Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0093 Ceratophyllum demersum HOM05D003039 ORTHO05D009478 2.7e-68 262.7 236 100.0
CDE08G1283 Ceratophyllum demersum HOM05D003039 ORTHO05D009478 5.1e-67 258.5 236 80.1
Ah.10g033630 Amaranthus hybridus HOM05D003039 ORTHO05D009478 4.0e-35 152.5 102 68.6
Aqoxy7G03329 Aquilegia oxysepala HOM05D003039 ORTHO05D009478 6.8e-35 151.8 244 71.7
EL10Ac8g19260 Beta vulgaris HOM05D003039 ORTHO05D009478 2.0e-34 150.2 102 69.6
DCAR_017780 Daucus carota HOM05D003039 ORTHO05D009478 1.7e-33 147.1 264 65.2
Sc05g0000230 Simmondsia chinensis HOM05D003039 ORTHO05D009478 2.9e-33 146.4 90 76.7
Manes.10G117700 Manihot esculenta HOM05D003039 ORTHO05D009478 4.9e-33 145.6 104 68.3
MD08G1216300 Malus domestica HOM05D003039 ORTHO05D009478 6.4e-33 145.2 102 68.6
Sabra07G0066600 Salix brachista HOM05D003039 ORTHO05D009478 8.3e-33 144.8 86 76.7
TPR.G3049 Trifolium pratense HOM05D003039 ORTHO05D009478 1.8e-32 143.7 96 69.8
MELO3C012922.2 Cucumis melo HOM05D003039 ORTHO05D009478 4.1e-32 142.5 269 64.3
CsaV3_3G031700 Cucumis sativus L. HOM05D003039 ORTHO05D009478 4.1e-32 142.5 246 71.1
FvH4_5g32610 Fragaria vesca HOM05D003039 ORTHO05D009478 5.4e-32 142.1 102 64.7
Oeu051493.1 Olea europaea HOM05D003039 ORTHO05D009478 5.4e-32 142.1 86 77.9
MSTRG.18804 Avicennia marina HOM05D003039 ORTHO05D009478 7.0e-32 141.7 90 72.2
Cc01_g08170 Coffea canephora HOM05D003039 ORTHO05D009478 7.0e-32 141.7 84 79.8
Prupe.1G549200 Prunus persica HOM05D003039 ORTHO05D009478 7.0e-32 141.7 99 68.7
AUR62020699 Chenopodium quinoa HOM05D003039 ORTHO05D009478 9.2e-32 141.4 102 63.7
AUR62028025 Chenopodium quinoa HOM05D003039 ORTHO05D009478 1.2e-31 141.0 102 63.7
RcHm_v2.0_Chr7g0230241 Rosa chinensis HOM05D003039 ORTHO05D009478 1.6e-31 140.6 101 64.4
Ca_10260_v3 Cicer arietinum L. HOM05D003039 ORTHO05D009478 2.0e-31 140.2 84 76.2
FAN08G2236 Fragaria x ananassa HOM05D003039 ORTHO05D009478 2.0e-31 140.2 101 65.3
Rhsim01G0292600 Rhododendron simsii HOM05D003039 ORTHO05D009478 4.6e-31 139.0 93 71.0
CSS0027768 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D009478 5.9e-31 138.7 103 67.0
ClCG10G011660 Citrullus lanatus HOM05D003039 ORTHO05D009478 5.9e-31 138.7 267 65.5
FAN18G3877 Fragaria x ananassa HOM05D003039 ORTHO05D009478 5.9e-31 138.7 86 72.1
Potri.007G079400 Populus trichocarpa HOM05D003039 ORTHO05D009478 5.9e-31 138.7 86 73.3
Duzib138G0793 Durio zibethinus HOM05D003039 ORTHO05D009478 1.0e-30 137.9 89 69.7
Peaxi162Scf00217g00003 Petunia axillaris HOM05D003039 ORTHO05D009478 1.3e-30 137.5 86 74.4
QL12p038622 Quercus lobata HOM05D003039 ORTHO05D009478 1.3e-30 137.5 103 62.1
