Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 1.2e-147 526.6 271 100.0
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 2.2e-90 336.3 319 56.1
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.4e-87 327.0 319 54.2
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 9.7e-86 320.9 319 54.2
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.7e-85 320.1 319 52.7
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 2.8e-85 319.3 319 52.7
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 4.8e-85 318.5 319 53.6
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.0e-83 313.2 319 53.0
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 3.4e-83 312.4 317 53.9
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 5.9e-83 311.6 316 53.2
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 7.7e-83 311.2 322 52.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.9e-82 309.3 321 53.0
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 2.9e-82 309.3 317 52.1
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 3.8e-82 308.9 319 51.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 3.8e-82 308.9 319 52.4
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 6.5e-82 308.1 319 52.0
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 6.5e-82 308.1 313 52.7
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 6.5e-82 308.1 317 52.7
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 8.5e-82 307.8 317 52.7
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 5.5e-81 305.1 317 49.5
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 5.5e-81 305.1 317 52.7
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 5.5e-81 305.1 316 51.3
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 7.2e-81 304.7 318 50.9
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 7.2e-81 304.7 319 52.4
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 3.6e-80 302.4 316 52.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 8.0e-80 301.2 319 51.7
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.0e-79 300.8 316 50.9
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 1.0e-79 300.8 317 50.5
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.3e-79 299.7 316 50.6
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 8.8e-79 297.7 316 50.3
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.1e-78 297.4 314 50.3
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 1.1e-78 297.4 314 50.3
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.5e-78 297.0 315 50.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 2.0e-78 296.6 317 50.2
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.6e-78 296.2 316 50.0
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.6e-78 296.2 314 50.3
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 4.4e-78 295.4 316 50.0
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 4.4e-78 295.4 316 50.0
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 5.7e-78 295.0 317 49.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 7.4e-78 294.7 317 49.5
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 9.7e-78 294.3 316 49.7
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 9.7e-78 294.3 316 49.7
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 1.7e-77 293.5 325 49.5
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 1.7e-77 293.5 317 51.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.8e-77 292.7 316 49.4
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 3.7e-77 292.4 319 52.0
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 4.8e-77 292.0 314 50.6
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 4.8e-77 292.0 317 51.1
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 8.2e-77 291.2 305 52.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 3.1e-76 289.3 314 50.0
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 5.3e-76 288.5 319 48.3
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 9.1e-76 287.7 318 49.1
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 1.2e-75 287.3 322 48.8
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 5.9e-75 285.0 308 50.0
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 1.3e-74 283.9 318 49.7
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.2e-74 283.1 318 50.0
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 2.2e-74 283.1 305 49.8
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 2.2e-74 283.1 319 49.8
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 5.0e-74 282.0 362 45.9
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 6.5e-74 281.6 319 47.3
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 1.5e-73 280.4 314 48.1
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.5e-73 280.4 318 49.4
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 1.9e-73 280.0 319 47.3
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 4.2e-73 278.9 319 49.8
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.1e-72 276.6 296 50.7
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 3.6e-72 275.8 289 53.6
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 3.6e-72 275.8 316 46.8
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 6.1e-72 275.0 306 49.7
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.4e-71 273.9 306 49.3
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 3.0e-71 272.7 323 48.0
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 5.2e-71 271.9 282 50.7
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 6.7e-71 271.6 304 48.4
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.6e-70 269.6 320 45.6
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 4.4e-70 268.9 309 46.3
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 9.7e-70 267.7 307 48.9
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.7e-69 266.9 305 46.6
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 8.2e-69 264.6 320 48.8
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 4.2e-65 252.3 316 42.1
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.1e-64 250.0 319 46.7
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 8.0e-64 248.1 270 50.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 3.0e-63 246.1 336 43.5
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 4.4e-62 242.3 299 46.5
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.2e-61 240.0 305 44.6
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.4e-60 236.5 317 42.9
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.2e-59 234.2 290 45.2
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 7.7e-59 231.5 316 42.7
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-58 231.1 340 43.5
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 4.2e-57 225.7 322 38.8
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.4e-54 215.7 271 47.2
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.4e-54 215.7 271 47.2
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.4e-52 210.7 243 47.3
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 4.1e-52 209.1 225 50.7
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.7e-51 206.5 158 66.5
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 5.0e-50 202.2 316 39.6
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.6e-50 201.8 303 35.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.1e-49 201.1 256 44.5
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.8e-47 193.7 156 61.5
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.6e-46 189.9 265 43.4
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 3.7e-45 186.0 217 47.9
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.2e-43 181.0 202 49.0
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 3.5e-43 179.5 257 45.5
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.2e-39 165.6 316 33.2
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.3e-31 140.2 128 55.5
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.8e-31 138.7 225 38.7
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 1.3e-29 134.4 103 64.1
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.6e-27 127.5 202 38.6
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 5.8e-22 109.0 330 29.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.7e-19 100.1 111 47.7
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 6.9e-15 85.5 152 36.8
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.2e-14 84.7 184 36.4
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 2.2e-13 80.5 70 57.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.9e-13 79.3 88 46.6
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 3.9e-10 69.7 108 37.0
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.4e-06 56.6 72 38.9


User provided reference genes

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