Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.4e-248 862.4 436 100.0
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 4.6e-178 628.2 440 70.9
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 5.4e-171 604.7 439 69.7
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.3e-169 600.1 436 69.0
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 8.6e-169 597.4 441 68.0
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 7.3e-168 594.3 435 67.8
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 9.5e-168 594.0 437 68.0
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 6.2e-167 591.3 441 68.0
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 1.4e-166 590.1 435 68.0
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.4e-166 589.3 448 67.4
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 2.4e-166 589.3 441 67.3
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.1e-166 589.0 441 68.0
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 5.2e-166 588.2 431 69.1
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 3.4e-165 585.5 437 68.4
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.8e-165 584.7 443 67.5
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 2.2e-164 582.8 441 66.4
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 3.8e-164 582.0 442 67.2
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 6.4e-164 581.3 428 68.9
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.4e-164 581.3 434 68.4
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 8.4e-164 580.9 431 67.5
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.4e-163 579.3 435 67.8
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 9.2e-163 577.4 436 65.1
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 2.7e-162 575.9 440 67.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.7e-162 575.9 435 67.1
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 3.5e-162 575.5 444 67.3
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.0e-161 573.9 428 66.8
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.0e-161 573.9 428 67.1
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 1.3e-161 573.5 429 66.4
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.0e-161 572.4 431 67.7
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.0e-161 572.4 427 68.1
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 5.1e-161 571.6 435 67.8
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 5.1e-161 571.6 438 66.7
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 5.1e-161 571.6 426 67.6
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 6.6e-161 571.2 432 67.1
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 6.6e-161 571.2 429 66.2
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 6.6e-161 571.2 433 67.0
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 6.6e-161 571.2 444 65.1
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 1.1e-160 570.5 442 64.7
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.5e-160 570.1 429 66.7
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.9e-160 569.7 441 66.2
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 3.3e-160 568.9 448 65.8
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 3.3e-160 568.9 440 66.8
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 5.6e-160 568.2 436 66.3
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 5.6e-160 568.2 437 66.6
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 5.6e-160 568.2 430 66.0
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 5.6e-160 568.2 428 66.8
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 7.3e-160 567.8 437 67.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 7.3e-160 567.8 464 64.0
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.3e-159 567.0 442 64.5
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.3e-159 567.0 428 67.1
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 1.3e-159 567.0 444 64.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 4.8e-159 565.1 450 63.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 8.1e-159 564.3 443 65.2
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 8.1e-159 564.3 440 65.7
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.1e-158 563.9 444 66.4
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.1e-158 563.9 443 64.6
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.8e-158 563.1 445 62.0
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.8e-158 563.1 433 67.2
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 1.8e-158 563.1 450 63.3
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 6.9e-158 561.2 438 65.1
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 1.2e-157 560.5 431 66.6
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.2e-157 560.5 442 65.6
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.5e-157 560.1 438 65.5
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 1.5e-157 560.1 443 64.1
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 2.0e-157 559.7 440 64.8
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.6e-157 559.3 441 65.5
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 4.4e-157 558.5 439 65.1
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 5.8e-157 558.1 437 64.8
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.4e-155 552.7 434 65.4
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.4e-155 552.7 434 65.4
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 7.1e-155 551.2 436 65.1
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 7.1e-155 551.2 442 64.9
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.8e-154 547.7 441 63.7
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 1.0e-153 547.4 430 64.0
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 1.3e-153 547.0 434 63.8
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 1.3e-153 547.0 434 63.8
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.6e-151 540.0 461 61.6
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.1e-151 539.7 444 62.8
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 2.1e-151 539.7 435 63.4
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 4.8e-151 538.5 432 63.2
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.2e-151 538.1 434 63.4
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 5.3e-150 535.0 449 61.5
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 4.5e-149 531.9 444 61.9
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 3.8e-148 528.9 433 63.5
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.5e-146 522.3 441 59.0
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 7.9e-146 521.2 432 63.2
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 3.9e-145 518.8 444 62.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 9.6e-144 514.2 368 67.4
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.1e-142 510.8 445 61.1
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 1.2e-141 507.3 441 61.0
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 5.8e-141 505.0 433 59.1
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.2e-139 499.2 450 58.4
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 3.2e-139 499.2 500 56.2
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 2.1e-138 496.5 387 64.9
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 8.7e-137 491.1 347 70.9
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 5.7e-136 488.4 446 59.0
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.4e-134 483.0 434 59.0
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.3e-129 466.5 348 67.5
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 3.0e-129 466.1 344 66.9
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 4.1e-126 455.7 433 55.2
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 1.3e-124 450.7 439 51.9
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.1e-123 447.6 444 50.0
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 1.2e-122 444.1 368 63.9
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 2.3e-121 439.9 434 50.9
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 9.7e-120 434.5 361 60.4
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-118 430.3 437 50.1
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 2.6e-117 426.4 443 54.4
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 3.4e-117 426.0 436 53.7
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 1.0e-113 414.5 328 63.1
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 3.9e-113 412.5 304 66.4
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 6.3e-103 378.6 295 66.8
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-89 334.0 312 51.9
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 1.5e-88 330.9 451 43.0
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.6e-72 276.9 208 68.8
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 3.5e-69 266.5 274 56.6
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.3e-68 264.6 237 54.0
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 3.1e-65 253.4 215 56.7
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 6.2e-42 176.0 150 60.0
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.3e-39 168.3 415 31.6
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-35 153.3 205 45.4
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 6.0e-29 132.9 102 64.7
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.2e-24 118.6 115 53.0
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 8.4e-23 112.5 424 27.8
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 3.0e-20 104.0 129 41.9
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 2.8e-18 97.4 62 69.4
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 1.4e-17 95.1 99 48.5
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 1.4e-09 68.6 64 53.1
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.1e-09 67.4 92 43.5
Cfa022434 Carpinus fangiana HOM05D006332 ORTHO05D121602 3.4e-08 63.9 287 24.7


User provided reference genes

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