Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.3e-104 383.3 224 100.0
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 9.5e-87 323.9 206 90.3
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 4.0e-61 238.8 224 56.7
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 8.9e-61 237.7 226 58.8
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.2e-60 237.3 215 62.3
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.5e-60 236.9 215 58.1
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.6e-60 236.1 215 61.9
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.3e-59 233.8 227 56.8
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.7e-59 233.4 231 56.7
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 3.7e-59 232.3 222 57.2
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 2.4e-58 229.6 209 60.3
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 4.1e-58 228.8 227 56.8
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 7.1e-58 228.0 230 55.7
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.2e-57 227.3 230 55.2
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.6e-57 226.9 219 57.5
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 2.7e-57 226.1 230 54.8
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.7e-57 226.1 220 55.5
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 6.0e-57 224.9 204 57.4
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 3.9e-56 222.2 227 55.5
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 3.9e-56 222.2 215 57.2
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 5.1e-56 221.9 229 57.2
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 5.1e-56 221.9 226 57.5
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.1e-55 220.7 210 57.1
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 1.5e-55 220.3 204 59.8
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 2.5e-55 219.5 225 54.2
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.3e-55 218.8 194 60.8
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 5.6e-55 218.4 228 53.9
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 9.6e-55 217.6 206 59.2
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.2e-54 217.2 235 56.2
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.6e-54 216.9 227 54.6
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 2.8e-54 216.1 229 56.3
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 3.6e-54 215.7 200 59.0
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 4.7e-54 215.3 190 58.9
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 4.7e-54 215.3 222 54.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 4.7e-54 215.3 212 55.2
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 1.1e-53 214.2 223 55.2
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 1.4e-53 213.8 217 52.5
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.8e-53 213.4 227 52.9
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.4e-53 213.0 227 52.4
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 3.1e-53 212.6 199 60.8
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.1e-53 212.6 212 51.9
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 4.0e-53 212.2 227 52.0
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 4.0e-53 212.2 227 52.0
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 6.8e-53 211.5 266 48.1
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 6.8e-53 211.5 227 52.0
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 6.8e-53 211.5 233 51.9
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 6.8e-53 211.5 219 54.8
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.2e-52 210.7 224 52.7
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.2e-52 210.7 227 52.0
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 1.2e-52 210.7 210 54.3
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.5e-52 210.3 239 52.3
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 1.5e-52 210.3 210 54.8
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 2.0e-52 209.9 230 55.2
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 5.8e-52 208.4 227 53.7
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 7.6e-52 208.0 227 50.7
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 7.6e-52 208.0 193 61.1
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 1.3e-51 207.2 209 56.9
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 1.3e-51 207.2 226 54.0
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.3e-51 207.2 237 51.1
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.3e-51 207.2 225 52.9
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 2.9e-51 206.1 227 53.3
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 3.8e-51 205.7 244 52.9
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 4.9e-51 205.3 224 50.9
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 6.4e-51 204.9 239 51.9
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 8.4e-51 204.5 229 54.1
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 1.4e-50 203.8 208 54.8
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 1.4e-50 203.8 235 53.6
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.9e-50 203.4 203 55.7
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 1.9e-50 203.4 213 52.1
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 2.4e-50 203.0 204 54.4
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 2.4e-50 203.0 235 53.2
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 4.2e-50 202.2 214 54.2
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 5.4e-50 201.8 205 52.7
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 5.4e-50 201.8 205 52.7
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 5.4e-50 201.8 205 52.7
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 5.4e-50 201.8 228 53.9
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 7.1e-50 201.4 182 61.0
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 7.1e-50 201.4 228 55.3
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 7.1e-50 201.4 237 54.0
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 9.3e-50 201.1 185 58.4
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 9.3e-50 201.1 246 50.8
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.2e-49 200.7 221 54.3
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 1.6e-49 200.3 182 60.4
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 7.8e-49 198.0 231 50.2
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 1.7e-48 196.8 182 59.9
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 3.0e-48 196.1 184 58.7
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.0e-48 196.1 186 59.1
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.0e-48 196.1 185 60.0
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.0e-48 196.1 185 60.0
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 1.9e-47 193.4 208 55.3
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 2.5e-47 193.0 236 50.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 5.6e-47 191.8 235 52.3
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 7.3e-47 191.4 234 49.1
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.6e-46 190.3 184 58.7
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 1.4e-45 187.2 193 55.4
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 6.9e-45 184.9 263 45.2
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 1.2e-44 184.1 219 51.6
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 9.9e-44 181.0 130 68.5
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.3e-43 180.6 235 47.2
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.7e-43 180.3 227 47.6
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 2.9e-43 179.5 160 56.2
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 3.8e-43 179.1 229 47.6
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 1.2e-41 174.1 242 48.3
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.1e-39 167.5 130 63.1
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.3e-39 166.0 179 55.9
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 2.8e-38 162.9 116 69.0
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 8.1e-38 161.4 127 64.6
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 5.8e-36 155.2 217 46.5
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 5.8e-36 155.2 167 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.7e-35 153.7 188 46.3
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 4.9e-35 152.1 138 59.4
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.4e-34 150.6 160 55.6
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 4.2e-34 149.1 226 42.5
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 4.6e-33 145.6 148 54.1
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 1.0e-32 144.4 184 45.7
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 1.0e-32 144.4 205 45.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 6.7e-32 141.7 165 47.3
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 2.5e-31 139.8 110 65.5
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 9.6e-31 137.9 132 59.1
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 6.2e-30 135.2 203 45.3
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 6.5e-27 125.2 163 45.4
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 7.1e-26 121.7 106 58.5
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.2e-25 120.9 108 59.3
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.3e-22 110.9 161 41.6
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 7.6e-20 101.7 92 55.4
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.4e-13 80.9 104 49.0
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 2.9e-11 73.2 225 29.8
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 3.9e-08 62.8 103 38.8
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 5.7e-07 58.9 83 42.2


User provided reference genes

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