Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0549 Ceratophyllum demersum HOM05D002403 ORTHO05D002724 8.5e-41 169.9 83 100.0
CDE02G1988 Ceratophyllum demersum HOM05D002403 ORTHO05D002724 1.1e-35 152.9 82 92.7
COL.COLO4_14790 Corchorus olitorius HOM05D002403 ORTHO05D002724 2.8e-28 128.3 84 77.4
Hund21853 Selenicereus undatus HOM05D002403 ORTHO05D002724 2.8e-28 128.3 84 76.2
Thecc.05G038800 Theobroma cacao HOM05D002403 ORTHO05D002724 2.8e-28 128.3 84 77.4
GSVIVG01031286001 Vitis vinifera HOM05D002403 ORTHO05D002724 4.8e-28 127.5 84 76.2
Manes.08G080200 Manihot esculenta HOM05D002403 ORTHO05D002724 1.1e-27 126.3 84 75.0
ClCG01G010800 Citrullus lanatus HOM05D002403 ORTHO05D002724 1.4e-27 125.9 84 77.4
EL10Ac4g09511 Beta vulgaris HOM05D002403 ORTHO05D002724 1.8e-27 125.6 84 75.0
Cc02_g35400 Coffea canephora HOM05D002403 ORTHO05D002724 1.8e-27 125.6 82 76.8
MBI19_g32694_MAGBIO Magnolia biondii HOM05D002403 ORTHO05D002724 1.8e-27 125.6 84 75.0
MELO3C025524.2 Cucumis melo HOM05D002403 ORTHO05D002724 2.4e-27 125.2 84 77.4
ATR0693G037 Amborella trichopoda HOM05D002403 ORTHO05D002724 4.1e-27 124.4 82 76.8
Potri.003G155800 Populus trichocarpa HOM05D002403 ORTHO05D002724 5.3e-27 124.0 82 75.6
Potri.006G086000 Populus trichocarpa HOM05D002403 ORTHO05D002724 5.3e-27 124.0 82 75.6
QL03p017774 Quercus lobata HOM05D002403 ORTHO05D002724 7.0e-27 123.6 82 76.8
CsaV3_1G015760 Cucumis sativus L. HOM05D002403 ORTHO05D002724 9.1e-27 123.2 84 76.2
Gohir.A11G327000 Gossypium hirsutum HOM05D002403 ORTHO05D002724 1.2e-26 122.9 83 75.9
PGR031G0862 Punica granatum HOM05D002403 ORTHO05D002724 1.6e-26 122.5 84 75.0
Ah.06g196250 Amaranthus hybridus HOM05D002403 ORTHO05D002724 2.0e-26 122.1 84 73.8
Sed0015312 Sechium edule HOM05D002403 ORTHO05D002724 2.0e-26 122.1 84 75.0
Actinidia01670 Actinidia chinensis HOM05D002403 ORTHO05D002724 2.6e-26 121.7 84 72.6
Ciclev10012095m.g Citrus clementina HOM05D002403 ORTHO05D002724 2.6e-26 121.7 82 73.2
arahy.Tifrunner.gnm1.ann1.B4GIY0 Arachis hypogaea HOM05D002403 ORTHO05D002724 4.5e-26 120.9 84 72.6
Eucgr.H01294 Eucalyptus grandis HOM05D002403 ORTHO05D002724 4.5e-26 120.9 84 72.6
arahy.Tifrunner.gnm1.ann1.THA6J1 Arachis hypogaea HOM05D002403 ORTHO05D002724 5.9e-26 120.6 84 72.6
Gohir.D11G345900 Gossypium hirsutum HOM05D002403 ORTHO05D002724 5.9e-26 120.6 83 74.7
Gorai.007G376200 Gossypium raimondii HOM05D002403 ORTHO05D002724 5.9e-26 120.6 83 74.7
TWI53G0157 Tripterygium wilfordii HOM05D002403 ORTHO05D002724 5.9e-26 120.6 84 73.8
