Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 1.3e-216 756.1 379 100.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.0e-153 546.2 382 67.8
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.2e-152 542.7 382 67.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.1e-149 531.6 373 67.0
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 6.2e-147 524.6 382 63.6
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 8.9e-146 520.8 381 62.5
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 5.8e-145 518.1 371 64.7
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.3e-144 516.9 383 63.2
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 2.4e-143 512.7 371 66.6
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.2e-143 512.3 388 62.4
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 5.4e-143 511.5 387 62.5
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 7.1e-143 511.1 386 62.7
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 1.2e-142 510.4 382 62.6
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.2e-142 510.4 381 61.4
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 3.5e-142 508.8 383 62.4
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.0e-141 507.3 382 62.6
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.0e-141 507.3 390 60.3
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 3.0e-141 505.8 379 66.8
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 5.1e-141 505.0 370 64.3
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 8.6e-141 504.2 384 65.4
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.5e-140 503.4 387 61.2
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.9e-140 503.1 384 62.0
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.5e-140 502.7 387 61.8
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 2.5e-140 502.7 389 60.7
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 2.5e-140 502.7 388 61.1
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.3e-140 501.9 384 64.6
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 2.1e-139 499.6 384 60.4
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 2.1e-139 499.6 384 60.4
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 2.8e-139 499.2 369 63.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 2.8e-139 499.2 369 63.1
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 6.2e-139 498.0 385 60.8
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 6.9e-138 494.6 388 60.8
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.2e-137 493.8 391 61.1
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 1.5e-137 493.4 392 60.7
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 3.4e-137 492.3 417 57.8
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.3e-136 490.3 377 66.0
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.2e-136 489.6 384 62.8
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 8.4e-136 487.6 385 63.4
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.9e-135 486.5 387 63.8
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.2e-135 485.7 391 59.6
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 5.4e-135 485.0 383 60.6
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 9.3e-135 484.2 395 60.0
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 9.3e-135 484.2 382 61.8
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 9.3e-135 484.2 385 63.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 1.6e-134 483.4 387 58.9
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 2.1e-134 483.0 372 64.0
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.1e-134 483.0 388 59.8
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 2.7e-134 482.6 381 59.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 6.0e-134 481.5 389 61.7
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 7.8e-134 481.1 376 59.6
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 7.8e-134 481.1 380 60.8
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 3.0e-133 479.2 375 65.1
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 5.1e-133 478.4 378 61.4
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 6.6e-133 478.0 431 54.5
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 6.6e-133 478.0 384 60.2
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 8.7e-133 477.6 383 58.7
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.1e-132 477.2 380 60.3
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 1.9e-132 476.5 390 59.7
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 5.6e-132 474.9 388 61.9
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 5.6e-132 474.9 378 62.4
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 2.8e-131 472.6 341 65.4
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.1e-130 470.7 387 61.5
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.4e-130 469.5 384 61.7
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 9.9e-129 464.2 382 57.3
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 4.9e-128 461.8 385 57.7
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 6.4e-128 461.5 385 57.1
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.4e-127 459.5 377 62.3
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 4.2e-127 458.8 370 60.8
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 3.5e-126 455.7 382 61.5
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 6.0e-126 454.9 385 59.0
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 7.9e-126 454.5 443 52.6
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 8.7e-125 451.1 338 64.2
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.9e-124 449.9 383 56.7
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 2.5e-124 449.5 383 57.2
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 5.6e-124 448.4 388 56.7
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.3e-123 447.2 384 57.0
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.6e-123 446.8 382 56.0
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 4.8e-123 445.3 381 57.5
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.8e-123 445.3 383 58.2
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 4.8e-123 445.3 408 55.1
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 8.1e-123 444.5 381 58.0
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 4.5e-121 438.7 341 60.7
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 4.9e-120 435.3 374 57.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 8.4e-120 434.5 388 56.7
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 4.2e-119 432.2 386 57.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 2.1e-118 429.9 381 59.1
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.8e-117 426.8 427 52.9
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.3e-117 426.4 388 57.2
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 3.0e-117 426.0 332 59.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 6.7e-117 424.9 386 57.3
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.1e-116 424.1 405 53.6
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.5e-116 423.7 388 57.0
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 2.0e-113 413.3 392 52.6
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 3.4e-113 412.5 385 54.0
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 3.4e-113 412.5 384 54.7
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 7.6e-113 411.4 382 54.7
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 2.2e-112 409.8 390 51.8
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 4.9e-112 408.7 383 54.6
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 3.2e-111 406.0 340 60.9
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 5.1e-109 398.7 391 53.2
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.3e-108 396.0 414 50.7
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 9.7e-108 394.4 388 52.3
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.4e-106 390.6 383 52.0
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 3.1e-106 389.4 297 62.3
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 6.9e-106 388.3 383 49.6
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.5e-105 387.1 383 51.7
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 5.1e-93 345.5 263 65.4
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 4.4e-92 342.4 252 66.3
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 8.5e-88 328.2 382 48.4
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.1e-84 317.8 345 49.3
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 7.4e-84 315.1 377 47.5
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 5.3e-82 308.9 378 45.0
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.2e-81 307.8 236 66.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 1.0e-80 304.7 220 64.1
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 2.7e-73 280.0 198 64.6
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 2.9e-72 276.6 275 49.5
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 8.0e-70 268.5 298 47.0
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 3.0e-61 240.0 304 43.8
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 3.0e-61 240.0 173 64.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 3.6e-54 216.5 233 44.2
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 3.6e-54 216.5 190 62.6
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 4.4e-52 209.5 152 62.5
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 2.0e-49 200.7 355 35.8
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 1.1e-47 194.9 166 57.8
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 6.0e-33 146.0 343 31.5
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 1.7e-32 144.4 116 58.6
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.5e-31 140.6 347 29.1
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 5.6e-31 139.4 121 55.4
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.1e-25 120.9 159 41.5
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.5e-17 93.6 177 37.3
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 5.1e-16 89.7 65 64.6
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-14 84.3 154 33.8
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-12 76.3 69 47.8
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 5.1e-08 63.2 68 47.1
CSS0009653 Camellia sinensis var. sinensis HOM05D004669 ORTHO05D005767 8.1e-06 55.8 272 22.1


User provided reference genes

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