Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0297 Ceratophyllum demersum HOM05D039314 ORTHO05D034252 5.8e-283 976.9 481 100.0
CDE08G0177 Ceratophyllum demersum HOM05D039314 ORTHO05D034252 1.7e-141 506.9 254 99.6
CDE02G0096 Ceratophyllum demersum HOM05D039314 ORTHO05D034252 2.2e-96 357.1 350 60.9
CDE02G2237 Ceratophyllum demersum HOM05D001447 ORTHO05D000215 1.6e-94 350.9 186 92.5
TAR600G0001 Trochodendron aralioides HOM05D000345 ORTHO05D000215 1.0e-16 92.4 179 36.3
CDE09G0160 Ceratophyllum demersum HOM05D000345 ORTHO05D000215 1.9e-15 88.2 263 29.7
TWI38G1929 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 2.5e-15 87.8 242 31.4
Nn1g09015 Nelumbo nucifera HOM05D000345 ORTHO05D000215 3.5e-14 84.0 231 31.2
TAR629G1195 Trochodendron aralioides HOM05D000345 ORTHO05D000215 4.6e-14 83.6 230 31.7
Gohir.A04G037900 Gossypium hirsutum HOM05D000345 ORTHO05D000215 7.9e-14 82.8 203 31.0
TWI38G2373 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 7.9e-14 82.8 247 30.0
Aqoxy1G02192 Aquilegia oxysepala HOM05D000345 ORTHO05D000215 1.0e-13 82.4 190 33.7
Dinv14964 Davidia involucrata HOM05D000345 ORTHO05D000215 2.3e-13 81.3 231 32.9
Gohir.D05G345000 Gossypium hirsutum HOM05D000345 ORTHO05D000215 2.3e-13 81.3 203 31.5
Gorai.009G373000 Gossypium raimondii HOM05D000345 ORTHO05D000215 3.0e-13 80.9 203 31.5
CDE02G2096 Ceratophyllum demersum HOM05D000345 ORTHO05D000215 3.9e-13 80.5 252 29.0
TAR626G1280 Trochodendron aralioides HOM05D000345 ORTHO05D000215 3.9e-13 80.5 182 33.5
Ca_23065_v3 Cicer arietinum L. HOM05D000345 ORTHO05D000215 5.1e-13 80.1 194 33.5
Lj1P834T10 Lonicera japonica HOM05D000345 ORTHO05D000215 5.1e-13 80.1 186 35.5
TWI39G0392 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 1.5e-12 78.6 248 29.4
Haze_09358 Corylus avellana HOM05D000345 ORTHO05D000215 1.9e-12 78.2 245 31.4
Phvul.011G156900 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 2.5e-12 77.8 172 34.3
Cfa019602 Carpinus fangiana HOM05D000345 ORTHO05D000215 4.3e-12 77.0 245 32.7
Oeu061339.1 Olea europaea HOM05D000345 ORTHO05D000215 4.3e-12 77.0 239 31.4
CsaV3_4G008400 Cucumis sativus L. HOM05D000345 ORTHO05D000215 7.4e-12 76.3 235 31.9
MELO3C016092.2 Cucumis melo HOM05D000345 ORTHO05D000215 9.6e-12 75.9 235 31.5
QL08p027336 Quercus lobata HOM05D000345 ORTHO05D000215 9.6e-12 75.9 221 31.7
VMungo1127G1813 Vigna mungo HOM05D000345 ORTHO05D000215 1.3e-11 75.5 171 36.3
Dinv18340 Davidia involucrata HOM05D000345 ORTHO05D000215 2.1e-11 74.7 227 30.8
MBI07_g17041_MAGBIO Magnolia biondii HOM05D000345 ORTHO05D000215 2.1e-11 74.7 228 30.7
