Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 9.7e-104 380.2 195 100.0
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 8.3e-71 270.8 196 74.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.7e-68 263.1 193 72.0
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 2.8e-66 255.8 181 71.3
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.8e-65 253.1 195 68.2
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 2.3e-65 252.7 186 70.4
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.0e-65 252.3 195 68.2
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 6.8e-65 251.1 195 69.7
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 2.0e-64 249.6 195 68.7
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.4e-64 248.4 195 67.2
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 7.5e-64 247.7 194 67.0
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.2e-63 246.1 192 67.7
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 2.9e-63 245.7 192 68.2
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 4.9e-63 245.0 192 68.2
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 6.4e-63 244.6 183 69.9
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 8.3e-63 244.2 195 67.2
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.4e-62 242.7 195 67.7
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.0e-61 239.6 192 67.2
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 5.9e-61 238.0 195 65.6
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.7e-60 236.5 193 64.8
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 5.0e-60 235.0 185 67.6
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.9e-59 233.0 195 64.6
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 2.5e-59 232.6 201 61.7
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.5e-59 232.6 222 59.9
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 3.3e-59 232.3 189 64.0
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 4.3e-59 231.9 190 67.4
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 7.3e-59 231.1 203 61.6
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.6e-58 229.9 167 71.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 6.2e-58 228.0 193 65.8
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 8.0e-58 227.6 191 62.3
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 1.1e-57 227.3 179 67.0
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.4e-57 226.9 192 63.5
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 1.4e-57 226.9 204 63.2
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.8e-57 226.5 209 63.2
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 1.8e-57 226.5 179 65.4
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 2.3e-57 226.1 190 65.8
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 3.1e-57 225.7 190 61.6
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 4.0e-57 225.3 178 65.7
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 4.0e-57 225.3 191 61.3
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.2e-56 223.8 179 63.7
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 1.2e-56 223.8 194 61.3
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 1.2e-56 223.8 202 58.4
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.5e-56 223.4 202 58.4
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.5e-56 223.4 178 65.2
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.6e-56 222.6 185 65.4
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 2.6e-56 222.6 192 63.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 3.4e-56 222.2 179 64.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 3.4e-56 222.2 196 61.2
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 3.4e-56 222.2 192 62.5
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 3.4e-56 222.2 191 62.8
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 3.4e-56 222.2 191 62.8
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 4.4e-56 221.9 181 63.5
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 5.8e-56 221.5 190 60.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 5.8e-56 221.5 183 66.7
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 7.5e-56 221.1 176 65.3
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 9.8e-56 220.7 207 58.9
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 9.8e-56 220.7 195 62.1
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.7e-55 219.9 200 62.5
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 2.2e-55 219.5 161 70.2
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 2.2e-55 219.5 215 59.1
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 6.4e-55 218.0 172 64.5
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 8.3e-55 217.6 180 63.3
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-54 217.2 161 70.2
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-54 217.2 158 70.9
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.9e-54 216.5 193 61.1
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 2.4e-54 216.1 184 61.4
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 3.2e-54 215.7 182 62.1
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 3.2e-54 215.7 183 62.8
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.2e-54 215.7 190 61.1
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 4.1e-54 215.3 176 63.1
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 4.1e-54 215.3 182 62.1
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 5.4e-54 214.9 196 58.7
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 5.4e-54 214.9 176 63.6
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 7.0e-54 214.5 176 63.1
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 7.0e-54 214.5 182 61.5
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 1.2e-53 213.8 187 60.4
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.2e-53 213.8 176 62.5
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.5e-53 212.2 150 72.0
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 6.0e-53 211.5 193 58.5
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 6.0e-53 211.5 147 76.2
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.5e-51 206.8 170 65.9
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.6e-50 203.4 188 59.0
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 3.6e-50 202.2 156 67.9
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 8.1e-50 201.1 178 60.7
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.1e-49 199.1 160 66.9
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 8.9e-49 197.6 198 58.1
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.9e-49 197.6 147 68.7
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 2.0e-48 196.4 146 69.9
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 5.8e-48 194.9 154 66.9
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 5.8e-48 194.9 157 63.1
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 9.9e-48 194.1 157 64.3
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.9e-47 192.6 151 67.5
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 6.4e-47 191.4 158 65.2
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 1.2e-45 187.2 183 53.6
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 2.7e-45 186.0 156 62.8
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 7.8e-45 184.5 191 53.4
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.3e-44 183.7 192 54.2
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 3.3e-43 179.1 165 58.2
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.4e-38 162.9 188 50.0
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 2.7e-37 159.5 173 48.6
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 2.8e-34 149.4 193 45.1
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.4e-33 147.1 124 65.3
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 9.3e-30 134.4 184 44.0
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.2e-29 134.0 104 66.3
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 1.0e-28 131.0 184 46.7
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.9e-27 126.7 160 51.9
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 9.0e-25 117.9 105 61.0
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.5e-24 117.1 176 43.2
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 2.2e-23 113.2 89 64.0
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.4e-22 110.5 81 71.6
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.9e-22 110.2 88 67.0
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 4.3e-19 99.0 236 31.8
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 2.8e-18 96.3 82 62.2
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.5e-16 89.0 84 58.3
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.6e-16 88.2 74 64.9
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.4e-14 84.0 99 54.5
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 9.3e-14 81.3 67 59.7
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 2.3e-12 76.6 58 67.2
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.3e-12 76.6 72 52.8
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.1e-09 66.2 85 49.4
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.6e-08 61.6 95 36.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.9e-07 59.7 55 52.7
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 8.4e-07 58.2 231 28.1


User provided reference genes

Program Settings