Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0561 Ceratophyllum demersum HOM05D005086 ORTHO05D005980 3.4e-64 248.1 117 100.0
CDE08G0515 Ceratophyllum demersum HOM05D005086 ORTHO05D005980 7.0e-49 197.2 97 93.8
CDE02G2042 Ceratophyllum demersum HOM05D005086 ORTHO05D005980 3.2e-46 188.3 97 89.7
EL10As10g23958 Beta vulgaris HOM05D005086 ORTHO05D005980 7.2e-38 160.6 97 71.1
MBI06_g41412_MAGBIO Magnolia biondii HOM05D005086 ORTHO05D005980 1.6e-37 159.5 97 72.2
Hund26734 Selenicereus undatus HOM05D005086 ORTHO05D005980 2.8e-37 158.7 97 72.2
Manes.02G174400 Manihot esculenta HOM05D005086 ORTHO05D005980 3.6e-37 158.3 97 73.2
Potri.005G187400 Populus trichocarpa HOM05D005086 ORTHO05D005980 6.1e-37 157.5 97 71.1
Oeu046001.1 Olea europaea HOM05D005086 ORTHO05D005980 8.0e-37 157.1 97 72.2
Ah.05g167500 Amaranthus hybridus HOM05D005086 ORTHO05D005980 1.0e-36 156.8 97 69.1
MBI06_g35967_MAGBIO Magnolia biondii HOM05D005086 ORTHO05D005980 1.4e-36 156.4 97 71.1
Sabra05G0143000 Salix brachista HOM05D005086 ORTHO05D005980 1.4e-36 156.4 97 70.1
Manes.18G086500 Manihot esculenta HOM05D005086 ORTHO05D005980 1.8e-36 156.0 96 74.0
CSS0007222 Camellia sinensis var. sinensis HOM05D005086 ORTHO05D005980 4.0e-36 154.8 97 69.1
Potri.002G072300 Populus trichocarpa HOM05D005086 ORTHO05D005980 4.0e-36 154.8 97 72.2
Atru.chr13.1691 Acer truncatum HOM05D005086 ORTHO05D005980 6.8e-36 154.1 90 75.6
TWI74G0391 Tripterygium wilfordii HOM05D005086 ORTHO05D005980 6.8e-36 154.1 97 69.1
Nn5g28611 Nelumbo nucifera HOM05D005086 ORTHO05D005980 8.9e-36 153.7 97 69.1
Oeu025719.1 Olea europaea HOM05D005086 ORTHO05D005980 8.9e-36 153.7 97 70.1
Sabra02G0056900 Salix brachista HOM05D005086 ORTHO05D005980 1.2e-35 153.3 97 70.1
CiPaw.16G018300 Carya illinoinensis HOM05D005086 ORTHO05D005980 2.0e-35 152.5 97 70.1
TAR625G0035 Trochodendron aralioides HOM05D005086 ORTHO05D005980 2.6e-35 152.1 97 70.1
vmacro00889 Vaccinium macrocarpon HOM05D005086 ORTHO05D005980 3.4e-35 151.8 97 67.0
CiPaw.15G022200 Carya illinoinensis HOM05D005086 ORTHO05D005980 5.7e-35 151.0 97 68.0
Sc20g0003350 Simmondsia chinensis HOM05D005086 ORTHO05D005980 5.7e-35 151.0 97 67.0
CSS0017168 Camellia sinensis var. sinensis HOM05D005086 ORTHO05D005980 7.5e-35 150.6 93 69.9
DCAR_001547 Daucus carota HOM05D005086 ORTHO05D005980 7.5e-35 150.6 97 67.0
Duzib041G0632 Durio zibethinus HOM05D005086 ORTHO05D005980 9.8e-35 150.2 97 69.1
SalBow7G2754 Salvia bowleyana HOM05D005086 ORTHO05D005980 9.8e-35 150.2 97 70.1
vmacro00876 Vaccinium macrocarpon HOM05D005086 ORTHO05D005980 9.8e-35 150.2 97 66.0
BcaC07g39103 Brassica carinata HOM05D005086 ORTHO05D005980 1.3e-34 149.8 97 69.1
Ciclev10001104m.g Citrus clementina HOM05D005086 ORTHO05D005980 1.3e-34 149.8 90 72.2
QL02p025654 Quercus lobata HOM05D005086 ORTHO05D005980 1.3e-34 149.8 97 67.0