Lj2P868T14 Lonicera japonica HOM05D003039 ORTHO05D009478 2.3e-30 136.7 100 67.0
SalBow6G4384 Salvia bowleyana HOM05D003039 ORTHO05D009478 3.0e-30 136.3 84 76.2
PGSC0003DMG400003011 Solanum tuberosum HOM05D003039 ORTHO05D009478 3.0e-30 136.3 94 70.2
Thecc.01G320000 Theobroma cacao HOM05D003039 ORTHO05D009478 3.9e-30 136.0 252 68.7
Lj2P848T5 Lonicera japonica HOM05D003039 ORTHO05D009478 6.6e-30 135.2 100 67.0
Manes.04G149800 Manihot esculenta HOM05D003039 ORTHO05D009478 8.6e-30 134.8 81 77.8
Nitab4.5_0009560g0010 Nicotiana tabacum HOM05D003039 ORTHO05D009478 1.1e-29 134.4 94 69.1
Nitab4.5_0008410g0010 Nicotiana tabacum HOM05D003039 ORTHO05D009478 1.5e-29 134.0 94 69.1
Atru.chr5.926 Acer truncatum HOM05D003039 ORTHO05D009478 2.5e-29 133.3 86 73.3
CANSAT80G0566 Cannabis sativa HOM05D003039 ORTHO05D009478 2.5e-29 133.3 84 75.0
CAN.G439.2 Capsicum annuum HOM05D003039 ORTHO05D009478 2.5e-29 133.3 100 64.0
COL.COLO4_23183 Corchorus olitorius HOM05D003039 ORTHO05D009478 5.6e-29 132.1 83 74.7
Sopen11g029340 Solanum pennellii HOM05D003039 ORTHO05D009478 7.3e-29 131.7 94 68.1
Eucgr.G01126 Eucalyptus grandis HOM05D003039 ORTHO05D009478 9.5e-29 131.3 82 74.4
Solyc11g071670.2 Solanum lycopersicum HOM05D003039 ORTHO05D009478 9.5e-29 131.3 94 68.1
SGA_v2.0_scaffold7G04017 Striga asiatica HOM05D003039 ORTHO05D009478 9.5e-29 131.3 83 73.5
MBI19_g32692_MAGBIO Magnolia biondii HOM05D003039 ORTHO05D009478 1.6e-28 130.6 89 69.7
Sed0013624 Sechium edule HOM05D003039 ORTHO05D009478 2.1e-28 130.2 103 62.1
Cpa.g.sc932.1 Carica papaya HOM05D003039 ORTHO05D009478 2.8e-28 129.8 94 67.0
Eucgr.G01125 Eucalyptus grandis HOM05D003039 ORTHO05D009478 3.6e-28 129.4 82 73.2
Dinv36297 Davidia involucrata HOM05D003039 ORTHO05D009478 6.2e-28 128.6 84 72.6
PGR031G3850 Punica granatum HOM05D003039 ORTHO05D009478 1.0e-27 127.9 80 75.0
Ciclev10019795m.g Citrus clementina HOM05D003039 ORTHO05D009478 1.4e-27 127.5 86 69.8
Carub.0001s0150 Capsella rubella HOM05D003039 ORTHO05D009478 3.1e-27 126.3 84 66.7
C03p00150 Brassica napus HOM05D003039 ORTHO05D009478 5.2e-27 125.6 83 68.7
Gohir.D11G112400 Gossypium hirsutum HOM05D003039 ORTHO05D009478 5.2e-27 125.6 77 76.6
BolC3t12581H Brassica oleracea HOM05D003039 ORTHO05D009478 8.9e-27 124.8 83 68.7
Actinidia25867 Actinidia chinensis HOM05D003039 ORTHO05D009478 1.2e-26 124.4 271 65.3
Gohir.A11G107600 Gossypium hirsutum HOM05D003039 ORTHO05D009478 2.0e-26 123.6 76 76.3
Gorai.007G120700 Gossypium raimondii HOM05D003039 ORTHO05D009478 2.0e-26 123.6 76 76.3
Lj5g0022385 Lotus japonicus HOM05D003039 ORTHO05D009478 2.6e-26 123.2 72 80.6
CARHR001750 Cardamine hirsuta HOM05D003039 ORTHO05D009478 3.4e-26 122.9 84 64.3
