Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 4.2e-49 197.6 92 100.0
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.4e-28 129.4 69 87.0
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.7e-26 122.5 74 74.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 8.5e-26 120.2 64 82.8
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 1.1e-25 119.8 81 66.7
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 4.2e-25 117.9 63 82.5
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 7.2e-25 117.1 77 67.5
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 9.4e-25 116.7 69 78.3
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.2e-24 116.3 65 78.5
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.2e-24 116.3 63 82.5
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.2e-24 116.3 81 65.4
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 1.2e-24 116.3 63 82.5
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 1.6e-24 115.9 72 70.8
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.6e-24 115.9 64 81.2
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 2.1e-24 115.5 73 71.2
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 2.1e-24 115.5 64 78.1
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.1e-24 115.5 65 76.9
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.1e-24 115.5 65 76.9
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 2.1e-24 115.5 70 74.3
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 2.1e-24 115.5 74 70.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 2.7e-24 115.2 73 69.9
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 2.7e-24 115.2 73 69.9
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 3.6e-24 114.8 73 71.2
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 3.6e-24 114.8 73 71.2
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 3.6e-24 114.8 73 69.9
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 3.6e-24 114.8 73 67.1
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 4.7e-24 114.4 73 71.2
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.7e-24 114.4 68 76.5
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.7e-24 114.4 68 76.5
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 6.1e-24 114.0 77 70.1
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 6.1e-24 114.0 74 68.9
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 6.1e-24 114.0 76 67.1
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 6.1e-24 114.0 76 67.1
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 6.1e-24 114.0 63 81.0
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 6.1e-24 114.0 67 74.6
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 8.0e-24 113.6 73 69.9
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 8.0e-24 113.6 66 74.2
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 8.0e-24 113.6 66 74.2
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 8.0e-24 113.6 63 81.0
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 8.0e-24 113.6 63 81.0
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 8.0e-24 113.6 64 78.1
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 8.0e-24 113.6 64 78.1
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 1.0e-23 113.2 63 79.4
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.0e-23 113.2 63 81.0
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.0e-23 113.2 63 81.0
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.4e-23 112.8 72 68.1
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.8e-23 112.5 63 77.8
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.8e-23 112.5 73 71.2
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.8e-23 112.5 65 76.9
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 1.8e-23 112.5 63 81.0
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 2.3e-23 112.1 84 63.1
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 3.0e-23 111.7 64 75.0
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.0e-23 111.7 61 82.0
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 4.0e-23 111.3 63 77.8
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 4.0e-23 111.3 66 74.2
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 5.2e-23 110.9 65 76.9
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 5.2e-23 110.9 63 77.8
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 6.8e-23 110.5 63 77.8
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 6.8e-23 110.5 76 65.8
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 6.8e-23 110.5 76 65.8
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 6.8e-23 110.5 73 68.5
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 6.8e-23 110.5 66 74.2
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 6.8e-23 110.5 63 77.8
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 6.8e-23 110.5 63 77.8
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 6.8e-23 110.5 63 77.8
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 8.8e-23 110.2 84 63.1
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 8.8e-23 110.2 77 66.2
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 8.8e-23 110.2 66 77.3
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 8.8e-23 110.2 63 76.2
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 8.8e-23 110.2 63 77.8
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 1.2e-22 109.8 63 77.8
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.5e-22 109.4 63 77.8
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.5e-22 109.4 63 77.8
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 1.5e-22 109.4 74 64.9
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.6e-22 108.6 77 66.2
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 2.6e-22 108.6 61 80.3
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.4e-22 108.2 65 76.9
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.4e-22 108.2 65 76.9
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 3.4e-22 108.2 63 77.8
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 3.4e-22 108.2 63 76.2
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 4.4e-22 107.8 79 65.8
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 5.7e-22 107.5 76 60.5
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 5.7e-22 107.5 63 74.6
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 7.5e-22 107.1 68 72.1
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 9.8e-22 106.7 79 64.6
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 1.3e-21 106.3 63 73.0
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 2.2e-21 105.5 63 74.6
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 2.2e-21 105.5 73 65.8
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.7e-21 104.8 74 66.2
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 3.7e-21 104.8 63 77.8
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 8.3e-21 103.6 72 68.1
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.1e-20 103.2 77 63.6
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 1.8e-20 102.4 74 63.5
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.4e-20 102.1 79 60.8
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 4.1e-20 101.3 79 62.0
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 7.7e-19 97.1 70 60.0
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 7.7e-19 97.1 63 69.8
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 1.7e-18 95.9 67 64.2
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 3.2e-17 91.7 73 56.2
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.0e-14 82.4 63 58.7
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 2.0e-11 72.4 46 69.6
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.7e-10 69.3 69 46.4
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.3e-10 68.9 50 60.0
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 6.6e-10 67.4 76 48.7


User provided reference genes

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