Sabra06G0065600 Salix brachista HOM05D002403 ORTHO05D002724 7.7e-26 120.2 82 73.2
Nitab4.5_0003044g0090 Nicotiana tabacum HOM05D002403 ORTHO05D002724 1.0e-25 119.8 82 74.4
Cfa006730 Carpinus fangiana HOM05D002403 ORTHO05D002724 1.3e-25 119.4 82 70.7
Duzib093G2011 Durio zibethinus HOM05D002403 ORTHO05D002724 1.3e-25 119.4 84 71.4
Haze_04030 Corylus avellana HOM05D002403 ORTHO05D002724 2.2e-25 118.6 82 70.7
vmacro19773 Vaccinium macrocarpon HOM05D002403 ORTHO05D002724 2.2e-25 118.6 82 74.4
VMungo0720G0820 Vigna mungo HOM05D002403 ORTHO05D002724 2.2e-25 118.6 84 71.4
Aqoxy5G02737 Aquilegia oxysepala HOM05D002403 ORTHO05D002724 2.9e-25 118.2 84 72.6
MSTRG.27921 Avicennia marina HOM05D002403 ORTHO05D002724 2.9e-25 118.2 82 73.2
Nitab4.5_0011298g0010 Nicotiana tabacum HOM05D002403 ORTHO05D002724 2.9e-25 118.2 82 73.2
CSS0018724 Camellia sinensis var. sinensis HOM05D002403 ORTHO05D002724 3.8e-25 117.9 84 71.4
CSS0029925 Camellia sinensis var. sinensis HOM05D002403 ORTHO05D002724 3.8e-25 117.9 84 71.4
Nn3g21835 Nelumbo nucifera HOM05D002403 ORTHO05D002724 3.8e-25 117.9 84 70.2
Peaxi162Scf00357g00622 Petunia axillaris HOM05D002403 ORTHO05D002724 5.0e-25 117.5 83 74.7
Glyma.10G145200 Glycine max HOM05D002403 ORTHO05D002724 8.5e-25 116.7 84 71.4
HanXRQChr17g0550561 Helianthus annuus HOM05D002403 ORTHO05D002724 1.1e-24 116.3 83 69.9
Lju99C10T11 Lonicera japonica HOM05D002403 ORTHO05D002724 1.1e-24 116.3 83 71.1
Phvul.007G203500 Phaseolus vulgaris HOM05D002403 ORTHO05D002724 1.1e-24 116.3 84 70.2
CAN.G1076.47 Capsicum annuum HOM05D002403 ORTHO05D002724 1.5e-24 115.9 83 72.3
TWI77G1018 Tripterygium wilfordii HOM05D002403 ORTHO05D002724 1.5e-24 115.9 84 71.4
Zm00001eb395610 Zea mays HOM05D002403 ORTHO05D002724 1.5e-24 115.9 84 69.0
Lj5g0016202 Lotus japonicus HOM05D002403 ORTHO05D002724 1.9e-24 115.5 83 71.1
CiPaw.08G153200 Carya illinoinensis HOM05D002403 ORTHO05D002724 2.5e-24 115.2 83 67.5
Rhsim05G0130100 Rhododendron simsii HOM05D002403 ORTHO05D002724 2.5e-24 115.2 84 70.2
HPP92_012778 Vanilla planifolia HOM05D002403 ORTHO05D002724 2.5e-24 115.2 83 68.7
ECA246G1410 Erigeron canadensis HOM05D002403 ORTHO05D002724 3.2e-24 114.8 83 69.9
Glyma.20G094300 Glycine max HOM05D002403 ORTHO05D002724 4.2e-24 114.4 81 71.6
Aa31LG1G22480 Aethionema arabicum HOM05D002403 ORTHO05D002724 5.5e-24 114.0 82 74.4
Os03g0316900 Oryza sativa ssp. japonica HOM05D002403 ORTHO05D002724 5.5e-24 114.0 83 71.1
Solyc01g100850.3 Solanum lycopersicum HOM05D002403 ORTHO05D002724 5.5e-24 114.0 83 71.1
Sopen01g044350 Solanum pennellii HOM05D002403 ORTHO05D002724 5.5e-24 114.0 83 71.1
