Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 1.6e-67 259.2 127 100.0
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 3.0e-37 158.7 124 59.7
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.9e-37 158.3 124 59.7
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 7.4e-36 154.1 117 59.0
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 9.6e-36 153.7 125 58.4
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 2.1e-35 152.5 125 58.4
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 4.8e-35 151.4 125 56.8
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 1.1e-34 150.2 125 56.8
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 1.4e-34 149.8 123 56.9
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 1.4e-34 149.8 124 55.6
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.4e-34 149.8 125 55.2
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 3.1e-34 148.7 107 61.7
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 1.2e-33 146.7 125 52.0
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.2e-33 146.7 123 56.1
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 1.5e-33 146.4 125 56.0
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 1.5e-33 146.4 115 60.0
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 2.0e-33 146.0 124 56.5
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 5.8e-33 144.4 125 50.4
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 5.8e-33 144.4 119 56.3
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 5.8e-33 144.4 126 54.0
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 7.6e-33 144.1 124 53.2
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.3e-32 143.3 115 58.3
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 1.7e-32 142.9 125 54.4
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.2e-32 142.5 124 51.6
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 2.2e-32 142.5 125 56.0
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 2.9e-32 142.1 108 58.3
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 2.9e-32 142.1 124 51.6
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 2.9e-32 142.1 120 54.2
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 2.9e-32 142.1 126 53.2
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 3.8e-32 141.7 129 53.5
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 4.9e-32 141.4 127 52.0
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 4.9e-32 141.4 117 59.0
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 6.4e-32 141.0 128 53.1
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 8.4e-32 140.6 117 53.0
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.4e-31 139.8 126 53.2
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 2.4e-31 139.0 117 53.0
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 2.4e-31 139.0 114 56.1
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 4.2e-31 138.3 125 52.0
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 7.1e-31 137.5 125 52.8
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 7.1e-31 137.5 116 55.2
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 9.3e-31 137.1 125 50.4
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 9.3e-31 137.1 118 52.5
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 1.6e-30 136.3 125 50.4
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 2.1e-30 136.0 116 55.2
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 2.1e-30 136.0 116 54.3
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 2.1e-30 136.0 125 50.4
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.7e-30 135.6 116 54.3
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 3.5e-30 135.2 123 54.5
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 7.9e-30 134.0 116 53.4
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.0e-29 133.7 117 55.6
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 1.3e-29 133.3 116 52.6
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 3.0e-29 132.1 125 52.8
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 3.9e-29 131.7 117 53.0
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 3.9e-29 131.7 124 52.4
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 6.7e-29 131.0 126 51.6
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 8.7e-29 130.6 114 56.1
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 1.9e-28 129.4 116 52.6
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 2.5e-28 129.0 119 50.4
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 2.5e-28 129.0 119 50.4
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 5.6e-28 127.9 83 66.3
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 6.2e-27 124.4 125 50.4
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 1.1e-26 123.6 79 68.4
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 1.4e-26 123.2 121 47.9
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 2.4e-26 122.5 117 45.3
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 1.2e-25 120.2 115 50.4
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 2.0e-25 119.4 116 49.1
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 2.6e-25 119.0 127 44.9
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 1.3e-24 116.7 120 44.2
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 2.2e-24 115.9 103 49.5
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 1.1e-23 113.6 117 45.3
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 1.9e-23 112.8 86 57.0
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.9e-23 112.8 105 51.4
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 5.5e-23 111.3 124 43.5
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 4.6e-22 108.2 95 47.4
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 6.0e-22 107.8 101 51.5
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 3.0e-21 105.5 101 48.5
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.1e-20 103.6 129 41.9
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 1.6e-19 99.8 72 59.7
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 8.2e-19 97.4 144 37.5
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 2.6e-17 92.4 125 44.8
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 5.9e-17 91.3 149 36.9
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 2.2e-16 89.4 87 47.1
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 3.8e-16 88.6 116 37.9
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 8.5e-16 87.4 116 37.9
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 4.2e-15 85.1 56 64.3
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 8.8e-13 77.4 69 49.3
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 3.3e-12 75.5 55 54.5
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 4.3e-12 75.1 130 36.2
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 4.3e-12 75.1 92 42.4
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 1.3e-11 73.6 74 45.9
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 4.8e-11 71.6 74 48.6
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 7.7e-09 64.3 56 48.2
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 1.7e-08 63.2 62 50.0
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 2.2e-08 62.8 66 48.5
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 3.6e-06 55.5 46 56.5
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 6.1e-06 54.7 34 64.7


User provided reference genes

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