Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.9e-57 224.9 110 100.0
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 4.4e-37 157.9 80 97.5
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 6.6e-33 144.1 100 67.0
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 8.6e-33 143.7 100 68.0
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 1.1e-32 143.3 100 68.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.1e-32 143.3 100 68.0
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 3.3e-32 141.7 100 69.0
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 3.3e-32 141.7 100 68.0
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 4.3e-32 141.4 100 67.0
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 4.3e-32 141.4 100 66.0
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 9.5e-32 140.2 94 70.2
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.6e-31 139.4 100 66.0
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.6e-31 139.4 100 66.0
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.6e-31 139.4 100 66.0
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.8e-31 138.7 100 67.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 2.8e-31 138.7 100 65.0
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 3.6e-31 138.3 94 71.3
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 3.6e-31 138.3 100 65.0
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 3.6e-31 138.3 100 64.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 3.6e-31 138.3 99 63.6
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 4.7e-31 137.9 100 65.0
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 4.7e-31 137.9 100 67.0
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.1e-31 137.1 100 65.0
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 8.1e-31 137.1 100 66.0
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 1.1e-30 136.7 99 62.6
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 1.1e-30 136.7 100 64.0
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.4e-30 136.3 99 66.7
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.8e-30 136.0 100 64.0
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 1.8e-30 136.0 100 64.0
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 2.3e-30 135.6 100 62.0
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.3e-30 135.6 100 66.0
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 3.1e-30 135.2 94 69.1
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 3.1e-30 135.2 94 69.1
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 5.2e-30 134.4 99 60.6
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 5.2e-30 134.4 100 62.0
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 8.9e-30 133.7 100 63.0
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 8.9e-30 133.7 100 66.0
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.2e-29 133.3 100 63.0
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.5e-29 132.9 100 64.0
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 2.6e-29 132.1 100 61.0
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 2.6e-29 132.1 94 67.0
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 4.4e-29 131.3 100 64.0
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 5.8e-29 131.0 98 63.3
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 5.8e-29 131.0 94 68.1
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 7.5e-29 130.6 100 63.0
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 7.5e-29 130.6 89 68.5
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 7.5e-29 130.6 94 66.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 1.7e-28 129.4 100 62.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 2.2e-28 129.0 90 68.9
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 2.9e-28 128.6 94 62.8
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.9e-28 128.6 94 62.8
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 2.9e-28 128.6 89 65.2
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 2.9e-28 128.6 94 67.0
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.7e-28 128.3 100 60.0
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 6.4e-28 127.5 94 62.8
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 8.3e-28 127.1 100 58.0
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 8.3e-28 127.1 99 59.6
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.1e-27 126.7 94 60.6
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.1e-27 126.7 100 59.0
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 1.1e-27 126.7 96 60.4
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 1.4e-27 126.3 100 59.0
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.4e-27 126.3 94 64.9
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.9e-27 125.9 100 61.0
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 1.9e-27 125.9 99 58.6
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.4e-27 125.6 99 56.6
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.2e-27 125.2 94 61.7
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 4.1e-27 124.8 94 61.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 4.1e-27 124.8 94 60.6
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 4.1e-27 124.8 100 58.0
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 4.1e-27 124.8 89 66.3
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 5.4e-27 124.4 94 61.7
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 5.4e-27 124.4 100 58.0
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 5.4e-27 124.4 100 58.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 5.4e-27 124.4 98 58.2
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.1e-27 124.0 94 61.7
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 7.1e-27 124.0 93 60.2
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.2e-26 123.2 100 62.0
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.2e-26 123.2 100 57.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.6e-26 122.9 94 58.5
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.6e-26 122.9 94 62.8
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 2.1e-26 122.5 100 59.0
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 2.7e-26 122.1 100 62.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 4.6e-26 121.3 94 59.6
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 4.6e-26 121.3 90 64.4
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.3e-25 119.0 97 60.8
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.3e-25 119.0 94 61.7
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 3.0e-25 118.6 94 58.5
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 3.0e-25 118.6 94 58.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 3.9e-25 118.2 93 61.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 3.9e-25 118.2 90 62.2
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 5.1e-25 117.9 94 58.5
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 6.6e-25 117.5 94 58.5
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 6.6e-25 117.5 94 58.5
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 6.6e-25 117.5 94 58.5
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.5e-24 116.3 89 60.7
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.5e-24 115.5 94 57.4
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.3e-24 115.2 84 64.3
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 4.3e-24 114.8 81 66.7
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 9.5e-24 113.6 86 59.3
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 2.8e-23 112.1 89 61.8
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 2.6e-21 105.5 84 59.5
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 7.6e-21 104.0 82 61.0
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 7.6e-21 104.0 77 59.7
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.1e-19 100.1 96 50.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 7.8e-18 94.0 100 46.0
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.3e-17 92.4 85 52.9
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.0e-17 92.0 89 48.3
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 5.6e-16 87.8 85 45.9
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 7.3e-16 87.4 63 63.5
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 2.1e-15 85.9 54 70.4
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.8e-14 82.8 61 59.0
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 6.0e-10 67.8 59 57.6


User provided reference genes

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