Sed0019524 Sechium edule HOM05D000345 ORTHO05D000215 2.8e-11 74.3 263 31.2
ClCG11G017590 Citrullus lanatus HOM05D000345 ORTHO05D000215 3.7e-11 73.9 248 28.6
ClCG07G009950 Citrullus lanatus HOM05D000345 ORTHO05D000215 1.4e-10 72.0 218 32.6
Sc16g0007400 Simmondsia chinensis HOM05D000345 ORTHO05D000215 2.4e-10 71.2 202 33.7
CiPaw.12G114900 Carya illinoinensis HOM05D000345 ORTHO05D000215 3.1e-10 70.9 249 31.3
Glyma.12G158900 Glycine max HOM05D000345 ORTHO05D000215 9.0e-10 69.3 178 33.7
Sed0009838 Sechium edule HOM05D000345 ORTHO05D000215 9.0e-10 69.3 185 34.6
TWI23G0182 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 9.0e-10 69.3 188 32.4
Sed0011423 Sechium edule HOM05D000345 ORTHO05D000215 1.2e-09 68.9 227 29.1
HPP92_020028 Vanilla planifolia HOM05D000345 ORTHO05D000215 1.2e-09 68.9 163 33.7
CsaV3_4G033270 Cucumis sativus L. HOM05D000345 ORTHO05D000215 1.5e-09 68.6 208 30.8
Glyma.12G208800 Glycine max HOM05D000345 ORTHO05D000215 2.6e-09 67.8 171 35.1
Manes.15G091000 Manihot esculenta HOM05D000345 ORTHO05D000215 5.9e-09 66.6 223 29.1
Carub.0003s1467 Capsella rubella HOM05D000345 ORTHO05D000215 7.6e-09 66.2 245 31.0
Duzib268G0183 Durio zibethinus HOM05D000345 ORTHO05D000215 7.6e-09 66.2 221 28.1
MELO3C025629.2 Cucumis melo HOM05D000345 ORTHO05D000215 1.0e-08 65.9 208 30.3
Hma1.2p1_0688F.1_g203650 Hydrangea macrophylla HOM05D000345 ORTHO05D000215 1.0e-08 65.9 210 29.0
MSTRG.6808 Avicennia marina HOM05D000345 ORTHO05D000215 1.3e-08 65.5 226 29.2
Glyma.06G232300 Glycine max HOM05D000345 ORTHO05D000215 1.3e-08 65.5 180 31.1
Glyma.13G292500 Glycine max HOM05D000345 ORTHO05D000215 1.3e-08 65.5 177 33.9
SalBow7G4065 Salvia bowleyana HOM05D000345 ORTHO05D000215 1.3e-08 65.5 169 32.0
SalBow7G4311 Salvia bowleyana HOM05D000345 ORTHO05D000215 1.3e-08 65.5 169 32.0
MD03G1239100 Malus domestica HOM05D000345 ORTHO05D000215 1.7e-08 65.1 214 28.0
Prupe.4G171100 Prunus persica HOM05D000345 ORTHO05D000215 1.7e-08 65.1 247 28.3
SHI21555 Sapria himalayana HOM05D000345 ORTHO05D000215 1.7e-08 65.1 170 32.9
Duzib170G0508 Durio zibethinus HOM05D000345 ORTHO05D000215 2.2e-08 64.7 208 31.2
Lsat_1_v5_gn_9_99020 Lactuca sativa HOM05D000345 ORTHO05D000215 2.9e-08 64.3 198 31.8
SalBow8G0709 Salvia bowleyana HOM05D000345 ORTHO05D000215 3.8e-08 63.9 162 33.3
VMungo1080G1016 Vigna mungo HOM05D000345 ORTHO05D000215 3.8e-08 63.9 249 28.5
Hma1.2p1_0002F.1_g002600 Hydrangea macrophylla HOM05D000345 ORTHO05D000215 6.5e-08 63.2 177 29.9
Potri.011G096600 Populus trichocarpa HOM05D000345 ORTHO05D000215 6.5e-08 63.2 209 29.2
