Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 5.2e-170 600.9 292 100.0
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 7.2e-95 351.3 245 67.8
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.6e-94 350.1 232 71.1
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 2.1e-94 349.7 261 65.1
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.4e-93 347.1 230 71.3
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 2.3e-93 346.3 233 70.0
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.4e-92 342.0 242 66.5
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 4.4e-92 342.0 242 66.5
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 5.7e-92 341.7 244 66.4
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 2.8e-91 339.3 245 64.1
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 2.8e-91 339.3 233 67.4
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 4.8e-91 338.6 232 66.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.1e-90 337.4 235 65.5
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 2.4e-90 336.3 240 65.8
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 3.1e-90 335.9 233 67.4
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 3.1e-90 335.9 244 64.3
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.1e-90 335.5 246 63.8
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.1e-90 335.5 244 64.8
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 5.4e-90 335.1 232 65.9
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 5.4e-90 335.1 235 66.0
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 7.0e-90 334.7 215 71.6
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 7.0e-90 334.7 233 66.5
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 9.1e-90 334.3 235 66.4
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.6e-89 333.6 229 68.1
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 2.0e-89 333.2 228 67.1
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 7.7e-89 331.3 231 67.1
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.3e-88 330.5 243 65.0
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.3e-88 330.5 243 63.4
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 1.7e-88 330.1 235 65.5
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.7e-88 330.1 232 66.8
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 2.9e-88 329.3 237 65.8
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 8.5e-88 327.8 234 65.4
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.1e-87 327.4 232 62.5
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 1.1e-87 327.4 232 62.5
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.9e-87 326.6 230 65.2
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 5.5e-87 325.1 230 64.3
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 7.2e-87 324.7 230 63.9
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 9.5e-87 324.3 267 59.6
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 2.1e-86 323.2 235 63.4
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 1.0e-85 320.9 231 63.2
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.0e-85 320.9 239 62.8
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.4e-85 320.5 231 64.5
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.8e-85 320.1 231 64.1
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 5.2e-85 318.5 244 61.9
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 5.2e-85 318.5 232 63.4
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 6.8e-85 318.2 271 57.6
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 8.8e-85 317.8 234 63.2
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 8.8e-85 317.8 231 64.1
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 8.8e-85 317.8 230 63.0
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 8.8e-85 317.8 232 64.2
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 8.8e-85 317.8 233 63.1
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.5e-84 317.0 233 64.4
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.5e-84 317.0 251 61.4
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 2.6e-84 316.2 234 59.4
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 3.4e-84 315.8 239 62.3
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 4.4e-84 315.5 234 62.0
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 4.4e-84 315.5 233 62.2
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 7.5e-84 314.7 243 63.0
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 7.5e-84 314.7 230 62.6
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 9.8e-84 314.3 241 58.1
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 9.8e-84 314.3 235 63.0
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 2.2e-83 313.2 237 62.0
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 3.7e-83 312.4 242 60.7
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 4.9e-83 312.0 236 61.4
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.1e-82 310.8 241 60.6
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.8e-82 310.1 234 62.0
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 2.4e-82 309.7 235 61.3
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 4.1e-82 308.9 234 61.5
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 4.1e-82 308.9 236 61.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 5.4e-82 308.5 234 61.1
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.2e-81 307.4 234 60.7
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.2e-81 307.4 237 61.6
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.6e-81 307.0 291 52.6
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.7e-81 306.2 235 60.0
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 2.3e-80 303.1 219 61.6
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 3.8e-80 302.4 230 60.4
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 3.3e-79 299.3 230 60.0
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 3.3e-79 299.3 232 59.5
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 5.6e-79 298.5 218 61.0
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 5.6e-79 298.5 234 58.5
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.2e-78 297.4 254 57.1
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.3e-75 287.3 192 66.7
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 7.8e-73 278.1 191 65.4
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 2.1e-70 270.0 214 55.6
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.6e-70 269.2 181 67.4
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 3.4e-68 262.7 271 51.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 7.3e-63 245.0 229 48.5
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 8.1e-62 241.5 163 68.1
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 9.8e-60 234.6 208 52.4
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 2.2e-59 233.4 205 51.7
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 8.3e-59 231.5 188 60.6
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 2.4e-58 229.9 152 68.4
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 2.1e-57 226.9 146 69.2
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 2.8e-54 216.5 161 59.6
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.3e-51 207.6 144 67.4
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 4.9e-51 205.7 139 69.1
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 3.6e-46 189.5 150 59.3
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 3.1e-45 186.4 140 62.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.0e-45 186.0 129 63.6
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.4e-42 175.6 131 64.9
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.4e-42 175.6 131 64.9
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.1e-41 173.7 137 61.3
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 7.9e-33 145.2 205 37.6
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 7.4e-31 138.7 94 66.0
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 2.7e-25 120.2 262 33.6
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 1.8e-24 117.5 164 41.5
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 3.0e-24 116.7 77 66.2
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 9.3e-18 95.1 119 42.9
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 6.3e-14 82.4 57 59.6
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 1.4e-13 81.3 45 77.8
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 1.2e-12 78.2 146 31.5
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-12 77.4 43 76.7
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-12 77.4 43 76.7
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 2.5e-10 70.5 48 64.6
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 2.5e-10 70.5 48 64.6
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.3e-08 63.9 38 73.7
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.3e-08 63.9 38 73.7
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 3.9e-08 63.2 43 60.5
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 8.7e-08 62.0 80 43.8
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.5e-07 61.2 52 57.7
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.5e-07 60.5 77 44.2
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 2.5e-07 60.5 76 42.1


User provided reference genes

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