Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 3.0e-148 528.5 268 100.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.3e-62 242.7 276 51.4
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.8e-61 239.6 267 52.8
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 8.2e-61 238.0 275 50.2
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 6.9e-60 235.0 277 48.7
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.5e-59 233.8 265 52.5
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 2.0e-59 233.4 267 49.8
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.0e-58 231.1 272 50.0
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.3e-58 230.7 274 50.0
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 6.5e-58 228.4 264 49.6
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 8.5e-58 228.0 269 49.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 1.1e-57 227.6 274 47.8
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.4e-57 227.3 263 50.6
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 4.2e-57 225.7 273 48.0
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 5.5e-57 225.3 261 51.3
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.5e-57 225.3 261 51.3
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.6e-56 223.8 266 51.5
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.6e-56 222.6 261 50.6
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 7.9e-56 221.5 276 46.7
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 1.0e-55 221.1 263 49.0
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.8e-55 220.3 279 47.3
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.8e-55 220.3 279 47.3
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.8e-55 220.3 269 48.3
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 2.3e-55 219.9 264 48.9
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.0e-55 219.5 270 48.5
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 8.8e-55 218.0 343 42.3
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.5e-54 217.2 265 47.9
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.5e-54 216.5 264 48.5
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.7e-54 215.3 268 47.8
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 5.7e-54 215.3 271 47.6
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 9.7e-54 214.5 266 46.2
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 1.3e-53 214.2 255 47.8
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.3e-53 214.2 281 46.6
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.7e-53 213.8 270 45.6
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.7e-53 212.6 291 45.4
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.1e-52 211.1 255 49.0
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.8e-52 210.3 271 46.5
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 3.1e-52 209.5 267 47.9
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.9e-52 208.4 267 47.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 9.1e-52 208.0 217 51.6
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 9.1e-52 208.0 267 47.2
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.5e-51 207.2 262 46.9
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 1.5e-51 207.2 255 51.4
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 4.5e-51 205.7 279 45.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 7.7e-51 204.9 282 44.7
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 1.0e-50 204.5 265 47.9
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.3e-50 204.1 256 47.3
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 1.7e-50 203.8 274 44.2
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.7e-50 203.8 267 48.3
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 5.0e-50 202.2 265 46.8
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 5.0e-50 202.2 257 48.6
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 6.5e-50 201.8 258 46.9
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.4e-49 200.7 274 43.8
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 1.9e-49 200.3 265 46.0
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 2.5e-49 199.9 265 46.8
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 3.2e-49 199.5 289 45.7
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 4.2e-49 199.1 267 45.3
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 7.2e-49 198.4 266 44.4
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 7.2e-49 198.4 267 46.1
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 7.2e-49 198.4 268 44.4
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 9.4e-49 198.0 267 45.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 9.4e-49 198.0 275 44.0
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 9.4e-49 198.0 257 46.7
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.6e-48 197.2 261 48.3
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.6e-48 197.2 273 45.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.6e-48 197.2 273 45.1
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 2.1e-48 196.8 266 44.0
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.1e-48 196.8 267 46.1
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.7e-48 196.4 263 46.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.7e-48 196.4 263 46.0
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 3.6e-48 196.1 267 45.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 3.6e-48 196.1 267 45.3
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.7e-48 195.7 265 45.7
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 6.1e-48 195.3 271 48.0
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 1.4e-47 194.1 249 46.6
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.4e-47 194.1 265 44.9
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.8e-47 193.7 256 50.0
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 3.0e-47 193.0 267 44.9
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 3.0e-47 193.0 260 46.5
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 5.1e-47 192.2 270 44.8
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.1e-46 191.0 271 44.3
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.1e-46 191.0 259 45.6
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.0e-46 190.3 212 51.4
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.6e-46 189.9 261 47.1
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.3e-46 189.5 260 46.9
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 4.4e-46 189.1 272 42.6
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.3e-45 187.6 260 46.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.3e-45 187.6 256 48.0
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 3.7e-45 186.0 276 43.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 8.2e-45 184.9 269 43.9
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 5.0e-42 175.6 246 43.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.5e-35 152.9 218 46.3
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.7e-32 143.3 106 67.0
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 6.1e-32 142.1 99 67.7
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 8.0e-32 141.7 99 66.7
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.8e-31 140.6 248 39.1
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 4.4e-30 136.0 100 63.0
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 7.5e-30 135.2 96 76.0
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.7e-27 126.7 221 38.9
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.1e-24 117.1 268 32.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 6.1e-24 115.5 85 62.4
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.4e-23 114.4 270 33.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 3.1e-20 103.2 269 32.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 7.0e-20 102.1 88 59.1
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 5.0e-18 95.9 76 60.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.9e-17 94.0 94 53.2
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 1.9e-17 94.0 70 62.9
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.4e-15 87.8 107 48.6
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 5.2e-15 85.9 78 56.4
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.2e-14 84.7 104 52.9
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 3.4e-14 83.2 63 58.7
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.2e-13 80.5 63 63.5
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.5e-11 73.2 65 56.9
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.9e-10 69.7 132 37.1
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.8e-07 58.9 244 27.5


User provided reference genes

Program Settings