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 8.8e-10 67.0 66 50.0
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 8.8e-10 67.0 79 51.9
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 8.8e-10 67.0 103 42.7
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.2e-09 66.6 100 44.0
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 1.2e-09 66.6 88 40.9
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.5e-09 66.2 93 38.7
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 1.5e-09 66.2 88 43.2
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 1.5e-09 66.2 94 41.5
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 2.6e-09 65.5 100 38.0
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.6e-09 65.5 93 44.1
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 3.4e-09 65.1 88 43.2
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 4.4e-09 64.7 79 54.4
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 4.4e-09 64.7 68 47.1
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 5.7e-09 64.3 58 56.9
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 7.5e-09 63.9 79 48.1
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 7.5e-09 63.9 79 49.4
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 9.8e-09 63.5 98 39.8
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 9.8e-09 63.5 98 39.8
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 9.8e-09 63.5 70 52.9
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.3e-08 63.2 67 53.7
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.7e-08 62.8 92 43.5
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.7e-08 62.8 67 53.7
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 2.8e-08 62.0 44 65.9
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 2.8e-08 62.0 109 42.2
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 3.7e-08 61.6 97 38.1
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 4.9e-08 61.2 98 38.8
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 4.9e-08 61.2 94 41.5
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 4.9e-08 61.2 79 46.8
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 6.3e-08 60.8 99 38.4
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 6.3e-08 60.8 66 50.0
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 6.3e-08 60.8 89 38.2
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 8.3e-08 60.5 94 39.4
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 8.3e-08 60.5 54 53.7
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 8.3e-08 60.5 54 53.7
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 8.3e-08 60.5 100 41.0
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 1.4e-07 59.7 102 39.2
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 2.4e-07 58.9 95 41.1
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 3.1e-07 58.5 54 50.0
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 3.1e-07 58.5 52 51.9
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 3.1e-07 58.5 94 39.4
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 4.1e-07 58.2 54 50.0
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 4.1e-07 58.2 54 50.0
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 9.2e-07 57.0 95 41.1
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 9.2e-07 57.0 95 41.1
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 9.2e-07 57.0 95 41.1
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 1.2e-06 56.6 53 47.2
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.2e-06 56.6 64 50.0
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 1.6e-06 56.2 74 45.9
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 2.0e-06 55.8 55 50.9
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.7e-06 55.5 80 43.8
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 5.9e-06 54.3 67 46.3


User provided reference genes

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