PGSC0003DMG400002789 Solanum tuberosum HOM05D002403 ORTHO05D002724 5.5e-24 114.0 83 71.1
Psat6g153720 Pisum sativum HOM05D002403 ORTHO05D002724 7.2e-24 113.6 83 68.7
Atru.chr8.1982 Acer truncatum HOM05D002403 ORTHO05D002724 1.2e-23 112.8 82 70.7
PSO724G0808 Papaver somniferum HOM05D002403 ORTHO05D002724 1.2e-23 112.8 84 69.0
PSO729G0056 Papaver somniferum HOM05D002403 ORTHO05D002724 1.2e-23 112.8 84 69.0
Oeu053744.1 Olea europaea HOM05D002403 ORTHO05D002724 1.6e-23 112.5 82 70.7
TPR.G2594 Trifolium pratense HOM05D002403 ORTHO05D002724 1.6e-23 112.5 83 69.9
Medtr1g084720 Medicago truncatula HOM05D002403 ORTHO05D002724 2.1e-23 112.1 83 69.9
Hma1.2p1_1553F.1_g290230 Hydrangea macrophylla HOM05D002403 ORTHO05D002724 2.7e-23 111.7 82 69.5
RhsimUnG0037800 Rhododendron simsii HOM05D002403 ORTHO05D002724 2.7e-23 111.7 84 67.9
Sp6g40180 Schrenkiella parvula HOM05D002403 ORTHO05D002724 3.6e-23 111.3 81 72.8
Carub.0006s0111 Capsella rubella HOM05D002403 ORTHO05D002724 4.7e-23 110.9 81 74.1
CARHR211100 Cardamine hirsuta HOM05D002403 ORTHO05D002724 6.1e-23 110.5 81 74.1
AT5G02270 Arabidopsis thaliana HOM05D002403 ORTHO05D002724 8.0e-23 110.2 81 74.1
Migut.B00855 Erythranthe guttata HOM05D002403 ORTHO05D002724 8.0e-23 110.2 81 70.4
Thhalv10014095m.g Eutrema salsugineum HOM05D002403 ORTHO05D002724 8.0e-23 110.2 81 72.8
DCAR_001898 Daucus carota HOM05D002403 ORTHO05D002724 1.4e-22 109.4 83 67.5
Rhsim01G0130300 Rhododendron simsii HOM05D002403 ORTHO05D002724 1.4e-22 109.4 84 66.7
THA.LOC104827018 Tarenaya hassleriana HOM05D002403 ORTHO05D002724 3.0e-22 108.2 86 67.4
AL6G11530 Arabidopsis lyrata HOM05D002403 ORTHO05D002724 4.0e-22 107.8 81 72.8
CANSAT54G0224 Cannabis sativa HOM05D002403 ORTHO05D002724 4.0e-22 107.8 83 67.5
Ca_10188_v3 Cicer arietinum L. HOM05D000897 ORTHO05D000716 4.0e-22 107.8 83 67.5
A10p33350 Brassica napus HOM05D002403 ORTHO05D002724 1.1e-21 106.3 81 71.6
C09p74260 Brassica napus HOM05D002403 ORTHO05D002724 1.1e-21 106.3 81 71.6
BraA10t45366Z Brassica rapa HOM05D002403 ORTHO05D002724 1.1e-21 106.3 81 71.6
FvH4_6g08040 Fragaria vesca HOM05D002403 ORTHO05D002724 1.5e-21 105.9 83 67.5
FAN09G3356 Fragaria x ananassa HOM05D002403 ORTHO05D002724 1.5e-21 105.9 83 67.5
FAN14G3133 Fragaria x ananassa HOM05D002403 ORTHO05D002724 1.5e-21 105.9 83 67.5
BolC9t60159H Brassica oleracea HOM05D002403 ORTHO05D002724 2.0e-21 105.5 81 71.6
BraA03t09450Z Brassica rapa HOM05D002403 ORTHO05D002724 3.3e-21 104.8 81 69.1
FAN02G2552 Fragaria x ananassa HOM05D002403 ORTHO05D002724 3.3e-21 104.8 81 67.9
