Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.0e-93 345.1 171 100.0
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.8e-61 239.6 128 95.3
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 6.4e-51 204.5 140 77.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 3.1e-45 185.7 121 76.9
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 5.2e-45 184.9 121 76.9
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 5.2e-45 184.9 121 76.9
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 8.9e-45 184.1 121 76.9
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 1.3e-43 180.3 121 71.9
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.3e-43 180.3 121 75.2
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.7e-43 179.9 121 74.4
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 8.4e-43 177.6 121 73.6
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.1e-42 177.2 121 71.1
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.4e-42 176.8 122 74.6
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.9e-42 176.4 122 73.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 1.9e-42 176.4 121 73.6
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 2.4e-42 176.0 121 71.1
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 3.2e-42 175.6 121 73.6
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 4.2e-42 175.3 121 71.9
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.2e-42 175.3 120 73.3
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 4.2e-42 175.3 113 77.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 5.4e-42 174.9 121 72.7
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.1e-42 174.5 121 73.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 7.1e-42 174.5 121 73.6
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 9.3e-42 174.1 122 73.0
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 9.3e-42 174.1 121 71.9
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 9.3e-42 174.1 121 71.9
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 9.3e-42 174.1 121 72.7
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.2e-41 173.7 121 73.6
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.6e-41 173.3 121 71.1
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.6e-41 173.3 121 73.6
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.1e-41 172.9 121 72.7
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 2.1e-41 172.9 121 71.1
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 2.7e-41 172.6 122 71.3
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 4.6e-41 171.8 117 70.9
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 4.6e-41 171.8 121 71.9
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 4.6e-41 171.8 122 72.1
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 6.0e-41 171.4 121 70.2
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.7e-40 169.9 121 69.4
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.3e-40 169.5 121 69.4
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.3e-40 169.5 172 55.2
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 2.3e-40 169.5 121 71.9
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 2.3e-40 169.5 122 70.5
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.3e-40 169.5 121 67.8
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.0e-40 169.1 121 70.2
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.0e-40 169.1 121 70.2
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 6.6e-40 167.9 121 68.6
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 8.7e-40 167.5 113 73.5
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.5e-39 166.8 121 70.2
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.9e-39 166.4 121 66.1
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.9e-39 166.4 120 68.3
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 2.5e-39 166.0 113 71.7
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.5e-39 166.0 121 69.4
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 2.5e-39 166.0 118 70.3
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 2.5e-39 166.0 174 53.4
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.5e-39 166.0 115 70.4
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.3e-39 165.6 125 67.2
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 9.6e-39 164.1 122 69.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 9.6e-39 164.1 177 55.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.3e-38 163.7 113 71.7
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.6e-38 163.3 123 67.5
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 2.1e-38 162.9 128 68.8
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.8e-38 162.5 121 66.1
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 6.2e-38 161.4 124 66.1
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 6.2e-38 161.4 124 66.1
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 8.1e-38 161.0 124 66.1
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.1e-37 160.6 121 69.4
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.4e-37 160.2 123 66.7
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 1.4e-37 160.2 123 66.7
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 1.8e-37 159.8 123 66.7
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 2.4e-37 159.5 123 65.9
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.4e-37 159.5 168 54.2
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 4.0e-37 158.7 122 68.0
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 6.9e-37 157.9 123 65.9
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 6.9e-37 157.9 123 65.9
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 6.9e-37 157.9 121 63.6
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 6.9e-37 157.9 124 65.3
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.0e-36 156.4 121 67.8
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 9.9e-36 154.1 122 63.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.3e-35 153.7 122 63.9
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.2e-35 152.9 122 62.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.2e-35 152.9 121 63.6
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 4.9e-35 151.8 121 64.5
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.4e-34 150.2 123 65.0
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 8.7e-32 141.0 112 62.5
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 3.3e-31 139.0 122 59.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 9.6e-31 137.5 126 59.5
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 9.6e-31 137.5 121 63.6
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 8.1e-30 134.4 121 60.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 8.1e-30 134.4 121 60.3
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.4e-29 133.7 120 60.8
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.1e-29 132.5 122 50.8
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 4.5e-28 128.6 121 60.3
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.7e-27 126.7 180 43.9
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 1.9e-26 123.2 120 53.3
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 4.2e-26 122.1 121 48.8
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 6.0e-25 118.2 112 52.7
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 5.1e-24 115.2 81 64.2
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 5.1e-24 115.2 81 64.2
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 9.6e-23 110.9 86 64.0
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 8.4e-19 97.8 80 58.8
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.1e-18 94.7 59 76.3
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.1e-17 93.2 59 74.6
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.8e-08 63.5 53 58.5
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 8.7e-08 61.2 52 57.7


User provided reference genes

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