ATR1136G054 Amborella trichopoda HOM05D005086 ORTHO05D005980 1.7e-34 149.4 97 71.1
Duzib116G0169 Durio zibethinus HOM05D005086 ORTHO05D005980 1.7e-34 149.4 97 70.1
Actinidia16590 Actinidia chinensis HOM05D005086 ORTHO05D005980 2.2e-34 149.1 97 68.0
BolC8t49724H Brassica oleracea HOM05D005086 ORTHO05D005980 2.2e-34 149.1 97 69.1
Cc10_g12980 Coffea canephora HOM05D005086 ORTHO05D005980 2.2e-34 149.1 97 67.0
Thecc.08G143500 Theobroma cacao HOM05D005086 ORTHO05D005980 2.2e-34 149.1 97 69.1
BcaB03g12814 Brassica carinata HOM05D000987 ORTHO05D005980 2.8e-34 148.7 97 69.1
Nitab4.5_0000445g0110 Nicotiana tabacum HOM05D005086 ORTHO05D005980 2.8e-34 148.7 97 68.0
SGA_v2.0_scaffold24G10385 Striga asiatica HOM05D005086 ORTHO05D005980 2.8e-34 148.7 97 69.1
GSVIVG01010019001 Vitis vinifera HOM05D005086 ORTHO05D005980 2.8e-34 148.7 97 67.0
Cpa.g.sc49.73 Carica papaya HOM05D005086 ORTHO05D005980 4.9e-34 147.9 96 69.8
Nitab4.5_0004095g0020 Nicotiana tabacum HOM05D005086 ORTHO05D005980 4.9e-34 147.9 97 68.0
Rhsim11G0077300 Rhododendron simsii HOM05D005086 ORTHO05D005980 4.9e-34 147.9 97 66.0
BcaC05g26055 Brassica carinata HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 67.0
C05p20340 Brassica napus HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 67.0
BolC5t30730H Brassica oleracea HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 67.0
Lj4A690G48 Lonicera japonica HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 68.0
Phvul.001G063800 Phaseolus vulgaris HOM05D005086 ORTHO05D005980 8.3e-34 147.1 89 71.9
PGR044G0933 Punica granatum HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 69.1
Sp1g19010 Schrenkiella parvula HOM05D005086 ORTHO05D005980 8.3e-34 147.1 97 68.0
SEGI_35480 Sequoiadendron giganteum HOM05D005086 ORTHO05D005980 1.1e-33 146.7 96 66.7
Thecc.08G143300 Theobroma cacao HOM05D005086 ORTHO05D005980 1.1e-33 146.7 97 67.0
HPP92_013480 Vanilla planifolia HOM05D005086 ORTHO05D005980 1.1e-33 146.7 88 69.3
VMungo0647G0181 Vigna mungo HOM05D005086 ORTHO05D005980 1.1e-33 146.7 89 73.0
MSTRG.1377 Avicennia marina HOM05D005086 ORTHO05D005980 1.4e-33 146.4 97 67.0
Sed0020214 Sechium edule HOM05D005086 ORTHO05D005980 1.4e-33 146.4 97 66.0
BraA08t34827Z Brassica rapa HOM05D005086 ORTHO05D005980 1.8e-33 146.0 97 68.0
Migut.C01051 Erythranthe guttata HOM05D005086 ORTHO05D005980 1.8e-33 146.0 89 71.9
ClCG08G006410 Citrullus lanatus HOM05D005086 ORTHO05D005980 2.4e-33 145.6 95 67.4
MELO3C008415.2 Cucumis melo HOM05D005086 ORTHO05D005980 2.4e-33 145.6 97 64.9
CsaV3_6G031010 Cucumis sativus L. HOM05D005086 ORTHO05D005980 2.4e-33 145.6 97 64.9
Eucgr.E02380 Eucalyptus grandis HOM05D005086 ORTHO05D005980 2.4e-33 145.6 97 67.0
Solyc04g064680.4 Solanum lycopersicum HOM05D005086 ORTHO05D005980 2.4e-33 145.6 97 67.0