AT1G02420 Arabidopsis thaliana HOM05D003039 ORTHO05D009478 5.8e-26 122.1 83 65.1
Cfa004857 Carpinus fangiana HOM05D003039 ORTHO05D009478 7.5e-26 121.7 79 72.2
Aa31LG1G10060 Aethionema arabicum HOM05D003039 ORTHO05D009478 1.7e-25 120.6 85 65.9
BcaB03g13512 Brassica carinata HOM05D003039 ORTHO05D009478 2.9e-25 119.8 83 65.1
Psat6g159720 Pisum sativum HOM05D003039 ORTHO05D009478 3.7e-25 119.4 74 75.7
TAR636G0541 Trochodendron aralioides HOM05D003039 ORTHO05D009478 3.7e-25 119.4 267 64.4
Lalb_Chr02g0146981 Lupinus albus HOM05D003039 ORTHO05D009478 6.4e-25 118.6 72 76.4
Os03g0208600 Oryza sativa ssp. japonica HOM05D003039 ORTHO05D009478 6.4e-25 118.6 82 67.1
Nn2g12694 Nelumbo nucifera HOM05D003039 ORTHO05D009478 1.4e-24 117.5 84 67.9
TWI14G0220 Tripterygium wilfordii HOM05D003039 ORTHO05D009478 1.4e-24 117.5 89 61.8
Aa31LG1G10080 Aethionema arabicum HOM05D003039 ORTHO05D009478 1.9e-24 117.1 85 64.7
Zm00001eb007190 Zea mays HOM05D003039 ORTHO05D009478 7.0e-24 115.2 89 59.6
Haze_05093 Corylus avellana HOM05D003039 ORTHO05D009478 1.2e-23 114.4 75 72.0
VMungo1127G0634 Vigna mungo HOM05D003039 ORTHO05D009478 2.0e-23 113.6 90 63.3
CiPaw.07G121100 Carya illinoinensis HOM05D003039 ORTHO05D009478 3.5e-23 112.8 75 72.0
HPP92_015243 Vanilla planifolia HOM05D003039 ORTHO05D009478 4.6e-23 112.5 72 69.4
ATR0693G157 Amborella trichopoda HOM05D003039 ORTHO05D009478 6.0e-23 112.1 77 68.8
AL1G11782 Arabidopsis lyrata HOM05D003039 ORTHO05D009478 1.0e-22 111.3 75 66.7
SHI34114 Sapria himalayana HOM05D003039 ORTHO05D009478 1.9e-21 107.1 71 67.6
Thhalv10007463m.g Eutrema salsugineum HOM05D003039 ORTHO05D009478 2.5e-21 106.7 70 70.0
Migut.D02462 Erythranthe guttata HOM05D003039 ORTHO05D009478 5.6e-21 105.5 215 74.9
Manes.05G012004 Manihot esculenta HOM05D003039 ORTHO05D009478 1.6e-20 104.0 269 47.6
A08p37670 Brassica napus HOM05D003039 ORTHO05D009478 1.8e-19 100.5 68 67.6
BraA08t35663Z Brassica rapa HOM05D003039 ORTHO05D009478 1.8e-19 100.5 68 67.6
BcaB01g06135 Brassica carinata HOM05D003039 ORTHO05D009478 4.0e-19 99.4 83 57.8
Hma1.2p1_0143F.1_g064525 Hydrangea macrophylla HOM05D003039 ORTHO05D009478 2.4e-16 90.1 85 54.1
Sp1g01510 Schrenkiella parvula HOM05D003039 ORTHO05D009478 6.0e-15 85.5 68 60.3
THA.LOC104815916 Tarenaya hassleriana HOM05D003039 ORTHO05D009478 3.9e-14 82.8 72 56.9
Lj2P866T8 Lonicera japonica HOM05D003039 ORTHO05D019456 6.4e-09 65.5 41 61.0
BcaB01g06132 Brassica carinata HOM05D003039 ORTHO05D009478 2.7e-07 60.1 41 61.0
Phvul.011G069000 Phaseolus vulgaris HOM05D003039 ORTHO05D009478 7.8e-07 58.5 36 72.2
Medtr1g086500 Medicago truncatula HOM05D003039 ORTHO05D009478 1.3e-06 57.8 36 66.7


User provided reference genes

Program Settings