RcHm_v2.0_Chr3g0457711 Rosa chinensis HOM05D002403 ORTHO05D002724 4.4e-21 104.4 83 65.1
A03p00600 Brassica napus HOM05D002403 ORTHO05D002724 2.8e-20 101.7 81 69.1
FAN05G4162 Fragaria x ananassa HOM05D002403 ORTHO05D002724 8.2e-20 100.1 83 65.1
Prupe.6G308800 Prunus persica HOM05D002403 ORTHO05D002724 1.1e-19 99.8 83 65.1
Duzib106G1472 Durio zibethinus HOM05D002403 ORTHO05D002724 2.4e-19 98.6 78 69.2
Hma1.2p1_0726F.1_g208950 Hydrangea macrophylla HOM05D002403 ORTHO05D002724 3.1e-19 98.2 82 62.2
Lalb_Chr06g0167391 Lupinus albus HOM05D002403 ORTHO05D002724 5.3e-19 97.4 83 61.4
BcaB01g06220 Brassica carinata HOM05D002403 ORTHO05D002724 1.2e-18 96.3 74 70.3
Cpa.g.sc260.7 Carica papaya HOM05D002403 ORTHO05D002724 2.0e-18 95.5 84 61.9
BcaB01g06155 Brassica carinata HOM05D002403 ORTHO05D002724 2.7e-18 95.1 82 68.3
BcaNung07063 Brassica carinata HOM05D002403 ORTHO05D002724 2.7e-18 95.1 82 68.3
Lsat_1_v5_gn_3_61220 Lactuca sativa HOM05D002403 ORTHO05D002724 3.5e-18 94.7 77 63.6
Actinidia01493 Actinidia chinensis HOM05D002403 ORTHO05D002724 7.7e-18 93.6 79 62.0
MD12G1203100 Malus domestica HOM05D002403 ORTHO05D002724 2.2e-17 92.0 83 63.9
Pp3c27_7710 Physcomitrium patens HOM05D002403 ORTHO05D002724 2.2e-17 92.0 83 62.7
Mapoly0016s0142 Marchantia polymorpha HOM05D002403 ORTHO05D002724 6.5e-17 90.5 84 54.8
HanXRQChr10g0302411 Helianthus annuus HOM05D002403 ORTHO05D002724 1.5e-16 89.4 68 64.7
Migut.N00957 Erythranthe guttata HOM05D002403 ORTHO05D002724 9.4e-16 86.7 81 55.6
SalBow3G1703 Salvia bowleyana HOM05D002403 ORTHO05D002724 6.1e-15 84.0 81 56.8
SGA_v2.0_scaffold87G26959 Striga asiatica HOM05D002403 ORTHO05D051392 6.1e-15 84.0 83 61.4
SGA_v2.0_scaffold87G26965 Striga asiatica HOM05D002403 ORTHO05D002724 2.3e-14 82.0 83 60.2
SMO118G0322 Selaginella moellendorffii HOM05D002403 ORTHO05D002724 4.0e-14 81.3 82 57.3
SGA_v2.0_scaffold4G01983 Striga asiatica HOM05D002403 ORTHO05D002724 7.5e-13 77.0 82 58.5
SEGI_31808 Sequoiadendron giganteum HOM05D002403 ORTHO05D002724 3.7e-12 74.7 68 57.4
unitig_32.g11535 Utricularia gibba HOM05D002403 ORTHO05D002724 1.8e-11 72.4 81 51.9
BcaC02g12026 Brassica carinata HOM05D002403 ORTHO05D002724 2.7e-10 68.6 70 57.1
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 7.7e-10 67.0 59 59.3
C04p08830 Brassica napus HOM05D002403 ORTHO05D002724 3.8e-09 64.7 55 60.0
CBR_g28535 Chara braunii HOM05D002403 ORTHO05D002724 9.4e-08 60.1 81 45.7


User provided reference genes

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