Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 7.1e-133 477.2 237 100.0
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 3.2e-32 142.9 201 45.8
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.7e-31 139.8 247 43.7
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.0e-30 137.9 204 42.6
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.7e-30 137.1 233 42.9
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.3e-30 136.7 208 46.2
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 3.9e-30 136.0 219 42.9
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 2.1e-28 130.2 220 40.5
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 2.1e-28 130.2 217 40.6
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.6e-28 129.4 237 39.7
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.6e-28 129.4 213 41.3
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 3.6e-28 129.4 212 46.7
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 8.1e-28 128.3 232 40.5
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 8.1e-28 128.3 212 43.4
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 8.1e-28 128.3 216 42.6
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 1.4e-27 127.5 211 42.2
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 1.8e-27 127.1 246 39.8
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 1.8e-27 127.1 243 39.5
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 2.3e-27 126.7 219 41.6
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 8.9e-27 124.8 186 44.6
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 1.7e-25 120.6 245 41.6
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.7e-25 120.6 240 38.8
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.2e-25 120.2 221 39.8
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.9e-25 119.8 202 40.6
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 2.9e-25 119.8 221 40.3
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.7e-25 119.4 239 38.9
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.9e-25 119.0 205 42.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 6.4e-25 118.6 204 40.7
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.1e-24 117.9 230 37.8
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.1e-24 117.9 210 40.5
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.4e-24 117.5 215 40.0
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.9e-24 117.1 190 43.2
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.9e-24 117.1 181 45.3
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 2.4e-24 116.7 180 41.7
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 4.1e-24 115.9 241 40.2
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.1e-24 115.9 205 42.4
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 5.4e-24 115.5 199 42.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 9.2e-24 114.8 243 36.2
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.2e-23 114.4 241 39.8
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.2e-23 114.4 241 38.2
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.1e-23 113.6 239 38.5
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.1e-23 113.6 238 38.2
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.1e-23 113.6 239 38.5
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 6.0e-23 112.1 223 39.0
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 7.8e-23 111.7 235 39.6
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 7.8e-23 111.7 246 35.8
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.8e-23 111.7 239 38.1
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 1.0e-22 111.3 225 38.7
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 1.3e-22 110.9 234 38.5
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 1.3e-22 110.9 245 38.0
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.3e-22 110.2 238 38.2
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 2.3e-22 110.2 204 39.2
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 2.3e-22 110.2 210 40.5
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 3.0e-22 109.8 242 39.7
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 3.9e-22 109.4 239 39.7
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 5.1e-22 109.0 236 38.1
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 6.6e-22 108.6 226 36.3
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.1e-21 107.8 237 38.0
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.5e-21 107.5 214 40.2
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.9e-21 107.1 235 39.1
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 1.9e-21 107.1 229 39.3
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 1.9e-21 107.1 229 39.3
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 1.9e-21 107.1 235 39.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.9e-21 107.1 218 37.2
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.9e-21 107.1 229 37.6
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.9e-21 107.1 243 36.2
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.5e-21 106.7 228 36.8
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.5e-21 106.7 241 39.8
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 4.3e-21 105.9 238 36.1
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 7.3e-21 105.1 205 37.6
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.3e-21 105.1 198 39.4
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 9.6e-21 104.8 231 35.9
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.2e-20 104.4 222 38.7
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.6e-20 104.0 180 38.9
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 2.8e-20 103.2 245 35.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 3.6e-20 102.8 233 39.1
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.7e-20 102.4 222 37.4
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 6.2e-20 102.1 240 36.2
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 6.2e-20 102.1 247 36.0
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.1e-19 101.3 223 38.6
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 1.4e-19 100.9 215 39.5
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.8e-19 100.5 193 37.8
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 4.0e-19 99.4 234 37.6
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 8.9e-19 98.2 199 38.7
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 3.4e-18 96.3 184 40.8
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 3.4e-18 96.3 241 35.7
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 4.4e-18 95.9 227 37.9
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 4.4e-18 95.9 196 39.8
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 5.8e-18 95.5 211 38.9
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 7.6e-18 95.1 233 34.8
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 9.9e-18 94.7 184 40.8
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.7e-17 94.0 235 34.0
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 2.2e-17 93.6 234 34.2
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 2.9e-17 93.2 216 37.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 6.4e-17 92.0 261 35.2
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 6.4e-17 92.0 233 34.3
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.4e-16 90.9 229 34.5
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 5.4e-16 89.0 220 33.2
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 5.4e-16 89.0 220 33.2
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.1e-16 88.6 222 35.1
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.3e-16 88.2 215 35.8
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 2.1e-15 87.0 174 36.8
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 2.1e-15 87.0 179 35.8
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.1e-15 87.0 188 37.8
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 3.5e-15 86.3 216 33.8
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 1.3e-14 84.3 202 35.6
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.7e-14 84.0 190 33.7
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 3.0e-14 83.2 188 37.8
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 3.9e-14 82.8 186 38.2
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 6.6e-14 82.0 186 38.2
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 6.6e-14 82.0 183 38.3
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 6.6e-14 82.0 186 38.2
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.1e-13 81.3 158 38.6
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 5.6e-13 79.0 214 33.2
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 7.3e-13 78.6 234 32.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 7.3e-13 78.6 199 32.2
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 8.1e-12 75.1 132 38.6
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 1.1e-11 74.7 177 34.5
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.5e-10 70.9 287 29.6
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.5e-10 70.9 223 31.4
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 4.4e-10 69.3 205 32.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 3.8e-09 66.2 262 30.2
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 3.8e-09 66.2 140 37.9
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 1.2e-07 61.2 91 45.1


User provided reference genes

Program Settings