Sopen04g026640 Solanum pennellii HOM05D005086 ORTHO05D005980 2.4e-33 145.6 97 67.0
Thhalv10007584m.g Eutrema salsugineum HOM05D005086 ORTHO05D005980 3.1e-33 145.2 97 66.0
Lj2g0027047 Lotus japonicus HOM05D005086 ORTHO05D005980 3.1e-33 145.2 89 70.8
Cfa018373 Carpinus fangiana HOM05D005086 ORTHO05D005980 4.1e-33 144.8 97 67.0
Dinv41130 Davidia involucrata HOM05D005086 ORTHO05D005980 4.1e-33 144.8 90 70.0
PSO675G1430 Papaver somniferum HOM05D005086 ORTHO05D005980 5.4e-33 144.4 97 63.9
SHI09486 Sapria himalayana HOM05D005086 ORTHO05D005980 5.4e-33 144.4 89 67.4
PGSC0003DMG400024814 Solanum tuberosum HOM05D005086 ORTHO05D005980 5.4e-33 144.4 97 66.0
AL1G34590 Arabidopsis lyrata HOM05D005086 ORTHO05D005980 7.0e-33 144.1 97 67.0
AT1G21480 Arabidopsis thaliana HOM05D005086 ORTHO05D005980 7.0e-33 144.1 97 67.0
Ca_12658_v3 Cicer arietinum L. HOM05D005086 ORTHO05D005980 1.2e-32 143.3 89 69.7
Gohir.A02G067100 Gossypium hirsutum HOM05D005086 ORTHO05D005980 1.2e-32 143.3 97 63.9
Gorai.005G082700 Gossypium raimondii HOM05D005086 ORTHO05D005980 1.2e-32 143.3 97 63.9
Peaxi162Scf00263g00031 Petunia axillaris HOM05D005086 ORTHO05D005980 1.2e-32 143.3 97 66.0
BraA06t24847Z Brassica rapa HOM05D005086 ORTHO05D005980 1.6e-32 142.9 97 64.9
CANSAT80G0700 Cannabis sativa HOM05D005086 ORTHO05D005980 1.6e-32 142.9 90 66.7
A06p17510 Brassica napus HOM05D005086 ORTHO05D005980 2.0e-32 142.5 97 66.0
HanXRQChr05g0160791 Helianthus annuus HOM05D005086 ORTHO05D005980 2.0e-32 142.5 97 64.9
Hma1.2p1_0107F.1_g051390 Hydrangea macrophylla HOM05D005086 ORTHO05D005980 2.0e-32 142.5 97 64.9
BcaB07g32137 Brassica carinata HOM05D005086 ORTHO05D005980 2.7e-32 142.1 97 64.9
Aqoxy6G00340 Aquilegia oxysepala HOM05D005086 ORTHO05D005980 4.5e-32 141.4 88 70.5
CAN.G2.46 Capsicum annuum HOM05D005086 ORTHO05D005980 4.5e-32 141.4 97 63.9
Lsat_1_v5_gn_6_96840 Lactuca sativa HOM05D005086 ORTHO05D005980 4.5e-32 141.4 97 64.9
Duzib093G1227 Durio zibethinus HOM05D005086 ORTHO05D005980 5.9e-32 141.0 97 64.9
Medtr1g029350 Medicago truncatula HOM05D005086 ORTHO05D005980 5.9e-32 141.0 89 68.5
TPR.G33329 Trifolium pratense HOM05D005086 ORTHO05D005980 5.9e-32 141.0 89 69.7
Prupe.8G017900 Prunus persica HOM05D005086 ORTHO05D005980 7.8e-32 140.6 97 64.9
MD10G1012500 Malus domestica HOM05D005086 ORTHO05D005980 1.0e-31 140.2 97 64.9
Zm00001eb147610 Zea mays HOM05D005086 ORTHO05D005980 1.0e-31 140.2 88 69.3
FvH4_2g14790 Fragaria vesca HOM05D005086 ORTHO05D005980 1.7e-31 139.4 97 64.9
Glyma.14G202400 Glycine max HOM05D005086 ORTHO05D005980 1.7e-31 139.4 88 69.3
Aa31LG7G5420 Aethionema arabicum HOM05D005086 ORTHO05D005980 2.3e-31 139.0 97 63.9
PSO675G5177 Papaver somniferum HOM05D005086 ORTHO05D005980 2.3e-31 139.0 97 60.8
