Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 0.0e+00 1402.9 677 100.0
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 1.1e-234 817.0 626 63.6
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 8.3e-227 790.8 618 61.3
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 1.1e-226 790.4 623 61.5
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 1.9e-223 779.6 673 58.2
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.2e-223 778.5 691 56.7
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 1.6e-222 776.5 690 57.2
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 1.4e-221 773.5 666 58.0
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 1.8e-221 773.1 692 56.5
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 1.8e-221 773.1 588 62.1
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 6.8e-221 771.2 588 62.1
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 1.2e-220 770.4 646 57.7
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 5.7e-220 768.1 696 55.5
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 7.5e-220 767.7 706 54.1
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 4.9e-219 765.0 606 62.2
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 1.1e-218 763.8 594 60.1
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 1.1e-218 763.8 637 58.4
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 2.4e-218 762.7 654 57.8
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 4.1e-218 761.9 655 57.7
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 5.4e-218 761.5 687 55.9
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 9.2e-218 760.8 704 55.7
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.6e-217 760.0 702 54.4
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 3.5e-217 758.8 707 54.9
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 1.0e-216 757.3 589 61.3
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 1.7e-216 756.5 592 62.0
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 2.3e-216 756.1 672 56.1
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 6.6e-216 754.6 592 60.3
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 4.3e-215 751.9 646 56.5
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 5.6e-215 751.5 710 54.6
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 7.3e-215 751.1 613 60.0
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 8.0e-214 747.7 660 57.0
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 1.0e-213 747.3 605 59.7
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.5e-212 743.4 592 59.8
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.5e-212 743.4 603 58.5
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 2.6e-212 742.7 693 53.5
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.7e-211 740.0 582 59.6
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.2e-211 739.6 580 59.7
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 4.9e-211 738.4 582 59.6
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 4.9e-211 738.4 598 58.5
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 6.4e-211 738.0 611 58.1
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 1.1e-210 737.3 658 55.6
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 1.8e-210 736.5 689 54.3
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 3.2e-210 735.7 699 54.9
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 4.6e-209 731.9 619 58.3
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 6.0e-209 731.5 688 52.9
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 3.9e-208 728.8 711 52.0
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.1e-207 727.2 593 59.2
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 3.3e-207 725.7 703 53.3
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 1.8e-205 719.9 673 53.9
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 1.8e-205 719.9 669 53.7
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 3.2e-202 709.1 637 54.9
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.8e-197 693.3 670 52.7
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 1.8e-197 693.3 590 58.1
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 2.3e-197 693.0 595 56.3
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.8e-197 691.4 670 52.5
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 6.8e-197 691.4 613 56.1
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.6e-196 689.5 668 51.9
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.4e-196 688.7 669 52.0
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 7.5e-196 688.0 670 51.9
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 3.7e-195 685.6 551 59.7
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 6.4e-195 684.9 539 59.9
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 1.4e-194 683.7 694 51.7
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 7.1e-194 681.4 697 50.9
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 2.1e-193 679.9 691 51.4
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 4.6e-193 678.7 597 55.3
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 5.1e-192 675.2 596 54.2
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 4.3e-191 672.2 695 51.2
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 1.6e-190 670.2 531 59.1
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 3.6e-190 669.1 601 55.6
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 8.1e-190 667.9 603 54.7
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 1.4e-189 667.2 601 55.6
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 9.9e-188 661.0 567 55.2
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 1.3e-187 660.6 544 58.6
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 3.8e-187 659.1 600 55.2
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 4.9e-187 658.7 608 53.9
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 2.7e-185 652.9 687 52.0
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 6.6e-184 648.3 597 54.1
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.1e-183 647.5 602 53.8
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.5e-183 647.1 526 58.4
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 3.3e-183 646.0 608 51.6
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.3e-183 646.0 600 53.5
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 3.6e-182 642.5 666 50.5
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 3.1e-181 639.4 600 52.0
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 2.6e-180 636.3 713 48.1
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 2.6e-180 636.3 713 48.1
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 5.8e-180 635.2 598 52.7
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 3.8e-179 632.5 708 47.5
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 1.9e-178 630.2 634 51.4
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 9.3e-178 627.9 608 52.1
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 2.7e-177 626.3 624 51.0
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 6.0e-177 625.2 680 49.4
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 6.0e-177 625.2 680 49.4
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 1.3e-176 624.0 673 49.0
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 5.1e-176 622.1 677 49.3
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 1.9e-175 620.2 712 47.5
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 2.8e-174 616.3 608 50.7
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 1.1e-173 614.4 609 51.1
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 5.3e-173 612.1 613 50.7
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.5e-172 610.5 479 59.5
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 2.9e-171 606.3 706 46.2
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 1.6e-169 600.5 708 46.0
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 4.5e-164 582.4 676 47.0
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 7.6e-156 555.1 454 55.3
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.5e-154 550.1 497 53.3
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 6.0e-153 545.4 627 45.6
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 3.9e-128 463.0 387 56.3
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 1.3e-110 404.8 384 50.8
C09p41240 Brassica napus HOM05D005963 ORTHO05D006869 1.5e-82 311.6 403 43.9
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 8.4e-62 242.7 288 42.0
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 1.3e-49 202.2 364 33.5
MBI05_g12586_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 9.0e-48 196.1 188 55.9
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.4e-37 162.2 362 31.2
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.9e-37 161.8 362 31.5
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.3e-35 155.6 362 30.9
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.3e-35 155.6 362 30.9
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 4.1e-32 144.1 385 27.3
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 6.9e-32 143.3 309 31.7
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 3.4e-31 141.0 137 53.3
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 1.0e-30 139.4 385 29.6
Glyma.16G201100 Glycine max HOM05D005963 ORTHO05D006869 1.9e-29 135.2 243 40.7
ATR0661G452 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.8e-25 121.3 101 54.5
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 2.5e-21 108.2 111 51.4
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 4.1e-16 90.9 376 26.3
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 7.0e-16 90.1 408 26.0
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.7e-14 85.5 364 22.8
Atru.chr1.581 Acer truncatum HOM05D005963 ORTHO05D006869 6.7e-11 73.6 82 48.8
Cre01.g041800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 4.8e-09 67.4 304 23.7
Cre02.g095117 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 6.3e-09 67.0 306 23.2
Cre08.g380452 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 7.0e-08 63.5 294 23.1
SMO116G0125 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 7.0e-08 63.5 285 23.5


User provided reference genes

Program Settings