SalBow8G5341 Salvia bowleyana HOM05D000345 ORTHO05D000215 1.1e-07 62.4 160 32.5
A05p34390 Brassica napus HOM05D000345 ORTHO05D000215 1.4e-07 62.0 169 34.3
CSS0020622 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 1.4e-07 62.0 233 29.2
Phvul.005G097200 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 1.4e-07 62.0 167 32.9
Potri.001G375800 Populus trichocarpa HOM05D000345 ORTHO05D000215 1.9e-07 61.6 229 27.5
Gohir.D13G152900 Gossypium hirsutum HOM05D000345 ORTHO05D000215 3.2e-07 60.8 202 28.2
Gorai.013G172800 Gossypium raimondii HOM05D000345 ORTHO05D000215 3.2e-07 60.8 202 28.2
Oeu051103.1 Olea europaea HOM05D000345 ORTHO05D000215 3.2e-07 60.8 239 28.0
Potri.019G091300 Populus trichocarpa HOM05D000345 ORTHO05D000215 3.2e-07 60.8 188 31.9
Sp3g13230 Schrenkiella parvula HOM05D000345 ORTHO05D000215 5.5e-07 60.1 199 29.6
Actinidia18788 Actinidia chinensis HOM05D000345 ORTHO05D000215 7.2e-07 59.7 173 31.8
Potri.013G119400 Populus trichocarpa HOM05D000345 ORTHO05D000215 7.2e-07 59.7 204 28.9
Sabra19G0104600 Salix brachista HOM05D000345 ORTHO05D000215 7.2e-07 59.7 187 30.5
MSTRG.14951 Avicennia marina HOM05D000345 ORTHO05D000215 9.3e-07 59.3 206 26.7
Gohir.A13G148300 Gossypium hirsutum HOM05D000345 ORTHO05D000215 1.2e-06 58.9 202 28.7
PGR083G2181 Punica granatum HOM05D000345 ORTHO05D000215 1.2e-06 58.9 196 31.1
SGA_v2.0_scaffold130G34330 Striga asiatica HOM05D000345 ORTHO05D000215 1.2e-06 58.9 173 32.9
A01p38900 Brassica napus HOM05D000345 ORTHO05D000215 1.6e-06 58.5 223 28.3
Oeu025346.1 Olea europaea HOM05D000345 ORTHO05D000215 1.6e-06 58.5 227 29.5
A03p39100 Brassica napus HOM05D000345 ORTHO05D000215 2.1e-06 58.2 179 30.7
BraA03t13059Z Brassica rapa HOM05D000345 ORTHO05D000215 2.1e-06 58.2 179 30.7
DCAR_021280 Daucus carota HOM05D000345 ORTHO05D000215 2.1e-06 58.2 216 27.3
Eucgr.F01204 Eucalyptus grandis HOM05D000345 ORTHO05D000215 2.1e-06 58.2 184 28.3
AT3G15030 Arabidopsis thaliana HOM05D000345 ORTHO05D000215 4.6e-06 57.0 197 29.4
Gorai.002G064500 Gossypium raimondii HOM05D000345 ORTHO05D000215 4.6e-06 57.0 224 25.0
Psat4g170920 Pisum sativum HOM05D000345 ORTHO05D000215 4.6e-06 57.0 232 28.0
TAR624G1099 Trochodendron aralioides HOM05D000345 ORTHO05D000215 4.6e-06 57.0 112 34.8
unitig_85.g27412 Utricularia gibba HOM05D000345 ORTHO05D000215 4.6e-06 57.0 156 30.8
Lalb_Chr03g0029831 Lupinus albus HOM05D000345 ORTHO05D000215 6.1e-06 56.6 126 32.5
BraA01t03936Z Brassica rapa HOM05D000345 ORTHO05D000215 7.9e-06 56.2 215 29.3


User provided reference genes

Program Settings