Sed0007666 Sechium edule HOM05D005086 ORTHO05D005980 2.3e-31 139.0 97 62.9
Gohir.D02G073300 Gossypium hirsutum HOM05D005086 ORTHO05D005980 2.9e-31 138.7 97 61.9
CARHR021850 Cardamine hirsuta HOM05D005086 ORTHO05D005980 3.8e-31 138.3 97 63.9
Lj1g0013822 Lotus japonicus HOM05D005086 ORTHO05D005980 3.8e-31 138.3 89 69.7
Peaxi162Scf00263g00036 Petunia axillaris HOM05D005086 ORTHO05D005980 3.8e-31 138.3 97 63.9
Carub.0001s2088 Capsella rubella HOM05D005086 ORTHO05D005980 5.0e-31 137.9 97 63.9
FAN20G2551 Fragaria x ananassa HOM05D005086 ORTHO05D005980 5.0e-31 137.9 97 64.9
Lalb_Chr20g0118701 Lupinus albus HOM05D005086 ORTHO05D005980 5.0e-31 137.9 89 68.5
MD05G1012600 Malus domestica HOM05D005086 ORTHO05D005980 6.6e-31 137.5 89 69.7
PSO541G4886 Papaver somniferum HOM05D005086 ORTHO05D005980 6.6e-31 137.5 97 60.8
RcHm_v2.0_Chr6g0277351 Rosa chinensis HOM05D005086 ORTHO05D005980 8.6e-31 137.1 97 64.9
arahy.Tifrunner.gnm1.ann1.1CL4KB Arachis hypogaea HOM05D005086 ORTHO05D005980 1.1e-30 136.7 88 69.3
arahy.Tifrunner.gnm1.ann1.AQ25H9 Arachis hypogaea HOM05D005086 ORTHO05D005980 1.1e-30 136.7 88 69.3
THA.LOC104812071 Tarenaya hassleriana HOM05D005086 ORTHO05D005980 1.1e-30 136.7 97 64.9
FAN15G0455 Fragaria x ananassa HOM05D005086 ORTHO05D005980 1.5e-30 136.3 97 63.9
Pp3c14_16130 Physcomitrium patens HOM05D005086 ORTHO05D005980 2.5e-30 135.6 99 60.6
COL.COLO4_33184 Corchorus olitorius HOM05D005086 ORTHO05D005980 7.3e-30 134.0 85 70.6
RcHm_v2.0_Chr1g0331511 Rosa chinensis HOM05D005086 ORTHO05D005980 9.5e-30 133.7 97 63.9
C08p20850 Brassica napus HOM05D005086 ORTHO05D005980 1.2e-29 133.3 124 54.0
A08p28940 Brassica napus HOM05D005086 ORTHO05D005980 1.6e-29 132.9 124 54.0
AagrBONN_evm.TU.Sc2ySwM_228.5615 Anthoceros agrestis HOM05D005086 ORTHO05D005980 2.1e-29 132.5 86 64.0
unitig_82.g27089 Utricularia gibba HOM05D005086 ORTHO05D005980 2.1e-29 132.5 89 65.2
THA.LOC104810043 Tarenaya hassleriana HOM05D005086 ORTHO05D005980 2.8e-29 132.1 89 67.4
SMO174G0205 Selaginella moellendorffii HOM05D005086 ORTHO05D005980 5.2e-28 127.9 84 65.5
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 2.0e-27 125.9 80 70.0
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 2.6e-27 125.6 77 71.4
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 2.9e-26 122.1 83 66.3
Nn1g06227 Nelumbo nucifera HOM05D005086 ORTHO05D005980 8.3e-26 120.6 63 81.0
SGA_v2.0_scaffold48G17939 Striga asiatica HOM05D005086 ORTHO05D005980 3.5e-24 115.2 67 73.1
Actinidia15165 Actinidia chinensis HOM05D005086 ORTHO05D005980 8.6e-23 110.5 61 77.0
AUR62027615 Chenopodium quinoa HOM05D005086 ORTHO05D005980 2.8e-21 105.5 65 66.2
AUR62030231 Chenopodium quinoa HOM05D005086 ORTHO05D005980 1.8e-20 102.8 62 66.1


User provided reference genes

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