Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 2.1e-158 562.4 294 100.0
CDE06G2195 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 3.0e-56 223.0 125 87.2
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 6.5e-43 178.7 124 83.1
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.3e-31 139.8 227 41.9
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 3.7e-30 136.3 298 36.6
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 6.3e-30 135.6 223 41.7
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 6.3e-30 135.6 240 41.2
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 3.8e-27 126.3 222 40.5
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 3.8e-27 126.3 245 40.0
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 7.2e-26 122.1 237 37.6
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 7.2e-26 122.1 241 38.2
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 1.0e-24 118.2 242 38.0
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.0e-24 118.2 220 40.9
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 2.3e-24 117.1 230 37.4
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 3.0e-24 116.7 212 39.2
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 8.8e-24 115.2 228 39.0
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 8.8e-24 115.2 259 35.1
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.8e-24 115.2 251 37.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 8.8e-24 115.2 211 39.3
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 8.8e-24 115.2 279 35.1
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-23 114.4 224 37.1
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 4.4e-23 112.8 225 37.8
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 9.7e-23 111.7 209 39.2
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 9.7e-23 111.7 224 37.1
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 9.7e-23 111.7 250 37.6
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-22 111.3 224 38.4
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-22 111.3 224 38.4
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 2.8e-22 110.2 223 39.5
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.8e-22 110.2 216 36.1
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.8e-22 109.4 225 36.9
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 8.2e-22 108.6 220 38.2
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 8.2e-22 108.6 207 40.1
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.8e-21 107.5 217 35.0
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 3.1e-21 106.7 242 38.0
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 4.1e-21 106.3 200 41.5
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 4.1e-21 106.3 216 37.0
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 4.1e-21 106.3 238 34.0
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 4.1e-21 106.3 250 36.8
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 5.3e-21 105.9 202 41.1
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 6.9e-21 105.5 214 36.4
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 9.1e-21 105.1 215 38.1
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.2e-20 104.8 227 38.8
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.2e-20 104.8 211 38.4
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.2e-20 104.8 211 38.4
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.5e-20 104.4 223 35.4
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 2.6e-20 103.6 118 50.0
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 3.4e-20 103.2 212 38.2
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 5.9e-20 102.4 201 39.3
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 5.9e-20 102.4 221 37.6
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.9e-20 102.4 282 33.0
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.0e-19 101.7 200 39.5
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.7e-19 100.9 203 38.4
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.2e-19 100.5 228 38.6
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.2e-19 100.5 104 56.7
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 6.5e-19 99.0 217 35.9
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.1e-18 98.2 265 30.2
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.1e-18 98.2 137 46.7
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.9e-18 97.4 106 52.8
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 3.2e-18 96.7 220 40.0
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 4.2e-18 96.3 287 33.1
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 4.2e-18 96.3 87 59.8
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 7.2e-18 95.5 129 47.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 7.2e-18 95.5 200 36.5
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.2e-17 94.7 106 51.9
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.1e-17 94.0 242 36.4
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 4.7e-17 92.8 274 32.5
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 4.7e-17 92.8 124 49.2
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 4.7e-17 92.8 137 43.8
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 6.1e-17 92.4 106 50.0
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 6.1e-17 92.4 129 43.4
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 7.9e-17 92.0 106 50.0
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 1.0e-16 91.7 214 36.0
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.0e-16 91.7 109 52.3
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.8e-16 90.9 234 34.2
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.3e-16 90.5 105 53.3
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 5.2e-16 89.4 82 59.8
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 6.7e-16 89.0 236 33.1
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.1e-15 88.2 123 45.5
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 2.6e-15 87.0 125 44.0
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 3.3e-15 86.7 101 51.5
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 5.7e-15 85.9 84 57.1
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 5.7e-15 85.9 101 50.5
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 7.4e-15 85.5 116 48.3
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 9.7e-15 85.1 105 50.5
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.7e-14 84.3 134 41.0
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.7e-14 84.3 71 66.2
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.2e-14 84.0 124 41.9
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 4.8e-14 82.8 84 56.0
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 4.8e-14 82.8 84 56.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 4.8e-14 82.8 215 31.6
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.1e-13 81.6 75 62.7
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 2.4e-13 80.5 100 49.0
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 5.3e-13 79.3 226 31.0
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 5.3e-13 79.3 81 58.0
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 9.1e-13 78.6 84 52.4
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 4.5e-12 76.3 81 54.3
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 3.8e-11 73.2 92 46.7
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.1e-10 71.6 126 39.7
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.5e-10 71.2 106 42.5
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 5.5e-10 69.3 199 33.2
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 1.2e-09 68.2 156 32.7
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 1.2e-09 68.2 72 55.6
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 1.6e-09 67.8 221 33.0
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.6e-09 67.8 105 41.9
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 3.6e-09 66.6 122 40.2
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 4.7e-09 66.2 178 33.1
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 1.8e-08 64.3 283 26.5
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 1.8e-08 64.3 119 39.5
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 3.0e-08 63.5 113 38.9
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 8.8e-08 62.0 78 48.7
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 1.2e-07 61.6 100 39.0
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 2.6e-07 60.5 106 39.6
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 3.3e-07 60.1 78 47.4
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.7e-06 57.8 198 28.8
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 4.8e-06 56.2 149 30.9
Zm00001eb133640 Zea mays HOM05D001459 ORTHO05D001359 4.8e-06 56.2 115 36.5
CDE08G1266 Ceratophyllum demersum HOM05D000077 ORTHO05D006716 6.3e-06 55.8 27 85.2
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 6.3e-06 55.8 123 35.0
TPR.G10365 Trifolium pratense HOM05D001459 ORTHO05D001359 8.2e-06 55.5 88 42.0


User provided reference genes

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